RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 C11orf16Q9NQ32 467 aa17.12■□□□□ 0.33
CLCN6-204ENST00000376491 ANO2Q9NQ90 1003 aa17.12■□□□□ 0.33
CLCN6-204ENST00000376491 CDY2AQ9Y6F7 541 aa17.12■□□□□ 0.33
CLCN6-204ENST00000376491 ENPP3O14638 875 aa17.11■□□□□ 0.33
CLCN6-204ENST00000376491 INSRRP14616 1297 aa17.11■□□□□ 0.33
CLCN6-204ENST00000376491 IGBP1P78318 339 aa17.11■□□□□ 0.33
CLCN6-204ENST00000376491 FUT2Q10981 343 aa17.11■□□□□ 0.33
CLCN6-204ENST00000376491 TIGD5Q53EQ6 642 aa17.11■□□□□ 0.33
CLCN6-204ENST00000376491 TCEAL5Q5H9L2 206 aa17.11■□□□□ 0.33
CLCN6-204ENST00000376491 APOA5Q6Q788 366 aa17.11■□□□□ 0.33
CLCN6-204ENST00000376491 NEK9Q8TD19 979 aa17.11■□□□□ 0.33
CLCN6-204ENST00000376491 PGBD1Q96JS3 809 aa17.11■□□□□ 0.33
CLCN6-204ENST00000376491 TCEANC2Q96MN5 208 aa17.11■□□□□ 0.33
CLCN6-204ENST00000376491 MXRA8Q9BRK3 442 aa17.11■□□□□ 0.33
CLCN6-204ENST00000376491 AGO3Q9H9G7 860 aaKnown RBP17.11■□□□□ 0.33
CLCN6-204ENST00000376491 JPH1Q9HDC5 661 aaPredicted RBP17.11■□□□□ 0.33
CLCN6-204ENST00000376491 KCNH7Q9NS40 1196 aa17.11■□□□□ 0.33
CLCN6-204ENST00000376491 C5orf67F2Z3F1 127 aa17.1■□□□□ 0.33
CLCN6-204ENST00000376491 ARP10275 920 aa17.1■□□□□ 0.33
CLCN6-204ENST00000376491 EXOSC10Q01780 885 aaKnown RBP17.1■□□□□ 0.33
CLCN6-204ENST00000376491 PTCRAQ6ISU1 281 aaPredicted RBP17.1■□□□□ 0.33
CLCN6-204ENST00000376491 RSPH3Q86UC2 560 aa17.1■□□□□ 0.33
CLCN6-204ENST00000376491 FIBCD1Q8N539 461 aa17.1■□□□□ 0.33
CLCN6-204ENST00000376491 LINC01599Q8WXQ3 324 aa17.1■□□□□ 0.33
CLCN6-204ENST00000376491 SLC9A2Q9UBY0 812 aa17.1■□□□□ 0.33
CLCN6-204ENST00000376491 BRPF3Q9ULD4 1205 aa17.1■□□□□ 0.33
CLCN6-204ENST00000376491 GRXCR2A6NFK2 248 aa17.09■□□□□ 0.33
CLCN6-204ENST00000376491 H3BQ06 376 aaPredicted RBP17.09■□□□□ 0.33
CLCN6-204ENST00000376491 CTNNB1P35222 781 aa17.09■□□□□ 0.33
CLCN6-204ENST00000376491 MRPS6P82932 125 aaKnown RBP17.09■□□□□ 0.33
CLCN6-204ENST00000376491 COL19A1Q14993 1142 aa17.09■□□□□ 0.33
CLCN6-204ENST00000376491 PLCB4Q15147 1175 aa17.09■□□□□ 0.33
CLCN6-204ENST00000376491 TMEM31Q5JXX7 168 aa17.09■□□□□ 0.33
CLCN6-204ENST00000376491 RTN4RL1Q86UN2 441 aaPredicted RBP17.09■□□□□ 0.33
CLCN6-204ENST00000376491 TRAPPC12Q8WVT3 735 aa17.09■□□□□ 0.33
CLCN6-204ENST00000376491 ZNF689Q96CS4 500 aaPredicted RBP17.09■□□□□ 0.33
CLCN6-204ENST00000376491 PABPC5Q96DU9 382 aaKnown RBP17.09■□□□□ 0.33
CLCN6-204ENST00000376491 NEK1Q96PY6 1258 aa17.09■□□□□ 0.33
CLCN6-204ENST00000376491 FAM49AQ9H0Q0 323 aaPredicted RBP17.09■□□□□ 0.33
CLCN6-204ENST00000376491 NSUN3Q9H649 340 aaKnown RBP17.09■□□□□ 0.33
CLCN6-204ENST00000376491 RIC8AQ9NPQ8 531 aa17.09■□□□□ 0.33
CLCN6-204ENST00000376491 ADGRA3Q8IWK6 1321 aa17.09■□□□□ 0.33
CLCN6-204ENST00000376491 KIAA1671Q9BY89 1806 aa17.09■□□□□ 0.33
CLCN6-204ENST00000376491 EVPLQ92817 2033 aa17.09■□□□□ 0.33
CLCN6-204ENST00000376491 NFASCO94856 1347 aa17.08■□□□□ 0.32
CLCN6-204ENST00000376491 RRN3P2A6NIE6 340 aa17.08■□□□□ 0.32
CLCN6-204ENST00000376491 PI4K2BG5E9Z4 385 aa17.08■□□□□ 0.32
CLCN6-204ENST00000376491 GRM6O15303 877 aa17.08■□□□□ 0.32
CLCN6-204ENST00000376491 CD52P31358 61 aa17.08■□□□□ 0.32
CLCN6-204ENST00000376491 BMPR1AP36894 532 aa17.08■□□□□ 0.32
CLCN6-204ENST00000376491 PLA2G5P39877 138 aa17.08■□□□□ 0.32
CLCN6-204ENST00000376491 NAPAP54920 295 aa17.08■□□□□ 0.32
CLCN6-204ENST00000376491 ACTR2P61160 394 aa17.08■□□□□ 0.32
CLCN6-204ENST00000376491 ITGB3BPQ13352 177 aaPredicted RBP17.08■□□□□ 0.32
CLCN6-204ENST00000376491 ADCK5Q3MIX3 580 aa17.08■□□□□ 0.32
CLCN6-204ENST00000376491 SYNE3Q6ZMZ3 975 aa17.08■□□□□ 0.32
CLCN6-204ENST00000376491 TSHZ1Q6ZSZ6 1077 aa17.08■□□□□ 0.32
CLCN6-204ENST00000376491 RASEFQ8IZ41 740 aa17.08■□□□□ 0.32
CLCN6-204ENST00000376491 GJD3Q8N144 294 aa17.08■□□□□ 0.32
CLCN6-204ENST00000376491 ANO3Q9BYT9 981 aa17.08■□□□□ 0.32
CLCN6-204ENST00000376491 FAM217BQ9NTX9 383 aaPredicted RBP17.08■□□□□ 0.32
CLCN6-204ENST00000376491 RBM28Q9NW13 759 aaKnown RBP17.08■□□□□ 0.32
CLCN6-204ENST00000376491 TMEM260Q9NX78 707 aa17.08■□□□□ 0.32
CLCN6-204ENST00000376491 V9GY48 417 aaPredicted RBP17.08■□□□□ 0.32
CLCN6-204ENST00000376491 FAM86C2PA6NEL3 165 aa17.07■□□□□ 0.32
CLCN6-204ENST00000376491 STXBP3O00186 592 aa17.07■□□□□ 0.32
CLCN6-204ENST00000376491 GPR37L1O60883 481 aa17.07■□□□□ 0.32
CLCN6-204ENST00000376491 DGKIO75912 1065 aa17.07■□□□□ 0.32
CLCN6-204ENST00000376491 RB1P06400 928 aa17.07■□□□□ 0.32
CLCN6-204ENST00000376491 STAT5BP51692 787 aa17.07■□□□□ 0.32
CLCN6-204ENST00000376491 TMEM62Q0P6H9 643 aa17.07■□□□□ 0.32
CLCN6-204ENST00000376491 RTN1Q16799 776 aa17.07■□□□□ 0.32
CLCN6-204ENST00000376491 BMP2KLQ5H9B9 411 aa17.07■□□□□ 0.32
CLCN6-204ENST00000376491 DHX32Q7L7V1 743 aaKnown RBP17.07■□□□□ 0.32
CLCN6-204ENST00000376491 CRIPAKQ8N1N5 446 aa17.07■□□□□ 0.32
CLCN6-204ENST00000376491 CLP1Q92989 425 aaKnown RBP17.07■□□□□ 0.32
CLCN6-204ENST00000376491 AZI2Q9H6S1 392 aa17.07■□□□□ 0.32
CLCN6-204ENST00000376491 AGO4Q9HCK5 861 aaKnown RBP17.07■□□□□ 0.32
CLCN6-204ENST00000376491 TRPC6Q9Y210 931 aa17.07■□□□□ 0.32
CLCN6-204ENST00000376491 PCDHA2Q9Y5H9 948 aa17.07■□□□□ 0.32
CLCN6-204ENST00000376491 POTEB3A0JP26 581 aa17.06■□□□□ 0.32
CLCN6-204ENST00000376491 MEIS1O00470 390 aa17.06■□□□□ 0.32
CLCN6-204ENST00000376491 ATG7O95352 703 aa17.06■□□□□ 0.32
CLCN6-204ENST00000376491 CDC27P30260 824 aa17.06■□□□□ 0.32
CLCN6-204ENST00000376491 LTBRP36941 435 aa17.06■□□□□ 0.32
CLCN6-204ENST00000376491 CLK2P49760 499 aaKnown RBP17.06■□□□□ 0.32
CLCN6-204ENST00000376491 ADCY7P51828 1080 aa17.06■□□□□ 0.32
CLCN6-204ENST00000376491 BTG3Q14201 252 aaPredicted RBP17.06■□□□□ 0.32
CLCN6-204ENST00000376491 TSGA10IPQ3SY00 556 aa17.06■□□□□ 0.32
CLCN6-204ENST00000376491 CEP55Q53EZ4 464 aa17.06■□□□□ 0.32
CLCN6-204ENST00000376491 RNF20Q5VTR2 975 aa17.06■□□□□ 0.32
CLCN6-204ENST00000376491 IER5Q5VY09 327 aa17.06■□□□□ 0.32
CLCN6-204ENST00000376491 PPP1R18Q6NYC8 613 aa17.06■□□□□ 0.32
CLCN6-204ENST00000376491 POTEBQ6S5H4 581 aa17.06■□□□□ 0.32
CLCN6-204ENST00000376491 EP400NLQ6ZTU2 488 aa17.06■□□□□ 0.32
CLCN6-204ENST00000376491 PLPPR4Q7Z2D5 763 aa17.06■□□□□ 0.32
CLCN6-204ENST00000376491 SDF4Q9BRK5 362 aa17.06■□□□□ 0.32
CLCN6-204ENST00000376491 C11orf84Q9BUA3 381 aaPredicted RBP17.06■□□□□ 0.32
CLCN6-204ENST00000376491 LMAN2LQ9H0V9 348 aa17.06■□□□□ 0.32
CLCN6-204ENST00000376491 TRPV2Q9Y5S1 764 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms