RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 TEKT1Q969V4 418 aa27.8■■■□□ 2.04
C9orf40-201ENST00000376854 PACSIN1Q9BY11 444 aa27.8■■■□□ 2.04
C9orf40-201ENST00000376854 PLEKHA4Q9H4M7 779 aa27.8■■■□□ 2.04
C9orf40-201ENST00000376854 DBNDD1Q9H9R9 158 aa27.8■■■□□ 2.04
C9orf40-201ENST00000376854 TMEM51Q9NW97 253 aa27.8■■■□□ 2.04
C9orf40-201ENST00000376854 HDAC9Q9UKV0 1011 aa27.8■■■□□ 2.04
C9orf40-201ENST00000376854 ARFGEF1Q9Y6D6 1849 aa27.8■■■□□ 2.04
C9orf40-201ENST00000376854 OPA1O60313 960 aa27.79■■■□□ 2.04
C9orf40-201ENST00000376854 ALS2CLQ60I27 953 aa27.79■■■□□ 2.04
C9orf40-201ENST00000376854 CATSPER3Q86XQ3 398 aa27.79■■■□□ 2.04
C9orf40-201ENST00000376854 IFT20Q8IY31 132 aa27.79■■■□□ 2.04
C9orf40-201ENST00000376854 EHD4Q9H223 541 aa27.79■■■□□ 2.04
C9orf40-201ENST00000376854 RASSF4Q9H2L5 321 aa27.79■■■□□ 2.04
C9orf40-201ENST00000376854 MEIS2O14770 477 aa27.79■■■□□ 2.04
C9orf40-201ENST00000376854 EEF2P13639 858 aaKnown RBP27.79■■■□□ 2.04
C9orf40-201ENST00000376854 PRR16Q569H4 304 aa27.79■■■□□ 2.04
C9orf40-201ENST00000376854 MOXD1Q6UVY6 613 aa27.79■■■□□ 2.04
C9orf40-201ENST00000376854 HHIPL2Q6UWX4 724 aa27.79■■■□□ 2.04
C9orf40-201ENST00000376854 DNAJC18Q9H819 358 aa27.79■■■□□ 2.04
C9orf40-201ENST00000376854 G3V3G9 751 aa27.78■■■□□ 2.04
C9orf40-201ENST00000376854 GLI1P08151 1106 aa27.78■■■□□ 2.04
C9orf40-201ENST00000376854 ARHGAP4P98171 946 aa27.78■■■□□ 2.04
C9orf40-201ENST00000376854 SPIRE1Q08AE8 756 aa27.78■■■□□ 2.04
C9orf40-201ENST00000376854 PPFIA1Q13136 1202 aa27.78■■■□□ 2.04
C9orf40-201ENST00000376854 AP3B2Q13367 1082 aa27.78■■■□□ 2.04
C9orf40-201ENST00000376854 DCAF8Q5TAQ9 597 aa27.78■■■□□ 2.04
C9orf40-201ENST00000376854 ETNPPLQ8TBG4 499 aa27.78■■■□□ 2.04
C9orf40-201ENST00000376854 DCAF4Q8WV16 495 aa27.78■■■□□ 2.04
C9orf40-201ENST00000376854 PACSIN2Q9UNF0 486 aaPredicted RBP27.78■■■□□ 2.04
C9orf40-201ENST00000376854 HSF2BPO75031 334 aa27.78■■■□□ 2.04
C9orf40-201ENST00000376854 ACTN1P12814 892 aa27.78■■■□□ 2.04
C9orf40-201ENST00000376854 PSMC6P62333 389 aa27.78■■■□□ 2.04
C9orf40-201ENST00000376854 GIT2Q14161 759 aa27.78■■■□□ 2.04
C9orf40-201ENST00000376854 SLFN13Q68D06 897 aa27.78■■■□□ 2.04
C9orf40-201ENST00000376854 RUFY1Q96T51 708 aa27.78■■■□□ 2.04
C9orf40-201ENST00000376854 GRID2IPA4D2P6 1211 aa27.77■■■□□ 2.04
C9orf40-201ENST00000376854 MEIS1O00470 390 aa27.77■■■□□ 2.04
C9orf40-201ENST00000376854 CRKP46108 304 aa27.77■■■□□ 2.04
C9orf40-201ENST00000376854 TCP10Q12799 353 aa27.77■■■□□ 2.04
C9orf40-201ENST00000376854 PABPC4Q13310 644 aaKnown RBP eCLIP27.77■■■□□ 2.04
C9orf40-201ENST00000376854 NNTQ13423 1086 aa27.77■■■□□ 2.04
C9orf40-201ENST00000376854 ERMNQ8TAM6 284 aa27.77■■■□□ 2.04
C9orf40-201ENST00000376854 GDF3Q9NR23 364 aa27.77■■■□□ 2.04
C9orf40-201ENST00000376854 ARMCX3Q9UH62 379 aaPredicted RBP27.77■■■□□ 2.04
C9orf40-201ENST00000376854 SLC20A2Q08357 652 aa27.76■■■□□ 2.04
C9orf40-201ENST00000376854 FRMD5Q7Z6J6 570 aa27.76■■■□□ 2.04
C9orf40-201ENST00000376854 DNM3Q9UQ16 869 aa27.76■■■□□ 2.04
C9orf40-201ENST00000376854 TRAF3IP3Q9Y228 551 aa27.76■■■□□ 2.04
C9orf40-201ENST00000376854 GREB1LQ9C091 1923 aaPredicted RBP27.76■■■□□ 2.04
C9orf40-201ENST00000376854 MYH4Q9Y623 1939 aa27.76■■■□□ 2.04
C9orf40-201ENST00000376854 HEXIM1O94992 359 aaKnown RBP27.76■■■□□ 2.03
C9orf40-201ENST00000376854 KNOP1Q1ED39 458 aaKnown RBP27.76■■■□□ 2.03
C9orf40-201ENST00000376854 CRYGNQ8WXF5 182 aa27.76■■■□□ 2.03
C9orf40-201ENST00000376854 MKL1Q969V6 931 aa27.76■■■□□ 2.03
C9orf40-201ENST00000376854 EPB41L5Q9HCM4 733 aa27.76■■■□□ 2.03
C9orf40-201ENST00000376854 EPB41P11171 864 aaKnown RBP27.75■■■□□ 2.03
C9orf40-201ENST00000376854 SLC9A1P19634 815 aa27.75■■■□□ 2.03
C9orf40-201ENST00000376854 CARSP49589 748 aaKnown RBP27.75■■■□□ 2.03
C9orf40-201ENST00000376854 GUCY2DQ02846 1103 aa27.75■■■□□ 2.03
C9orf40-201ENST00000376854 PTK2Q05397 1052 aa27.75■■■□□ 2.03
C9orf40-201ENST00000376854 SFR1Q86XK3 245 aa27.75■■■□□ 2.03
C9orf40-201ENST00000376854 KIAA0825Q8IV33 1275 aa27.75■■■□□ 2.03
C9orf40-201ENST00000376854 NLGN1Q8N2Q7 840 aa27.75■■■□□ 2.03
C9orf40-201ENST00000376854 P2RX7Q99572 595 aaKnown RBP27.75■■■□□ 2.03
C9orf40-201ENST00000376854 REEP2Q9BRK0 252 aa27.75■■■□□ 2.03
C9orf40-201ENST00000376854 COL11A2P13942 1736 aaPredicted RBP27.75■■■□□ 2.03
C9orf40-201ENST00000376854 MMP10P09238 476 aa27.75■■■□□ 2.03
C9orf40-201ENST00000376854 SYT2Q8N9I0 419 aaPredicted RBP27.75■■■□□ 2.03
C9orf40-201ENST00000376854 INPP4AQ96PE3 977 aaPredicted RBP27.75■■■□□ 2.03
C9orf40-201ENST00000376854 SPAG5Q96R06 1193 aa27.75■■■□□ 2.03
C9orf40-201ENST00000376854 PLCB1Q9NQ66 1216 aa27.75■■■□□ 2.03
C9orf40-201ENST00000376854 NYAP2Q9P242 653 aa27.75■■■□□ 2.03
C9orf40-201ENST00000376854 NFU1Q9UMS0 254 aa27.75■■■□□ 2.03
C9orf40-201ENST00000376854 NRXN2Q9P2S2 1712 aa27.74■■■□□ 2.03
C9orf40-201ENST00000376854 AFPP02771 609 aaKnown RBP27.74■■■□□ 2.03
C9orf40-201ENST00000376854 SPATA31C1P0DKV0 1188 aa27.74■■■□□ 2.03
C9orf40-201ENST00000376854 RPA1P27694 616 aa27.74■■■□□ 2.03
C9orf40-201ENST00000376854 IRAK1P51617 712 aa27.74■■■□□ 2.03
C9orf40-201ENST00000376854 IRF2BP2Q7Z5L9 587 aa27.74■■■□□ 2.03
C9orf40-201ENST00000376854 IFT81Q8WYA0 676 aa27.74■■■□□ 2.03
C9orf40-201ENST00000376854 KRT12Q99456 494 aa27.74■■■□□ 2.03
C9orf40-201ENST00000376854 ESYT3A0FGR9 886 aa27.74■■■□□ 2.03
C9orf40-201ENST00000376854 ZSCAN5CA6NGD5 496 aaPredicted RBP27.74■■■□□ 2.03
C9orf40-201ENST00000376854 TBX3O15119 743 aa27.74■■■□□ 2.03
C9orf40-201ENST00000376854 UCHL3P15374 230 aa27.74■■■□□ 2.03
C9orf40-201ENST00000376854 ALDH1B1P30837 517 aa27.74■■■□□ 2.03
C9orf40-201ENST00000376854 PAK2Q13177 524 aa27.74■■■□□ 2.03
C9orf40-201ENST00000376854 CERKLQ49MI3 558 aaPredicted RBP27.74■■■□□ 2.03
C9orf40-201ENST00000376854 Q4G0T1 1027 aa27.74■■■□□ 2.03
C9orf40-201ENST00000376854 MSL1Q68DK7 614 aa27.74■■■□□ 2.03
C9orf40-201ENST00000376854 DPY19L2P1Q6NXN4 242 aa27.74■■■□□ 2.03
C9orf40-201ENST00000376854 GBP6Q6ZN66 633 aa27.74■■■□□ 2.03
C9orf40-201ENST00000376854 CAPS2Q9BXY5 557 aa27.74■■■□□ 2.03
C9orf40-201ENST00000376854 BTNL10A8MVZ5 291 aa27.73■■■□□ 2.03
C9orf40-201ENST00000376854 HOXD13P35453 343 aa27.73■■■□□ 2.03
C9orf40-201ENST00000376854 RNASE9P60153 205 aaKnown RBP27.73■■■□□ 2.03
C9orf40-201ENST00000376854 SNAP25P60880 206 aa27.73■■■□□ 2.03
C9orf40-201ENST00000376854 C10orf76Q5T2E6 689 aa27.73■■■□□ 2.03
C9orf40-201ENST00000376854 EPM2AIP1Q7L775 607 aaPredicted RBP27.73■■■□□ 2.03
C9orf40-201ENST00000376854 ZNF571Q7Z3V5 609 aaPredicted RBP27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms