RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 GYG2O15488 501 aa11.84□□□□□ -0.51
USP6NL-202ENST00000379237 TOB1P50616 345 aaPredicted RBP11.84□□□□□ -0.51
USP6NL-202ENST00000379237 STRN3Q13033 797 aa11.84□□□□□ -0.51
USP6NL-202ENST00000379237 ADAM9Q13443 819 aa11.84□□□□□ -0.51
USP6NL-202ENST00000379237 SLC29A2Q14542 456 aa11.84□□□□□ -0.51
USP6NL-202ENST00000379237 VWA3BQ502W6 1294 aa11.84□□□□□ -0.51
USP6NL-202ENST00000379237 KLHDC7AQ5VTJ3 777 aa11.84□□□□□ -0.51
USP6NL-202ENST00000379237 ANO7Q6IWH7 933 aa11.84□□□□□ -0.51
USP6NL-202ENST00000379237 ZNF653Q96CK0 615 aa11.84□□□□□ -0.51
USP6NL-202ENST00000379237 CEP63Q96MT8 703 aa11.84□□□□□ -0.51
USP6NL-202ENST00000379237 TRAPPC9Q96Q05 1148 aa11.84□□□□□ -0.51
USP6NL-202ENST00000379237 TTC1Q99614 292 aa11.84□□□□□ -0.51
USP6NL-202ENST00000379237 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.84□□□□□ -0.515e-7■■□□□ 13.2
USP6NL-202ENST00000379237 PREBQ9HCU5 417 aa11.84□□□□□ -0.51
USP6NL-202ENST00000379237 ARPP21Q9UBL0 812 aaPredicted RBP11.84□□□□□ -0.51
USP6NL-202ENST00000379237 MTUS1Q9ULD2 1270 aa11.84□□□□□ -0.51
USP6NL-202ENST00000379237 DCTN3O75935 186 aa11.84□□□□□ -0.51
USP6NL-202ENST00000379237 TROVE2P10155 538 aaKnown RBP eCLIP11.84□□□□□ -0.51
USP6NL-202ENST00000379237 MAN2A1Q16706 1144 aa11.84□□□□□ -0.51
USP6NL-202ENST00000379237 RUNDC3BQ96NL0 473 aa11.84□□□□□ -0.51
USP6NL-202ENST00000379237 DDX50Q9BQ39 737 aaKnown RBP11.84□□□□□ -0.51
USP6NL-202ENST00000379237 NT5C3AQ9H0P0 336 aa11.84□□□□□ -0.51
USP6NL-202ENST00000379237 SLC12A6Q9UHW9 1150 aa11.84□□□□□ -0.51
USP6NL-202ENST00000379237 PDS5AQ29RF7 1337 aaKnown RBP11.84□□□□□ -0.51
USP6NL-202ENST00000379237 F8VZ95 297 aa11.84□□□□□ -0.51
USP6NL-202ENST00000379237 EYA2O00167 538 aa11.84□□□□□ -0.51
USP6NL-202ENST00000379237 CAPN9O14815 690 aa11.84□□□□□ -0.51
USP6NL-202ENST00000379237 EEF2P13639 858 aaKnown RBP11.84□□□□□ -0.51
USP6NL-202ENST00000379237 ACADSP16219 412 aa11.84□□□□□ -0.51
USP6NL-202ENST00000379237 TATP17735 454 aaPredicted RBP11.84□□□□□ -0.51
USP6NL-202ENST00000379237 KLRC1P26715 233 aa11.84□□□□□ -0.51
USP6NL-202ENST00000379237 MCL1Q07820 350 aa11.84□□□□□ -0.51
USP6NL-202ENST00000379237 HSP90AA5PQ58FG0 334 aa11.84□□□□□ -0.51
USP6NL-202ENST00000379237 U2AF1L4Q8WU68 220 aaKnown RBP11.84□□□□□ -0.51
USP6NL-202ENST00000379237 PRPF31Q8WWY3 499 aaKnown RBP11.84□□□□□ -0.51
USP6NL-202ENST00000379237 ESR2Q92731 530 aa11.84□□□□□ -0.51
USP6NL-202ENST00000379237 SYT15Q9BQS2 421 aa11.84□□□□□ -0.51
USP6NL-202ENST00000379237 POGZQ7Z3K3 1410 aa11.84□□□□□ -0.51
USP6NL-202ENST00000379237 FAM237AA0A1B0GTK4 181 aa11.83□□□□□ -0.51
USP6NL-202ENST00000379237 TMEM120BA0PK00 339 aa11.83□□□□□ -0.51
USP6NL-202ENST00000379237 PRAMEF22A3QJZ6 481 aa11.83□□□□□ -0.51
USP6NL-202ENST00000379237 SNX3O60493 162 aa11.83□□□□□ -0.51
USP6NL-202ENST00000379237 SERPING1P05155 500 aa11.83□□□□□ -0.51
USP6NL-202ENST00000379237 IFI35P80217 286 aaPredicted RBP11.83□□□□□ -0.51
USP6NL-202ENST00000379237 RNASELQ05823 741 aaKnown RBP11.83□□□□□ -0.51
USP6NL-202ENST00000379237 P3H1Q32P28 736 aa11.83□□□□□ -0.51
USP6NL-202ENST00000379237 AKNAD1Q5T1N1 836 aa11.83□□□□□ -0.51
USP6NL-202ENST00000379237 SNX30Q5VWJ9 437 aa11.83□□□□□ -0.51
USP6NL-202ENST00000379237 SRRM1Q8IYB3 904 aaKnown RBP11.83□□□□□ -0.51
USP6NL-202ENST00000379237 GSDMBQ8TAX9 411 aa11.83□□□□□ -0.51
USP6NL-202ENST00000379237 LPIN2Q92539 896 aa11.83□□□□□ -0.51
USP6NL-202ENST00000379237 METTL22Q9BUU2 404 aaPredicted RBP11.83□□□□□ -0.51
USP6NL-202ENST00000379237 RXFP1Q9HBX9 757 aa11.83□□□□□ -0.51
USP6NL-202ENST00000379237 SENP2Q9HC62 589 aa11.83□□□□□ -0.51
USP6NL-202ENST00000379237 ARHGAP20Q9P2F6 1191 aa11.83□□□□□ -0.51
USP6NL-202ENST00000379237 ANGPTL2Q9UKU9 493 aa11.83□□□□□ -0.51
USP6NL-202ENST00000379237 THAP12O43422 761 aa11.83□□□□□ -0.52
USP6NL-202ENST00000379237 H2AFZP0C0S5 128 aa11.83□□□□□ -0.52
USP6NL-202ENST00000379237 VPS41P49754 854 aa11.83□□□□□ -0.52
USP6NL-202ENST00000379237 SEL1L2Q5TEA6 688 aa11.83□□□□□ -0.52
USP6NL-202ENST00000379237 H2AFVQ71UI9 128 aa11.83□□□□□ -0.52
USP6NL-202ENST00000379237 PLEKHG4BQ96PX9 1271 aa11.83□□□□□ -0.52
USP6NL-202ENST00000379237 SIKE1Q9BRV8 207 aa11.83□□□□□ -0.52
USP6NL-202ENST00000379237 DCLRE1BQ9H816 532 aa11.83□□□□□ -0.52
USP6NL-202ENST00000379237 IQSEC3Q9UPP2 1182 aaPredicted RBP11.83□□□□□ -0.52
USP6NL-202ENST00000379237 LLGL1Q15334 1064 aa11.83□□□□□ -0.52
USP6NL-202ENST00000379237 ADSSL1Q8N142 457 aa11.83□□□□□ -0.52
USP6NL-202ENST00000379237 SMC1BQ8NDV3 1235 aa11.83□□□□□ -0.52
USP6NL-202ENST00000379237 IWS1Q96ST2 819 aa11.83□□□□□ -0.52
USP6NL-202ENST00000379237 ZBTB3Q9H5J0 574 aa11.83□□□□□ -0.52
USP6NL-202ENST00000379237 CYP39A1Q9NYL5 469 aa11.83□□□□□ -0.52
USP6NL-202ENST00000379237 ZFP69BQ9UJL9 534 aa11.83□□□□□ -0.52
USP6NL-202ENST00000379237 PLAGL2Q9UPG8 496 aa11.83□□□□□ -0.52
USP6NL-202ENST00000379237 LRRC10BA6NIK2 292 aa11.83□□□□□ -0.52
USP6NL-202ENST00000379237 PPP2R5EQ16537 467 aa11.83□□□□□ -0.52
USP6NL-202ENST00000379237 MBD4O95243 580 aa11.82□□□□□ -0.52
USP6NL-202ENST00000379237 MARK3P27448 753 aa11.82□□□□□ -0.52
USP6NL-202ENST00000379237 IFIT5Q13325 482 aaKnown RBP11.82□□□□□ -0.52
USP6NL-202ENST00000379237 LBRQ14739 615 aaKnown RBP11.82□□□□□ -0.52
USP6NL-202ENST00000379237 ANKLE2Q86XL3 938 aa11.82□□□□□ -0.52
USP6NL-202ENST00000379237 TBC1D10CQ8IV04 446 aa11.82□□□□□ -0.52
USP6NL-202ENST00000379237 CRACR2BQ8N4Y2 399 aaPredicted RBP11.82□□□□□ -0.52
USP6NL-202ENST00000379237 TTLL11Q8NHH1 800 aa11.82□□□□□ -0.52
USP6NL-202ENST00000379237 ZSWIM5Q9P217 1185 aa11.82□□□□□ -0.52
USP6NL-202ENST00000379237 SLC12A4Q9UP95 1085 aa11.82□□□□□ -0.52
USP6NL-202ENST00000379237 GLI2P10070 1586 aa11.82□□□□□ -0.52
USP6NL-202ENST00000379237 AFF2P51816 1311 aa11.82□□□□□ -0.52
USP6NL-202ENST00000379237 C5orf60A6NFR6 353 aa11.82□□□□□ -0.52
USP6NL-202ENST00000379237 DKC1O60832 514 aaKnown RBP eCLIP11.82□□□□□ -0.52
USP6NL-202ENST00000379237 CETN2P41208 172 aa11.82□□□□□ -0.52
USP6NL-202ENST00000379237 USP46P62068 366 aa11.82□□□□□ -0.52
USP6NL-202ENST00000379237 KPNB1Q14974 876 aaKnown RBP11.82□□□□□ -0.52
USP6NL-202ENST00000379237 ZCWPW2Q504Y3 356 aa11.82□□□□□ -0.52
USP6NL-202ENST00000379237 LRRC24Q50LG9 513 aa11.82□□□□□ -0.52
USP6NL-202ENST00000379237 SV2BQ7L1I2 683 aa11.82□□□□□ -0.52
USP6NL-202ENST00000379237 APTXQ7Z2E3 356 aaKnown RBP11.82□□□□□ -0.52
USP6NL-202ENST00000379237 RBM12BQ8IXT5 1001 aaKnown RBP11.82□□□□□ -0.52
USP6NL-202ENST00000379237 EPS8L3Q8TE67 593 aaKnown RBP11.82□□□□□ -0.52
USP6NL-202ENST00000379237 ZFAND2BQ8WV99 257 aa11.82□□□□□ -0.52
USP6NL-202ENST00000379237 SCG3Q8WXD2 468 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms