RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 GDF3Q9NR23 364 aa13.3□□□□□ -0.28
C9orf3-203ENST00000375315 PAPOLBQ9NRJ5 636 aaKnown RBP13.3□□□□□ -0.28
C9orf3-203ENST00000375315 CAPN11Q9UMQ6 739 aa13.3□□□□□ -0.28
C9orf3-203ENST00000375315 PLAAQ9Y263 795 aa13.3□□□□□ -0.28
C9orf3-203ENST00000375315 L3MBTL1Q9Y468 752 aa13.3□□□□□ -0.28
C9orf3-203ENST00000375315 CCT8L1PA6NM43 557 aa13.29□□□□□ -0.28
C9orf3-203ENST00000375315 DIAPH2O60879 1101 aa13.29□□□□□ -0.28
C9orf3-203ENST00000375315 IFNAR1P17181 557 aa13.29□□□□□ -0.28
C9orf3-203ENST00000375315 CARSP49589 748 aaKnown RBP13.29□□□□□ -0.28
C9orf3-203ENST00000375315 GUCY2FP51841 1108 aa13.29□□□□□ -0.28
C9orf3-203ENST00000375315 TBC1D25Q3MII6 688 aa13.29□□□□□ -0.28
C9orf3-203ENST00000375315 LRIG3Q6UXM1 1119 aa13.29□□□□□ -0.28
C9orf3-203ENST00000375315 SAMD7Q7Z3H4 446 aa13.29□□□□□ -0.28
C9orf3-203ENST00000375315 L3MBTL3Q96JM7 780 aaPredicted RBP13.29□□□□□ -0.28
C9orf3-203ENST00000375315 ALS2CR12Q96Q35 445 aa13.29□□□□□ -0.28
C9orf3-203ENST00000375315 TAF1DQ9H5J8 278 aaPredicted RBP13.29□□□□□ -0.28
C9orf3-203ENST00000375315 CABP5Q9NP86 173 aa13.29□□□□□ -0.28
C9orf3-203ENST00000375315 SWAP70Q9UH65 585 aa13.29□□□□□ -0.28
C9orf3-203ENST00000375315 FZD1Q9UP38 647 aa13.29□□□□□ -0.28
C9orf3-203ENST00000375315 PCDHGC5Q9Y5F6 944 aa13.29□□□□□ -0.28
C9orf3-203ENST00000375315 SRPRBQ9Y5M8 271 aaKnown RBP13.29□□□□□ -0.28
C9orf3-203ENST00000375315 RCCD1A6NED2 376 aa13.29□□□□□ -0.28
C9orf3-203ENST00000375315 ADAMTS3O15072 1205 aa13.29□□□□□ -0.28
C9orf3-203ENST00000375315 FAM153BP0C7A2 387 aa13.29□□□□□ -0.28
C9orf3-203ENST00000375315 SNAP25P60880 206 aa13.29□□□□□ -0.28
C9orf3-203ENST00000375315 BIRC3Q13489 604 aa13.29□□□□□ -0.28
C9orf3-203ENST00000375315 SPA17Q15506 151 aa13.29□□□□□ -0.28
C9orf3-203ENST00000375315 FAM153CQ494X1 144 aa13.29□□□□□ -0.28
C9orf3-203ENST00000375315 TBC1D10BQ4KMP7 808 aaPredicted RBP13.29□□□□□ -0.28
C9orf3-203ENST00000375315 RILPL1Q5EBL4 403 aa13.29□□□□□ -0.28
C9orf3-203ENST00000375315 RUFY4Q6ZNE9 571 aa13.29□□□□□ -0.28
C9orf3-203ENST00000375315 HEATR3Q7Z4Q2 680 aa13.29□□□□□ -0.28
C9orf3-203ENST00000375315 CSRNP1Q96S65 589 aa13.29□□□□□ -0.28
C9orf3-203ENST00000375315 EPB41L5Q9HCM4 733 aa13.29□□□□□ -0.28
C9orf3-203ENST00000375315 FAM198AQ9UFP1 575 aa13.29□□□□□ -0.28
C9orf3-203ENST00000375315 FAM153AQ9UHL3 310 aa13.29□□□□□ -0.28
C9orf3-203ENST00000375315 SLC12A6Q9UHW9 1150 aa13.29□□□□□ -0.28
C9orf3-203ENST00000375315 USP17L5A8MUK1 530 aa13.28□□□□□ -0.28
C9orf3-203ENST00000375315 FMNL1O95466 1100 aaPredicted RBP13.28□□□□□ -0.28
C9orf3-203ENST00000375315 IKQ13123 557 aaPredicted RBP13.28□□□□□ -0.28
C9orf3-203ENST00000375315 BYSLQ13895 437 aaKnown RBP13.28□□□□□ -0.28
C9orf3-203ENST00000375315 MEA1Q16626 185 aa13.28□□□□□ -0.28
C9orf3-203ENST00000375315 CCDC96Q2M329 555 aa13.28□□□□□ -0.28
C9orf3-203ENST00000375315 CCDC38Q502W7 563 aa13.28□□□□□ -0.28
C9orf3-203ENST00000375315 WDR59Q6PJI9 974 aa13.28□□□□□ -0.28
C9orf3-203ENST00000375315 SPICE1Q8N0Z3 855 aa13.28□□□□□ -0.28
C9orf3-203ENST00000375315 CCDC197Q8NCU1 140 aa13.28□□□□□ -0.28
C9orf3-203ENST00000375315 ZFATQ9P243 1243 aa13.28□□□□□ -0.28
C9orf3-203ENST00000375315 RWDD2AQ9UIY3 292 aa13.28□□□□□ -0.28
C9orf3-203ENST00000375315 WDR19Q8NEZ3 1342 aa13.28□□□□□ -0.28
C9orf3-203ENST00000375315 A0A1W2PQC6 194 aa13.28□□□□□ -0.28
C9orf3-203ENST00000375315 HEXIM1O94992 359 aaKnown RBP13.28□□□□□ -0.28
C9orf3-203ENST00000375315 GUCY2DQ02846 1103 aa13.28□□□□□ -0.28
C9orf3-203ENST00000375315 LAMB3Q13751 1172 aa13.28□□□□□ -0.28
C9orf3-203ENST00000375315 PRKG1Q13976 671 aa13.28□□□□□ -0.28
C9orf3-203ENST00000375315 KCTD1Q719H9 257 aa13.28□□□□□ -0.28
C9orf3-203ENST00000375315 AGAP11Q8TF27 550 aa13.28□□□□□ -0.28
C9orf3-203ENST00000375315 FAM163AQ96GL9 167 aaPredicted RBP13.28□□□□□ -0.28
C9orf3-203ENST00000375315 TMEM39BQ9GZU3 492 aa13.28□□□□□ -0.28
C9orf3-203ENST00000375315 SLC5A4Q9NY91 659 aa13.28□□□□□ -0.28
C9orf3-203ENST00000375315 DUSP10Q9Y6W6 482 aa13.28□□□□□ -0.28
C9orf3-203ENST00000375315 SCN9AQ15858 1988 aa13.28□□□□□ -0.28
C9orf3-203ENST00000375315 A6NHS1 94 aa13.28□□□□□ -0.28
C9orf3-203ENST00000375315 KIF4AO95239 1232 aa13.28□□□□□ -0.28
C9orf3-203ENST00000375315 PAEPP09466 180 aa13.28□□□□□ -0.28
C9orf3-203ENST00000375315 LINGO3P0C6S8 592 aa13.28□□□□□ -0.28
C9orf3-203ENST00000375315 CDC25CP30307 473 aa13.28□□□□□ -0.28
C9orf3-203ENST00000375315 GCLCP48506 637 aaPredicted RBP13.28□□□□□ -0.28
C9orf3-203ENST00000375315 NLRP5P59047 1200 aa13.28□□□□□ -0.28
C9orf3-203ENST00000375315 PAK1Q13153 545 aa13.28□□□□□ -0.28
C9orf3-203ENST00000375315 RSBN1LQ6PCB5 846 aaPredicted RBP13.28□□□□□ -0.28
C9orf3-203ENST00000375315 C16orf86Q6ZW13 317 aa13.28□□□□□ -0.28
C9orf3-203ENST00000375315 CCDC155Q8N6L0 562 aa13.28□□□□□ -0.28
C9orf3-203ENST00000375315 MB21D1Q8N884 522 aa13.28□□□□□ -0.28
C9orf3-203ENST00000375315 PAGE5Q96GU1 130 aa13.28□□□□□ -0.28
C9orf3-203ENST00000375315 NDST4Q9H3R1 872 aa13.28□□□□□ -0.28
C9orf3-203ENST00000375315 NHEJ1Q9H9Q4 299 aaPredicted RBP13.28□□□□□ -0.28
C9orf3-203ENST00000375315 CHCHD3Q9NX63 227 aaKnown RBP13.28□□□□□ -0.28
C9orf3-203ENST00000375315 ASTN2O75129 1339 aaPredicted RBP13.27□□□□□ -0.28
C9orf3-203ENST00000375315 GOLGA6L10A0A0M3HER8 536 aa13.27□□□□□ -0.28
C9orf3-203ENST00000375315 KLRF2D3W0D1 207 aa13.27□□□□□ -0.28
C9orf3-203ENST00000375315 NFKBIEO00221 500 aa13.27□□□□□ -0.28
C9orf3-203ENST00000375315 SMIM24O75264 130 aa13.27□□□□□ -0.28
C9orf3-203ENST00000375315 CCND1P24385 295 aa13.27□□□□□ -0.28
C9orf3-203ENST00000375315 KIF5BP33176 963 aa13.27□□□□□ -0.28
C9orf3-203ENST00000375315 PPP2R2AP63151 447 aa13.27□□□□□ -0.28
C9orf3-203ENST00000375315 RRAGBQ5VZM2 374 aa13.27□□□□□ -0.28
C9orf3-203ENST00000375315 HHIPL2Q6UWX4 724 aa13.27□□□□□ -0.28
C9orf3-203ENST00000375315 SH3BP5LQ7L8J4 393 aa13.27□□□□□ -0.28
C9orf3-203ENST00000375315 RAPGEF5Q92565 580 aa13.27□□□□□ -0.28
C9orf3-203ENST00000375315 MOV10L1Q9BXT6 1211 aaKnown RBP13.27□□□□□ -0.28
C9orf3-203ENST00000375315 ZNF287Q9HBT7 754 aa13.27□□□□□ -0.28
C9orf3-203ENST00000375315 PLCB1Q9NQ66 1216 aa13.27□□□□□ -0.28
C9orf3-203ENST00000375315 RBM12Q9NTZ6 932 aaKnown RBP13.27□□□□□ -0.28
C9orf3-203ENST00000375315 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.27□□□□□ -0.28
C9orf3-203ENST00000375315 RGL1Q9NZL6 768 aa13.27□□□□□ -0.28
C9orf3-203ENST00000375315 TMOD2Q9NZR1 351 aa13.27□□□□□ -0.28
C9orf3-203ENST00000375315 ZNRF3Q9ULT6 936 aa13.27□□□□□ -0.28
C9orf3-203ENST00000375315 RPS6KL1Q9Y6S9 549 aa13.27□□□□□ -0.28
C9orf3-203ENST00000375315 CCDC88AQ3V6T2 1871 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms