RNA–Protein interactions for RNA: ENST00000375167.1

H2AFX-201, Transcript of H2A histone family member X, humanhuman

TSL 2

Gene H2AFX, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-201ENST00000375167 MLXIPQ9HAP2 919 aa20.35■□□□□ 0.85
H2AFX-201ENST00000375167 PXMP2Q9NR77 195 aa20.35■□□□□ 0.85
H2AFX-201ENST00000375167 M0R2C6 588 aa20.34■□□□□ 0.85
H2AFX-201ENST00000375167 FSCN2O14926 492 aa20.34■□□□□ 0.85
H2AFX-201ENST00000375167 RNF113AO15541 343 aaKnown RBP20.34■□□□□ 0.85
H2AFX-201ENST00000375167 FGF18O76093 207 aa20.34■□□□□ 0.85
H2AFX-201ENST00000375167 ZFYP08048 801 aaPredicted RBP20.34■□□□□ 0.85
H2AFX-201ENST00000375167 PDHBP11177 359 aa20.34■□□□□ 0.85
H2AFX-201ENST00000375167 UBA1P22314 1058 aaKnown RBP20.34■□□□□ 0.85
H2AFX-201ENST00000375167 TSHZ1Q6ZSZ6 1077 aa20.34■□□□□ 0.85
H2AFX-201ENST00000375167 THNSL1Q8IYQ7 743 aa20.34■□□□□ 0.85
H2AFX-201ENST00000375167 KBTBD3Q8NAB2 608 aa20.34■□□□□ 0.85
H2AFX-201ENST00000375167 LMBR1Q8WVP7 490 aa20.34■□□□□ 0.85
H2AFX-201ENST00000375167 LINC01599Q8WXQ3 324 aa20.34■□□□□ 0.85
H2AFX-201ENST00000375167 CASP10Q92851 521 aa20.34■□□□□ 0.85
H2AFX-201ENST00000375167 ADAM7Q9H2U9 754 aa20.34■□□□□ 0.85
H2AFX-201ENST00000375167 NOP56O00567 594 aaKnown RBP20.34■□□□□ 0.85
H2AFX-201ENST00000375167 RAB11FIP3O75154 756 aa20.34■□□□□ 0.85
H2AFX-201ENST00000375167 ATXN1P54253 815 aaKnown RBP20.34■□□□□ 0.85
H2AFX-201ENST00000375167 ZNF543Q08ER8 600 aa20.34■□□□□ 0.85
H2AFX-201ENST00000375167 ACAP1Q15027 740 aa20.34■□□□□ 0.85
H2AFX-201ENST00000375167 FBXO47Q5MNV8 452 aa20.34■□□□□ 0.85
H2AFX-201ENST00000375167 TAF2Q6P1X5 1199 aa20.34■□□□□ 0.85
H2AFX-201ENST00000375167 SIX5Q8N196 739 aa20.34■□□□□ 0.85
H2AFX-201ENST00000375167 CRIPAKQ8N1N5 446 aa20.34■□□□□ 0.85
H2AFX-201ENST00000375167 PANK1Q8TE04 598 aa20.34■□□□□ 0.85
H2AFX-201ENST00000375167 RIN2Q8WYP3 895 aaPredicted RBP20.34■□□□□ 0.85
H2AFX-201ENST00000375167 TMEM47Q9BQJ4 181 aa20.34■□□□□ 0.85
H2AFX-201ENST00000375167 USP26Q9BXU7 913 aa20.34■□□□□ 0.85
H2AFX-201ENST00000375167 FTHL17Q9BXU8 183 aa20.34■□□□□ 0.85
H2AFX-201ENST00000375167 ERVK-5Q9HDB9 667 aa20.34■□□□□ 0.85
H2AFX-201ENST00000375167 RNF216Q9NWF9 866 aaPredicted RBP20.34■□□□□ 0.85
H2AFX-201ENST00000375167 TMEM260Q9NX78 707 aa20.34■□□□□ 0.85
H2AFX-201ENST00000375167 RALYQ9UKM9 306 aaKnown RBP20.34■□□□□ 0.85
H2AFX-201ENST00000375167 CDV3Q9UKY7 258 aaKnown RBP20.34■□□□□ 0.85
H2AFX-201ENST00000375167 ZNF215Q9UL58 517 aaPredicted RBP20.34■□□□□ 0.85
H2AFX-201ENST00000375167 LRFN2Q9ULH4 789 aa20.34■□□□□ 0.85
H2AFX-201ENST00000375167 ARP10275 920 aa20.33■□□□□ 0.84
H2AFX-201ENST00000375167 MYCLP12524 364 aaPredicted RBP20.33■□□□□ 0.84
H2AFX-201ENST00000375167 RFX1P22670 979 aa20.33■□□□□ 0.84
H2AFX-201ENST00000375167 ADAM17P78536 824 aa20.33■□□□□ 0.84
H2AFX-201ENST00000375167 MGAT3Q09327 533 aa20.33■□□□□ 0.84
H2AFX-201ENST00000375167 ENTPD7Q9NQZ7 604 aa20.33■□□□□ 0.84
H2AFX-201ENST00000375167 MYH6P13533 1939 aa20.32■□□□□ 0.84
H2AFX-201ENST00000375167 ADRB1P08588 477 aa20.32■□□□□ 0.84
H2AFX-201ENST00000375167 TGFB3P10600 412 aa20.32■□□□□ 0.84
H2AFX-201ENST00000375167 HSPD1P10809 573 aaKnown RBP20.32■□□□□ 0.84
H2AFX-201ENST00000375167 SCG2P13521 617 aa20.32■□□□□ 0.84
H2AFX-201ENST00000375167 GATMP50440 423 aa20.32■□□□□ 0.84
H2AFX-201ENST00000375167 USTQ9Y2C2 406 aa20.32■□□□□ 0.84
H2AFX-201ENST00000375167 STK25O00506 426 aa20.31■□□□□ 0.84
H2AFX-201ENST00000375167 HMMRO75330 724 aa20.31■□□□□ 0.84
H2AFX-201ENST00000375167 CTDSPL2Q05D32 466 aa20.31■□□□□ 0.84
H2AFX-201ENST00000375167 GPR161Q8N6U8 529 aaKnown RBP20.31■□□□□ 0.84
H2AFX-201ENST00000375167 TCF25Q9BQ70 676 aa20.31■□□□□ 0.84
H2AFX-201ENST00000375167 NCDNQ9UBB6 729 aa20.31■□□□□ 0.84
H2AFX-201ENST00000375167 DBR1Q9UK59 544 aaKnown RBP20.31■□□□□ 0.84
H2AFX-201ENST00000375167 LZTS1Q9Y250 596 aa20.31■□□□□ 0.84
H2AFX-201ENST00000375167 SUPT16HQ9Y5B9 1047 aaKnown RBP20.31■□□□□ 0.84
H2AFX-201ENST00000375167 FNDC1Q4ZHG4 1894 aaPredicted RBP20.3■□□□□ 0.84
H2AFX-201ENST00000375167 NRCAMQ92823 1304 aa20.3■□□□□ 0.84
H2AFX-201ENST00000375167 CD52P31358 61 aa20.3■□□□□ 0.84
H2AFX-201ENST00000375167 SP2Q02086 613 aa20.3■□□□□ 0.84
H2AFX-201ENST00000375167 APOBRQ0VD83 1088 aa20.3■□□□□ 0.84
H2AFX-201ENST00000375167 TDGQ13569 410 aa20.3■□□□□ 0.84
H2AFX-201ENST00000375167 CDC37Q16543 378 aaPredicted RBP20.3■□□□□ 0.84
H2AFX-201ENST00000375167 RUFY4Q6ZNE9 571 aa20.3■□□□□ 0.84
H2AFX-201ENST00000375167 NGRNQ9NPE2 291 aaKnown RBP20.3■□□□□ 0.84
H2AFX-201ENST00000375167 CYP26B1Q9NR63 512 aa20.3■□□□□ 0.84
H2AFX-201ENST00000375167 PUF60Q9UHX1 559 aaKnown RBP20.3■□□□□ 0.84
H2AFX-201ENST00000375167 DUSP12Q9UNI6 340 aa20.3■□□□□ 0.84
H2AFX-201ENST00000375167 GPR179Q6PRD1 2367 aa20.3■□□□□ 0.84
H2AFX-201ENST00000375167 PRR5-ARHGAP8B1AHC4 643 aa20.29■□□□□ 0.84
H2AFX-201ENST00000375167 ARHGAP8P85298 464 aa20.29■□□□□ 0.84
H2AFX-201ENST00000375167 TRIM50Q86XT4 487 aa20.29■□□□□ 0.84
H2AFX-201ENST00000375167 PDCD2LQ9BRP1 358 aa20.29■□□□□ 0.84
H2AFX-201ENST00000375167 AGO3Q9H9G7 860 aaKnown RBP20.29■□□□□ 0.84
H2AFX-201ENST00000375167 MRPL11Q9Y3B7 192 aaKnown RBP20.29■□□□□ 0.84
H2AFX-201ENST00000375167 CDY2AQ9Y6F7 541 aa20.29■□□□□ 0.84
H2AFX-201ENST00000375167 HIDE1A8MVS5 230 aa20.28■□□□□ 0.84
H2AFX-201ENST00000375167 KINO60870 393 aaKnown RBP20.28■□□□□ 0.84
H2AFX-201ENST00000375167 EOMESO95936 686 aa20.28■□□□□ 0.84
H2AFX-201ENST00000375167 CFBP00751 764 aa20.28■□□□□ 0.84
H2AFX-201ENST00000375167 SP9P0CG40 484 aa20.28■□□□□ 0.84
H2AFX-201ENST00000375167 LMNB2Q03252 620 aa20.28■□□□□ 0.84
H2AFX-201ENST00000375167 GPATCH4Q5T3I0 446 aaKnown RBP20.28■□□□□ 0.84
H2AFX-201ENST00000375167 RTN4RL1Q86UN2 441 aaPredicted RBP20.28■□□□□ 0.84
H2AFX-201ENST00000375167 COLGALT1Q8NBJ5 622 aa20.28■□□□□ 0.84
H2AFX-201ENST00000375167 SUMF1Q8NBK3 374 aa20.28■□□□□ 0.84
H2AFX-201ENST00000375167 COL26A1Q96A83 441 aa20.28■□□□□ 0.84
H2AFX-201ENST00000375167 RTKNQ9BST9 563 aa20.28■□□□□ 0.84
H2AFX-201ENST00000375167 HCFC2Q9Y5Z7 792 aa20.28■□□□□ 0.84
H2AFX-201ENST00000375167 DENND4AQ7Z401 1863 aa20.27■□□□□ 0.84
H2AFX-201ENST00000375167 ORC4O43929 436 aa20.27■□□□□ 0.84
H2AFX-201ENST00000375167 IBSPP21815 317 aaPredicted RBP20.27■□□□□ 0.84
H2AFX-201ENST00000375167 KIAA1841Q6NSI8 718 aa20.27■□□□□ 0.84
H2AFX-201ENST00000375167 MRPS27Q92552 414 aaKnown RBP20.27■□□□□ 0.84
H2AFX-201ENST00000375167 ACSF2Q96CM8 615 aaPredicted RBP20.27■□□□□ 0.84
H2AFX-201ENST00000375167 TOMM22Q9NS69 142 aa20.27■□□□□ 0.84
H2AFX-201ENST00000375167 DCDC2BA2VCK2 349 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms