RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 CUEDC2Q9H467 287 aa9.27□□□□□ -0.93
CRNKL1-202ENST00000377340 GINM1Q9NU53 330 aa9.27□□□□□ -0.93
CRNKL1-202ENST00000377340 HESX1Q9UBX0 185 aa9.27□□□□□ -0.93
CRNKL1-202ENST00000377340 DNAI1Q9UI46 699 aa9.27□□□□□ -0.93
CRNKL1-202ENST00000377340 HPS5Q9UPZ3 1129 aa9.27□□□□□ -0.93
CRNKL1-202ENST00000377340 PEAK1Q9H792 1746 aa9.27□□□□□ -0.93
CRNKL1-202ENST00000377340 LRRN2O75325 713 aa9.27□□□□□ -0.93
CRNKL1-202ENST00000377340 EIF3JO75822 258 aaKnown RBP9.27□□□□□ -0.93
CRNKL1-202ENST00000377340 YBX3P16989 372 aaKnown RBP eCLIP9.27□□□□□ -0.93
CRNKL1-202ENST00000377340 ATF7P17544 494 aaPredicted RBP9.27□□□□□ -0.93
CRNKL1-202ENST00000377340 ADORA2AP29274 412 aa9.27□□□□□ -0.93
CRNKL1-202ENST00000377340 DSG3P32926 999 aa9.27□□□□□ -0.93
CRNKL1-202ENST00000377340 FKBP1AP62942 108 aaKnown RBP9.27□□□□□ -0.93
CRNKL1-202ENST00000377340 TNNC1P63316 161 aa9.27□□□□□ -0.93
CRNKL1-202ENST00000377340 FKBP3Q00688 224 aaKnown RBP9.27□□□□□ -0.93
CRNKL1-202ENST00000377340 CDR2LQ86X02 465 aaPredicted RBP9.27□□□□□ -0.93
CRNKL1-202ENST00000377340 TCP11Q8WWU5 503 aa9.27□□□□□ -0.93
CRNKL1-202ENST00000377340 KLRG1Q96E93 195 aa9.27□□□□□ -0.93
CRNKL1-202ENST00000377340 PAGE5Q96GU1 130 aa9.27□□□□□ -0.93
CRNKL1-202ENST00000377340 MTRQ99707 1265 aa9.27□□□□□ -0.93
CRNKL1-202ENST00000377340 RPF1Q9H9Y2 349 aaKnown RBP9.27□□□□□ -0.93
CRNKL1-202ENST00000377340 RIC1Q4ADV7 1423 aa9.27□□□□□ -0.93
CRNKL1-202ENST00000377340 CAPN9O14815 690 aa9.27□□□□□ -0.93
CRNKL1-202ENST00000377340 FDPSP14324 419 aaKnown RBP9.27□□□□□ -0.93
CRNKL1-202ENST00000377340 BRD2P25440 801 aaKnown RBP9.27□□□□□ -0.93
CRNKL1-202ENST00000377340 PHKA2P46019 1235 aa9.27□□□□□ -0.93
CRNKL1-202ENST00000377340 POLR2FP61218 127 aaKnown RBP9.27□□□□□ -0.93
CRNKL1-202ENST00000377340 IFI16Q16666 785 aaKnown RBP9.27□□□□□ -0.93
CRNKL1-202ENST00000377340 KMT5BQ4FZB7 885 aa9.27□□□□□ -0.93
CRNKL1-202ENST00000377340 ZNF394Q53GI3 561 aa9.27□□□□□ -0.93
CRNKL1-202ENST00000377340 KCNV1Q6PIU1 500 aa9.27□□□□□ -0.93
CRNKL1-202ENST00000377340 USP49Q70CQ1 688 aa9.27□□□□□ -0.93
CRNKL1-202ENST00000377340 ZBTB9Q96C00 473 aa9.27□□□□□ -0.93
CRNKL1-202ENST00000377340 CAPNS2Q96L46 248 aa9.27□□□□□ -0.93
CRNKL1-202ENST00000377340 PLVAPQ9BX97 442 aa9.27□□□□□ -0.93
CRNKL1-202ENST00000377340 XPO4Q9C0E2 1151 aaKnown RBP9.27□□□□□ -0.93
CRNKL1-202ENST00000377340 CTTNBP2NLQ9P2B4 639 aa9.27□□□□□ -0.93
CRNKL1-202ENST00000377340 CCDC175P0C221 793 aa9.26□□□□□ -0.93
CRNKL1-202ENST00000377340 YWHABP31946 246 aaKnown RBP9.26□□□□□ -0.93
CRNKL1-202ENST00000377340 STAT1P42224 750 aa9.26□□□□□ -0.93
CRNKL1-202ENST00000377340 ADKP55263 362 aaKnown RBP9.26□□□□□ -0.93
CRNKL1-202ENST00000377340 SEC23AQ15436 765 aa9.26□□□□□ -0.93
CRNKL1-202ENST00000377340 IQCEQ6IPM2 695 aa9.26□□□□□ -0.93
CRNKL1-202ENST00000377340 TYW1BQ6NUM6 668 aa9.26□□□□□ -0.93
CRNKL1-202ENST00000377340 FAM149B1Q96BN6 582 aa9.26□□□□□ -0.93
CRNKL1-202ENST00000377340 FERMT1Q9BQL6 677 aa9.26□□□□□ -0.93
CRNKL1-202ENST00000377340 POLR3FQ9H1D9 316 aaPredicted RBP9.26□□□□□ -0.93
CRNKL1-202ENST00000377340 TMEM60Q9H2L4 133 aa9.26□□□□□ -0.93
CRNKL1-202ENST00000377340 SMARCAD1Q9H4L7 1026 aa9.26□□□□□ -0.93
CRNKL1-202ENST00000377340 PDS5AQ29RF7 1337 aaKnown RBP9.26□□□□□ -0.93
CRNKL1-202ENST00000377340 DAPK3O43293 454 aa9.26□□□□□ -0.93
CRNKL1-202ENST00000377340 KRT86O43790 486 aa9.26□□□□□ -0.93
CRNKL1-202ENST00000377340 CYP2C9P11712 490 aa9.26□□□□□ -0.93
CRNKL1-202ENST00000377340 KRT83P78385 493 aa9.26□□□□□ -0.93
CRNKL1-202ENST00000377340 SEPT7Q16181 437 aaKnown RBP9.26□□□□□ -0.93
CRNKL1-202ENST00000377340 PRAMEF19Q5SWL8 479 aa9.26□□□□□ -0.93
CRNKL1-202ENST00000377340 CCDC122Q5T0U0 273 aa9.26□□□□□ -0.93
CRNKL1-202ENST00000377340 DSTYKQ6XUX3 929 aa9.26□□□□□ -0.93
CRNKL1-202ENST00000377340 GBP6Q6ZN66 633 aa9.26□□□□□ -0.93
CRNKL1-202ENST00000377340 HPS3Q969F9 1004 aa9.26□□□□□ -0.93
CRNKL1-202ENST00000377340 GMCL1Q96IK5 515 aa9.26□□□□□ -0.93
CRNKL1-202ENST00000377340 BAG1Q99933 345 aaPredicted RBP9.26□□□□□ -0.93
CRNKL1-202ENST00000377340 MXRA8Q9BRK3 442 aa9.26□□□□□ -0.93
CRNKL1-202ENST00000377340 PHF20Q9BVI0 1012 aa9.26□□□□□ -0.93
CRNKL1-202ENST00000377340 SLITRK6Q9H5Y7 841 aa9.26□□□□□ -0.93
CRNKL1-202ENST00000377340 PIN4Q9Y237 131 aaKnown RBP9.26□□□□□ -0.93
CRNKL1-202ENST00000377340 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.26□□□□□ -0.93
CRNKL1-202ENST00000377340 TTLL3Q9Y4R7 772 aa9.26□□□□□ -0.93
CRNKL1-202ENST00000377340 SALL3Q9BXA9 1300 aa9.26□□□□□ -0.93
CRNKL1-202ENST00000377340 TACC1O75410 805 aa9.26□□□□□ -0.93
CRNKL1-202ENST00000377340 ERVK-9P63128 1117 aa9.26□□□□□ -0.93
CRNKL1-202ENST00000377340 ERVK-24P63145 666 aa9.26□□□□□ -0.93
CRNKL1-202ENST00000377340 SP3Q02447 781 aa9.26□□□□□ -0.93
CRNKL1-202ENST00000377340 EPHA7Q15375 998 aa9.26□□□□□ -0.93
CRNKL1-202ENST00000377340 KIAA0753Q2KHM9 967 aa9.26□□□□□ -0.93
CRNKL1-202ENST00000377340 RSRC2Q7L4I2 434 aaKnown RBP9.26□□□□□ -0.93
CRNKL1-202ENST00000377340 ANKRD36BP1Q96IX9 119 aa9.26□□□□□ -0.93
CRNKL1-202ENST00000377340 CNOT6LQ96LI5 555 aaKnown RBP9.26□□□□□ -0.93
CRNKL1-202ENST00000377340 PSMB7Q99436 277 aa9.26□□□□□ -0.93
CRNKL1-202ENST00000377340 ZMYND12Q9H0C1 365 aa9.26□□□□□ -0.93
CRNKL1-202ENST00000377340 ZNF142P52746 1687 aaPredicted RBP9.26□□□□□ -0.93
CRNKL1-202ENST00000377340 A0A1W2PRG0 241 aa9.25□□□□□ -0.93
CRNKL1-202ENST00000377340 CTDNEP1O95476 244 aa9.25□□□□□ -0.93
CRNKL1-202ENST00000377340 CYP2W1Q8TAV3 490 aa9.25□□□□□ -0.93
CRNKL1-202ENST00000377340 AFG1LQ8WV93 481 aa9.25□□□□□ -0.93
CRNKL1-202ENST00000377340 P2RX5Q93086 422 aa9.25□□□□□ -0.93
CRNKL1-202ENST00000377340 CAPZA3Q96KX2 299 aa9.25□□□□□ -0.93
CRNKL1-202ENST00000377340 PURBQ96QR8 312 aaKnown RBP9.25□□□□□ -0.93
CRNKL1-202ENST00000377340 FAM213AQ9BRX8 229 aa9.25□□□□□ -0.93
CRNKL1-202ENST00000377340 TUBGCP2Q9BSJ2 902 aa9.25□□□□□ -0.93
CRNKL1-202ENST00000377340 MRIQ9BWK5 157 aa9.25□□□□□ -0.93
CRNKL1-202ENST00000377340 MOV10L1Q9BXT6 1211 aaKnown RBP9.25□□□□□ -0.93
CRNKL1-202ENST00000377340 GCOM2Q9BZD3 368 aaPredicted RBP9.25□□□□□ -0.93
CRNKL1-202ENST00000377340 TMEM206Q9H813 350 aa9.25□□□□□ -0.93
CRNKL1-202ENST00000377340 METTL14Q9HCE5 456 aaKnown RBP9.25□□□□□ -0.93
CRNKL1-202ENST00000377340 SUCLA2Q9P2R7 463 aaPredicted RBP9.25□□□□□ -0.93
CRNKL1-202ENST00000377340 MYBP10242 640 aa9.25□□□□□ -0.93
CRNKL1-202ENST00000377340 PSMC2P35998 433 aaKnown RBP9.25□□□□□ -0.93
CRNKL1-202ENST00000377340 TCF7P36402 384 aaPredicted RBP9.25□□□□□ -0.93
CRNKL1-202ENST00000377340 EXOC3L4Q17RC7 722 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms