RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 EDEM3Q9BZQ6 932 aa15.2■□□□□ 0.02
TRIM13-202ENST00000378182 NGRNQ9NPE2 291 aaKnown RBP15.2■□□□□ 0.02
TRIM13-202ENST00000378182 ARAP3Q8WWN8 1544 aa15.2■□□□□ 0.02
TRIM13-202ENST00000378182 SLC17A8Q8NDX2 589 aa15.19■□□□□ 0.02
TRIM13-202ENST00000378182 PDE8BO95263 885 aa15.19■□□□□ 0.02
TRIM13-202ENST00000378182 SYNE4Q8N205 404 aa15.19■□□□□ 0.02
TRIM13-202ENST00000378182 ASIC4Q96FT7 647 aa15.19■□□□□ 0.02
TRIM13-202ENST00000378182 HPS4Q9NQG7 708 aa15.19■□□□□ 0.02
TRIM13-202ENST00000378182 NDFIP2Q9NV92 336 aa15.19■□□□□ 0.02
TRIM13-202ENST00000378182 ECE2O60344 883 aa15.19■□□□□ 0.02
TRIM13-202ENST00000378182 LONP1P36776 959 aaKnown RBP15.19■□□□□ 0.02
TRIM13-202ENST00000378182 GALNT17Q6IS24 598 aa15.19■□□□□ 0.02
TRIM13-202ENST00000378182 FAM180AQ6UWF9 173 aa15.19■□□□□ 0.02
TRIM13-202ENST00000378182 OGFRQ9NZT2 677 aa15.19■□□□□ 0.02
TRIM13-202ENST00000378182 ZMYND10O75800 440 aa15.19■□□□□ 0.02
TRIM13-202ENST00000378182 BBOX1O75936 387 aa15.19■□□□□ 0.02
TRIM13-202ENST00000378182 PYGLP06737 847 aa15.19■□□□□ 0.02
TRIM13-202ENST00000378182 H2AFZP0C0S5 128 aa15.19■□□□□ 0.02
TRIM13-202ENST00000378182 H2AFVQ71UI9 128 aa15.19■□□□□ 0.02
TRIM13-202ENST00000378182 RNF135Q8IUD6 432 aa15.19■□□□□ 0.02
TRIM13-202ENST00000378182 SH3RF3Q8TEJ3 882 aaPredicted RBP15.19■□□□□ 0.02
TRIM13-202ENST00000378182 FANCLQ9NW38 375 aa15.19■□□□□ 0.02
TRIM13-202ENST00000378182 FRMD3A2A2Y4 597 aa15.19■□□□□ 0.02
TRIM13-202ENST00000378182 PRAMEF22A3QJZ6 481 aa15.19■□□□□ 0.02
TRIM13-202ENST00000378182 CLTAP09496 248 aa15.19■□□□□ 0.02
TRIM13-202ENST00000378182 IFNLR1Q8IU57 520 aaPredicted RBP15.19■□□□□ 0.02
TRIM13-202ENST00000378182 MASTLQ96GX5 879 aa15.19■□□□□ 0.02
TRIM13-202ENST00000378182 WDR11Q9BZH6 1224 aa15.19■□□□□ 0.02
TRIM13-202ENST00000378182 FAF2Q96CS3 445 aa15.19■□□□□ 0.02
TRIM13-202ENST00000378182 GTPBP6O43824 516 aaPredicted RBP15.18■□□□□ 0.02
TRIM13-202ENST00000378182 LBRQ14739 615 aaKnown RBP15.18■□□□□ 0.02
TRIM13-202ENST00000378182 SNRNP48Q6IEG0 339 aaKnown RBP15.18■□□□□ 0.02
TRIM13-202ENST00000378182 HEY1Q9Y5J3 304 aa15.18■□□□□ 0.02
TRIM13-202ENST00000378182 BLMP54132 1417 aaPredicted RBP15.18■□□□□ 0.02
TRIM13-202ENST00000378182 ABCC10Q5T3U5 1492 aa15.18■□□□□ 0.02
TRIM13-202ENST00000378182 GAP43P17677 238 aa15.18■□□□□ 0.02
TRIM13-202ENST00000378182 CRKP46108 304 aa15.18■□□□□ 0.02
TRIM13-202ENST00000378182 ZNF568Q3ZCX4 644 aa15.18■□□□□ 0.02
TRIM13-202ENST00000378182 LCORLQ8N3X6 602 aa15.18■□□□□ 0.02
TRIM13-202ENST00000378182 BABAM1Q9NWV8 329 aa15.18■□□□□ 0.02
TRIM13-202ENST00000378182 SLCO1A2P46721 670 aa15.18■□□□□ 0.02
TRIM13-202ENST00000378182 C2orf54Q08AI8 447 aa15.18■□□□□ 0.02
TRIM13-202ENST00000378182 SCRN1Q12765 414 aa15.18■□□□□ 0.02
TRIM13-202ENST00000378182 MTMR1Q13613 665 aa15.18■□□□□ 0.02
TRIM13-202ENST00000378182 PARVGQ9HBI0 331 aa15.18■□□□□ 0.02
TRIM13-202ENST00000378182 PAMP19021 973 aa15.18■□□□□ 0.02
TRIM13-202ENST00000378182 PIP4K2CQ8TBX8 421 aa15.18■□□□□ 0.02
TRIM13-202ENST00000378182 Q9H521 79 aa15.18■□□□□ 0.02
TRIM13-202ENST00000378182 HOMER3Q9NSC5 361 aa15.18■□□□□ 0.02
TRIM13-202ENST00000378182 TLR7Q9NYK1 1049 aaKnown RBP15.18■□□□□ 0.02
TRIM13-202ENST00000378182 EIF3CLB5ME19 914 aaKnown RBP15.18■□□□□ 0.02
TRIM13-202ENST00000378182 ABHD8Q96I13 439 aa15.18■□□□□ 0.02
TRIM13-202ENST00000378182 EIF3CQ99613 913 aaKnown RBP15.18■□□□□ 0.02
TRIM13-202ENST00000378182 TMEM206Q9H813 350 aa15.18■□□□□ 0.02
TRIM13-202ENST00000378182 ATP10AO60312 1499 aa15.18■□□□□ 0.02
TRIM13-202ENST00000378182 LRRD1A4D1F6 860 aa15.17■□□□□ 0.02
TRIM13-202ENST00000378182 GOLGA8MH3BSY2 632 aa15.17■□□□□ 0.02
TRIM13-202ENST00000378182 ZBED1O96006 694 aa15.17■□□□□ 0.02
TRIM13-202ENST00000378182 GRIK1P39086 918 aa15.17■□□□□ 0.02
TRIM13-202ENST00000378182 MAML1Q92585 1016 aa15.17■□□□□ 0.02
TRIM13-202ENST00000378182 TUBGCP2Q9BSJ2 902 aa15.17■□□□□ 0.02
TRIM13-202ENST00000378182 DFFAO00273 331 aa15.17■□□□□ 0.02
TRIM13-202ENST00000378182 PDCD2Q16342 344 aaPredicted RBP15.17■□□□□ 0.02
TRIM13-202ENST00000378182 POLD4Q9HCU8 107 aa15.17■□□□□ 0.02
TRIM13-202ENST00000378182 KIAA1468Q9P260 1216 aa15.17■□□□□ 0.02
TRIM13-202ENST00000378182 KLHL8Q9P2G9 620 aaPredicted RBP15.17■□□□□ 0.02
TRIM13-202ENST00000378182 KIF21AQ7Z4S6 1674 aa15.17■□□□□ 0.02
TRIM13-202ENST00000378182 ZNF157P51786 506 aaPredicted RBP15.17■□□□□ 0.02
TRIM13-202ENST00000378182 PROSER3Q2NL68 480 aa15.17■□□□□ 0.02
TRIM13-202ENST00000378182 SLC10A5Q5PT55 438 aa15.17■□□□□ 0.02
TRIM13-202ENST00000378182 TAS2R42Q7RTR8 314 aa15.17■□□□□ 0.02
TRIM13-202ENST00000378182 ZNF274Q96GC6 653 aaPredicted RBP15.17■□□□□ 0.02
TRIM13-202ENST00000378182 SPATA33Q96N06 139 aa15.17■□□□□ 0.02
TRIM13-202ENST00000378182 A0A087WWV3 80 aa15.17■□□□□ 0.02
TRIM13-202ENST00000378182 ADORA2BP29275 332 aa15.17■□□□□ 0.02
TRIM13-202ENST00000378182 UGGT2Q9NYU1 1516 aa15.17■□□□□ 0.02
TRIM13-202ENST00000378182 KBTBD13C9JR72 458 aa15.17■□□□□ 0.02
TRIM13-202ENST00000378182 HUS1O60921 280 aa15.17■□□□□ 0.02
TRIM13-202ENST00000378182 KITP10721 976 aa15.17■□□□□ 0.02
TRIM13-202ENST00000378182 AP1B1Q10567 949 aa15.17■□□□□ 0.02
TRIM13-202ENST00000378182 STXBP2Q15833 593 aa15.17■□□□□ 0.02
TRIM13-202ENST00000378182 CYFIP1Q7L576 1253 aa15.17■□□□□ 0.02
TRIM13-202ENST00000378182 ERICH1Q86X53 443 aa15.17■□□□□ 0.02
TRIM13-202ENST00000378182 USP28Q96RU2 1077 aa15.17■□□□□ 0.02
TRIM13-202ENST00000378182 SPON2Q9BUD6 331 aa15.17■□□□□ 0.02
TRIM13-202ENST00000378182 SP110Q9HB58 689 aa15.17■□□□□ 0.02
TRIM13-202ENST00000378182 MAFGO15525 162 aa15.17■□□□□ 0.02
TRIM13-202ENST00000378182 SRGAP2O75044 1071 aa15.17■□□□□ 0.02
TRIM13-202ENST00000378182 RMDN3Q96TC7 470 aa15.17■□□□□ 0.02
TRIM13-202ENST00000378182 RASSF4Q9H2L5 321 aa15.17■□□□□ 0.02
TRIM13-202ENST00000378182 MAST1Q9Y2H9 1570 aa15.17■□□□□ 0.02
TRIM13-202ENST00000378182 ATP10DQ9P241 1426 aa15.16■□□□□ 0.02
TRIM13-202ENST00000378182 AOX1Q06278 1338 aa15.16■□□□□ 0.02
TRIM13-202ENST00000378182 CHEK2O96017 543 aa15.16■□□□□ 0.02
TRIM13-202ENST00000378182 COPB2P35606 906 aa15.16■□□□□ 0.02
TRIM13-202ENST00000378182 CDK8P49336 464 aa15.16■□□□□ 0.02
TRIM13-202ENST00000378182 LMNB2Q03252 620 aa15.16■□□□□ 0.02
TRIM13-202ENST00000378182 TCP11X2Q5H9J9 407 aa15.16■□□□□ 0.02
TRIM13-202ENST00000378182 POTEDQ86YR6 584 aa15.16■□□□□ 0.02
TRIM13-202ENST00000378182 SCYL3Q8IZE3 742 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms