RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 CETN3O15182 167 aa14.51□□□□□ -0.09
ACTN1-202ENST00000376839 CPP00450 1065 aa14.51□□□□□ -0.09
ACTN1-202ENST00000376839 SHMT1P34896 483 aa14.51□□□□□ -0.09
ACTN1-202ENST00000376839 PROCA1Q8NCQ7 364 aaPredicted RBP14.51□□□□□ -0.09
ACTN1-202ENST00000376839 TBC1D22AQ8WUA7 517 aa14.51□□□□□ -0.09
ACTN1-202ENST00000376839 KCNMB3Q9NPA1 279 aa14.51□□□□□ -0.09
ACTN1-202ENST00000376839 FRMD3A2A2Y4 597 aa14.5□□□□□ -0.09
ACTN1-202ENST00000376839 ZEB2O60315 1214 aa14.5□□□□□ -0.09
ACTN1-202ENST00000376839 MYBP10242 640 aa14.5□□□□□ -0.09
ACTN1-202ENST00000376839 PSMC6P62333 389 aa14.5□□□□□ -0.09
ACTN1-202ENST00000376839 ERVK-9P63128 1117 aa14.5□□□□□ -0.09
ACTN1-202ENST00000376839 GUCY1A3Q02108 690 aa14.5□□□□□ -0.09
ACTN1-202ENST00000376839 FAM196AQ6ZSG2 479 aa14.5□□□□□ -0.09
ACTN1-202ENST00000376839 DHX36Q9H2U1 1008 aaKnown RBP14.5□□□□□ -0.09
ACTN1-202ENST00000376839 SERPINB13Q9UIV8 391 aa14.5□□□□□ -0.09
ACTN1-202ENST00000376839 TMEM59LQ9UK28 342 aa14.5□□□□□ -0.09
ACTN1-202ENST00000376839 MYH4Q9Y623 1939 aa14.5□□□□□ -0.09
ACTN1-202ENST00000376839 ATAD5Q96QE3 1844 aa14.5□□□□□ -0.09
ACTN1-202ENST00000376839 C6orf229H3BNL8 230 aa14.5□□□□□ -0.09
ACTN1-202ENST00000376839 MEIS1O00470 390 aa14.5□□□□□ -0.09
ACTN1-202ENST00000376839 MPHOSPH10O00566 681 aaKnown RBP14.5□□□□□ -0.09
ACTN1-202ENST00000376839 HOXD13P35453 343 aa14.5□□□□□ -0.09
ACTN1-202ENST00000376839 RPS6KA1Q15418 735 aa14.5□□□□□ -0.09
ACTN1-202ENST00000376839 EDRF1Q3B7T1 1238 aa14.5□□□□□ -0.09
ACTN1-202ENST00000376839 CRY2Q49AN0 593 aa14.5□□□□□ -0.09
ACTN1-202ENST00000376839 RBM46Q8TBY0 533 aaKnown RBP14.5□□□□□ -0.09
ACTN1-202ENST00000376839 BCAS3Q9H6U6 928 aa14.5□□□□□ -0.09
ACTN1-202ENST00000376839 AJAP1Q9UKB5 411 aaPredicted RBP14.5□□□□□ -0.09
ACTN1-202ENST00000376839 NDUFAB1O14561 156 aa14.49□□□□□ -0.09
ACTN1-202ENST00000376839 KIF4AO95239 1232 aa14.49□□□□□ -0.09
ACTN1-202ENST00000376839 UCHL3P15374 230 aa14.49□□□□□ -0.09
ACTN1-202ENST00000376839 KDM7AQ6ZMT4 941 aa14.49□□□□□ -0.09
ACTN1-202ENST00000376839 TAF4BQ92750 862 aa14.49□□□□□ -0.09
ACTN1-202ENST00000376839 KAT2BQ92831 832 aa14.49□□□□□ -0.09
ACTN1-202ENST00000376839 P2RX7Q99572 595 aaKnown RBP14.49□□□□□ -0.09
ACTN1-202ENST00000376839 MXD3Q9BW11 206 aa14.49□□□□□ -0.09
ACTN1-202ENST00000376839 RAD21O60216 631 aa14.49□□□□□ -0.09
ACTN1-202ENST00000376839 ECHS1P30084 290 aa14.49□□□□□ -0.09
ACTN1-202ENST00000376839 TNNC1P63316 161 aa14.49□□□□□ -0.09
ACTN1-202ENST00000376839 PABPC4Q13310 644 aaKnown RBP eCLIP14.49□□□□□ -0.09
ACTN1-202ENST00000376839 SHROOM1Q2M3G4 852 aaPredicted RBP14.49□□□□□ -0.09
ACTN1-202ENST00000376839 QRICH1Q2TAL8 776 aa14.49□□□□□ -0.09
ACTN1-202ENST00000376839 GPATCH4Q5T3I0 446 aaKnown RBP14.49□□□□□ -0.09
ACTN1-202ENST00000376839 SPAG5Q96R06 1193 aa14.49□□□□□ -0.09
ACTN1-202ENST00000376839 ANO3Q9BYT9 981 aa14.49□□□□□ -0.09
ACTN1-202ENST00000376839 FAM107BQ9H098 131 aa14.49□□□□□ -0.09
ACTN1-202ENST00000376839 RIMBP2O15034 1052 aa14.48□□□□□ -0.09
ACTN1-202ENST00000376839 NR1D1P20393 614 aa14.48□□□□□ -0.09
ACTN1-202ENST00000376839 PON1P27169 355 aa14.48□□□□□ -0.09
ACTN1-202ENST00000376839 LSP1P33241 339 aa14.48□□□□□ -0.09
ACTN1-202ENST00000376839 USP11P51784 963 aa14.48□□□□□ -0.09
ACTN1-202ENST00000376839 GIT2Q14161 759 aa14.48□□□□□ -0.09
ACTN1-202ENST00000376839 SFR1Q86XK3 245 aa14.48□□□□□ -0.09
ACTN1-202ENST00000376839 DDX42Q86XP3 938 aaKnown RBP eCLIP14.48□□□□□ -0.09
ACTN1-202ENST00000376839 CATSPER3Q86XQ3 398 aa14.48□□□□□ -0.09
ACTN1-202ENST00000376839 CD302Q8IX05 232 aa14.48□□□□□ -0.09
ACTN1-202ENST00000376839 CERS5Q8N5B7 392 aa14.48□□□□□ -0.09
ACTN1-202ENST00000376839 LRRC57Q8N9N7 239 aa14.48□□□□□ -0.09
ACTN1-202ENST00000376839 CERKQ8TCT0 537 aa14.48□□□□□ -0.09
ACTN1-202ENST00000376839 WHAMMQ8TF30 809 aa14.48□□□□□ -0.09
ACTN1-202ENST00000376839 AP1M1Q9BXS5 423 aa14.48□□□□□ -0.09
ACTN1-202ENST00000376839 ARMCX3Q9UH62 379 aaPredicted RBP14.48□□□□□ -0.09
ACTN1-202ENST00000376839 NAGPAQ9UK23 515 aa14.48□□□□□ -0.09
ACTN1-202ENST00000376839 PLAAQ9Y263 795 aa14.48□□□□□ -0.09
ACTN1-202ENST00000376839 BTNL10A8MVZ5 291 aa14.48□□□□□ -0.09
ACTN1-202ENST00000376839 CEP104O60308 925 aa14.48□□□□□ -0.09
ACTN1-202ENST00000376839 SPIRE1Q08AE8 756 aa14.48□□□□□ -0.09
ACTN1-202ENST00000376839 HLTFQ14527 1009 aaKnown RBP eCLIP14.48□□□□□ -0.09
ACTN1-202ENST00000376839 DCAF17Q5H9S7 520 aaPredicted RBP14.48□□□□□ -0.09
ACTN1-202ENST00000376839 PPP4R3CPQ6ZMV5 832 aa14.48□□□□□ -0.09
ACTN1-202ENST00000376839 REEP2Q9BRK0 252 aa14.48□□□□□ -0.09
ACTN1-202ENST00000376839 TAF1DQ9H5J8 278 aaPredicted RBP14.48□□□□□ -0.09
ACTN1-202ENST00000376839 PITPNM2Q9BZ72 1349 aa14.48□□□□□ -0.09
ACTN1-202ENST00000376839 AKAP3O75969 853 aa14.47□□□□□ -0.09
ACTN1-202ENST00000376839 ERLIN2O94905 339 aa14.47□□□□□ -0.09
ACTN1-202ENST00000376839 AFPP02771 609 aaKnown RBP14.47□□□□□ -0.09
ACTN1-202ENST00000376839 ZBTB48P10074 688 aaPredicted RBP14.47□□□□□ -0.09
ACTN1-202ENST00000376839 HSPA9P38646 679 aaKnown RBP14.47□□□□□ -0.09
ACTN1-202ENST00000376839 PPARDQ03181 441 aa14.47□□□□□ -0.09
ACTN1-202ENST00000376839 EXOC3L4Q17RC7 722 aa14.47□□□□□ -0.09
ACTN1-202ENST00000376839 CEP85LQ5SZL2 805 aa14.47□□□□□ -0.09
ACTN1-202ENST00000376839 GJB7Q6PEY0 223 aa14.47□□□□□ -0.09
ACTN1-202ENST00000376839 MAATS1Q7Z4T9 603 aa14.47□□□□□ -0.09
ACTN1-202ENST00000376839 PLCB1Q9NQ66 1216 aa14.47□□□□□ -0.09
ACTN1-202ENST00000376839 USP40Q9NVE5 1235 aa14.47□□□□□ -0.09
ACTN1-202ENST00000376839 SWAP70Q9UH65 585 aa14.47□□□□□ -0.09
ACTN1-202ENST00000376839 PCDHA1Q9Y5I3 950 aa14.47□□□□□ -0.09
ACTN1-202ENST00000376839 TAF1LQ8IZX4 1826 aa14.47□□□□□ -0.09
ACTN1-202ENST00000376839 RSPH10B2B2RC85 870 aa14.47□□□□□ -0.09
ACTN1-202ENST00000376839 RSPH10BP0C881 870 aa14.47□□□□□ -0.09
ACTN1-202ENST00000376839 SCNN1DP51172 638 aa14.47□□□□□ -0.09
ACTN1-202ENST00000376839 SF3B2Q13435 895 aaKnown RBP14.47□□□□□ -0.09
ACTN1-202ENST00000376839 KNOP1Q1ED39 458 aaKnown RBP14.47□□□□□ -0.09
ACTN1-202ENST00000376839 PRR16Q569H4 304 aa14.47□□□□□ -0.09
ACTN1-202ENST00000376839 ALKBH5Q6P6C2 394 aaKnown RBP14.47□□□□□ -0.09
ACTN1-202ENST00000376839 ETNPPLQ8TBG4 499 aa14.47□□□□□ -0.09
ACTN1-202ENST00000376839 SCFD2Q8WU76 684 aa14.47□□□□□ -0.09
ACTN1-202ENST00000376839 RBM17Q96I25 401 aaKnown RBP14.47□□□□□ -0.09
ACTN1-202ENST00000376839 ATP6V1G3Q96LB4 118 aa14.47□□□□□ -0.09
ACTN1-202ENST00000376839 C8orf37Q96NL8 207 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms