RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 SPAG5Q96R06 1193 aa18.78■□□□□ 0.6
RXRB-201ENST00000374680 H0YIN7 160 aa18.78■□□□□ 0.6
RXRB-201ENST00000374680 NMT1P30419 496 aaKnown RBP18.78■□□□□ 0.6
RXRB-201ENST00000374680 PPP1R18Q6NYC8 613 aa18.78■□□□□ 0.6
RXRB-201ENST00000374680 ALS2CR12Q96Q35 445 aa18.78■□□□□ 0.6
RXRB-201ENST00000374680 KCTD10Q9H3F6 313 aa18.78■□□□□ 0.6
RXRB-201ENST00000374680 HDAC9Q9UKV0 1011 aa18.78■□□□□ 0.6
RXRB-201ENST00000374680 KDM3AQ9Y4C1 1321 aa18.77■□□□□ 0.6
RXRB-201ENST00000374680 CCDC66A2RUB6 948 aa18.77■□□□□ 0.6
RXRB-201ENST00000374680 TMCO5BA8MYB1 307 aa18.77■□□□□ 0.6
RXRB-201ENST00000374680 NOP2P46087 812 aaKnown RBP18.77■□□□□ 0.6
RXRB-201ENST00000374680 FAM204AQ9H8W3 233 aa18.77■□□□□ 0.6
RXRB-201ENST00000374680 FBXO28Q9NVF7 368 aa18.77■□□□□ 0.6
RXRB-201ENST00000374680 ANKRD65E5RJM6 399 aa18.77■□□□□ 0.6
RXRB-201ENST00000374680 USP11P51784 963 aa18.77■□□□□ 0.6
RXRB-201ENST00000374680 TRIM59Q8IWR1 403 aa18.77■□□□□ 0.6
RXRB-201ENST00000374680 ETNPPLQ8TBG4 499 aa18.77■□□□□ 0.6
RXRB-201ENST00000374680 IFT81Q8WYA0 676 aa18.77■□□□□ 0.6
RXRB-201ENST00000374680 TSGA10Q9BZW7 698 aa18.77■□□□□ 0.6
RXRB-201ENST00000374680 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.77■□□□□ 0.63e-8■■□□□ 13.7
RXRB-201ENST00000374680 RBM12Q9NTZ6 932 aaKnown RBP18.77■□□□□ 0.6
RXRB-201ENST00000374680 NYAP2Q9P242 653 aa18.77■□□□□ 0.6
RXRB-201ENST00000374680 PRR12Q9ULL5 1215 aa18.77■□□□□ 0.6
RXRB-201ENST00000374680 GGCXP38435 758 aa18.77■□□□□ 0.59
RXRB-201ENST00000374680 FOXR1Q6PIV2 292 aa18.77■□□□□ 0.59
RXRB-201ENST00000374680 PURBQ96QR8 312 aaKnown RBP18.77■□□□□ 0.59
RXRB-201ENST00000374680 SELENOOQ9BVL4 669 aa18.77■□□□□ 0.59
RXRB-201ENST00000374680 TLR10Q9BXR5 811 aa18.77■□□□□ 0.59
RXRB-201ENST00000374680 ZNF831Q5JPB2 1677 aa18.76■□□□□ 0.59
RXRB-201ENST00000374680 OPLAHO14841 1288 aa18.76■□□□□ 0.59
RXRB-201ENST00000374680 AKAP3O75969 853 aa18.76■□□□□ 0.59
RXRB-201ENST00000374680 HOXD13P35453 343 aa18.76■□□□□ 0.59
RXRB-201ENST00000374680 COG2Q14746 738 aa18.76■□□□□ 0.59
RXRB-201ENST00000374680 TTC19Q6DKK2 380 aaPredicted RBP18.76■□□□□ 0.59
RXRB-201ENST00000374680 TMEM179Q6ZVK1 233 aa18.76■□□□□ 0.59
RXRB-201ENST00000374680 LENG9Q96B70 501 aa18.76■□□□□ 0.59
RXRB-201ENST00000374680 NOX5Q96PH1 765 aa18.76■□□□□ 0.59
RXRB-201ENST00000374680 ARMCX3Q9UH62 379 aaPredicted RBP18.76■□□□□ 0.59
RXRB-201ENST00000374680 PPIP5K2O43314 1243 aa18.76■□□□□ 0.59
RXRB-201ENST00000374680 RNF40O75150 1001 aa18.76■□□□□ 0.59
RXRB-201ENST00000374680 SPIRE1Q08AE8 756 aa18.76■□□□□ 0.59
RXRB-201ENST00000374680 SEMA3FQ13275 785 aa18.76■□□□□ 0.59
RXRB-201ENST00000374680 STRIP1Q5VSL9 837 aa18.76■□□□□ 0.59
RXRB-201ENST00000374680 KLHDC7AQ5VTJ3 777 aa18.76■□□□□ 0.59
RXRB-201ENST00000374680 HAUS3Q68CZ6 603 aa18.76■□□□□ 0.59
RXRB-201ENST00000374680 CCNI2Q6ZMN8 369 aaPredicted RBP18.76■□□□□ 0.59
RXRB-201ENST00000374680 MYCT1Q8N699 235 aa18.76■□□□□ 0.59
RXRB-201ENST00000374680 DCAF4Q8WV16 495 aa18.76■□□□□ 0.59
RXRB-201ENST00000374680 EIF2AK1Q9BQI3 630 aaKnown RBP18.76■□□□□ 0.59
RXRB-201ENST00000374680 ZBTB21Q9ULJ3 1066 aa18.76■□□□□ 0.59
RXRB-201ENST00000374680 HNRNPH3P31942 346 aaKnown RBP18.75■□□□□ 0.59
RXRB-201ENST00000374680 TRADDQ15628 312 aa18.75■□□□□ 0.59
RXRB-201ENST00000374680 ZSCAN26Q16670 478 aa18.75■□□□□ 0.59
RXRB-201ENST00000374680 COBLL1Q53SF7 1204 aa18.75■□□□□ 0.59
RXRB-201ENST00000374680 WDR93Q6P2C0 686 aa18.75■□□□□ 0.59
RXRB-201ENST00000374680 SLFN12Q8IYM2 578 aa18.75■□□□□ 0.59
RXRB-201ENST00000374680 CEP72Q9P209 647 aa18.75■□□□□ 0.59
RXRB-201ENST00000374680 PAFAH1B1P43034 410 aa18.75■□□□□ 0.59
RXRB-201ENST00000374680 CDK17Q00537 523 aa18.75■□□□□ 0.59
RXRB-201ENST00000374680 ERMNQ8TAM6 284 aa18.75■□□□□ 0.59
RXRB-201ENST00000374680 DYDC2Q96IM9 177 aa18.75■□□□□ 0.59
RXRB-201ENST00000374680 TBCAO75347 108 aaKnown RBP18.74■□□□□ 0.59
RXRB-201ENST00000374680 PTK2Q05397 1052 aa18.74■□□□□ 0.59
RXRB-201ENST00000374680 ASIC2Q16515 512 aa18.74■□□□□ 0.59
RXRB-201ENST00000374680 GLIS2Q9BZE0 524 aaPredicted RBP18.74■□□□□ 0.59
RXRB-201ENST00000374680 AJAP1Q9UKB5 411 aaPredicted RBP18.74■□□□□ 0.59
RXRB-201ENST00000374680 HYOU1Q9Y4L1 999 aa18.74■□□□□ 0.59
RXRB-201ENST00000374680 ANO9A1A5B4 782 aa18.74■□□□□ 0.59
RXRB-201ENST00000374680 KNOP1Q1ED39 458 aaKnown RBP18.74■□□□□ 0.59
RXRB-201ENST00000374680 ASTE1Q2TB18 679 aaPredicted RBP18.74■□□□□ 0.59
RXRB-201ENST00000374680 KLHL7Q8IXQ5 586 aa18.74■□□□□ 0.59
RXRB-201ENST00000374680 MKL1Q969V6 931 aa18.74■□□□□ 0.59
RXRB-201ENST00000374680 HPCAL4Q9UM19 191 aa18.74■□□□□ 0.59
RXRB-201ENST00000374680 RABGAP1Q9Y3P9 1069 aa18.74■□□□□ 0.59
RXRB-201ENST00000374680 SERPING1P05155 500 aa18.73■□□□□ 0.59
RXRB-201ENST00000374680 PDGFDQ9GZP0 370 aaPredicted RBP18.73■□□□□ 0.59
RXRB-201ENST00000374680 EHD4Q9H223 541 aa18.73■□□□□ 0.59
RXRB-201ENST00000374680 LY75O60449 1722 aa18.73■□□□□ 0.59
RXRB-201ENST00000374680 SYF2O95926 243 aaKnown RBP18.73■□□□□ 0.59
RXRB-201ENST00000374680 CYP2J2P51589 502 aa18.73■□□□□ 0.59
RXRB-201ENST00000374680 CCDC70Q6NSX1 233 aa18.73■□□□□ 0.59
RXRB-201ENST00000374680 UBR3Q6ZT12 1888 aa18.73■□□□□ 0.59
RXRB-201ENST00000374680 MYH4Q9Y623 1939 aa18.73■□□□□ 0.59
RXRB-201ENST00000374680 YDJCA8MPS7 323 aa18.73■□□□□ 0.59
RXRB-201ENST00000374680 XRCC5P13010 732 aaKnown RBP18.73■□□□□ 0.59
RXRB-201ENST00000374680 RPA1P27694 616 aa18.73■□□□□ 0.59
RXRB-201ENST00000374680 GUCY2FP51841 1108 aa18.73■□□□□ 0.59
RXRB-201ENST00000374680 DGKZQ13574 1117 aa18.73■□□□□ 0.59
RXRB-201ENST00000374680 EXOC3L4Q17RC7 722 aa18.73■□□□□ 0.59
RXRB-201ENST00000374680 WDR18Q9BV38 432 aa18.73■□□□□ 0.59
RXRB-201ENST00000374680 HOMER2Q9NSB8 354 aa18.73■□□□□ 0.59
RXRB-201ENST00000374680 TATDN1Q6P1N9 297 aa18.72■□□□□ 0.59
RXRB-201ENST00000374680 ZNF571Q7Z3V5 609 aaPredicted RBP18.72■□□□□ 0.59
RXRB-201ENST00000374680 SYT2Q8N9I0 419 aaPredicted RBP18.72■□□□□ 0.59
RXRB-201ENST00000374680 PCNTO95613 3336 aa18.72■□□□□ 0.59
RXRB-201ENST00000374680 FAM13AO94988 1023 aa18.72■□□□□ 0.59
RXRB-201ENST00000374680 MAP9Q49MG5 647 aa18.72■□□□□ 0.59
RXRB-201ENST00000374680 HYIQ5T013 277 aa18.72■□□□□ 0.59
RXRB-201ENST00000374680 LRCH2Q5VUJ6 765 aa18.72■□□□□ 0.59
RXRB-201ENST00000374680 CPXCR1Q8N123 301 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms