RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 KLHL40Q2TBA0 621 aa19.65■□□□□ 0.74
PFDN6-201ENST00000374606 TRPV1Q8NER1 839 aa19.65■□□□□ 0.74
PFDN6-201ENST00000374606 KATNBL1Q9H079 304 aa19.65■□□□□ 0.74
PFDN6-201ENST00000374606 SEMA6BQ9H3T3 888 aa19.65■□□□□ 0.74
PFDN6-201ENST00000374606 JPH1Q9HDC5 661 aaPredicted RBP19.65■□□□□ 0.74
PFDN6-201ENST00000374606 CCDC39Q9UFE4 941 aa19.65■□□□□ 0.74
PFDN6-201ENST00000374606 KDM3AQ9Y4C1 1321 aa19.65■□□□□ 0.74
PFDN6-201ENST00000374606 KBTBD13C9JR72 458 aa19.64■□□□□ 0.73
PFDN6-201ENST00000374606 TRAK2O60296 914 aa19.64■□□□□ 0.73
PFDN6-201ENST00000374606 TXNP10599 105 aaKnown RBP19.64■□□□□ 0.73
PFDN6-201ENST00000374606 JAK3P52333 1124 aa19.64■□□□□ 0.73
PFDN6-201ENST00000374606 C9orf50Q5SZB4 431 aa19.64■□□□□ 0.73
PFDN6-201ENST00000374606 GJC2Q5T442 439 aaPredicted RBP19.64■□□□□ 0.73
PFDN6-201ENST00000374606 TAPT1Q6NXT6 567 aa19.64■□□□□ 0.73
PFDN6-201ENST00000374606 B3GNT9Q6UX72 402 aa19.64■□□□□ 0.73
PFDN6-201ENST00000374606 MIER3Q7Z3K6 550 aa19.64■□□□□ 0.73
PFDN6-201ENST00000374606 CALML4Q96GE6 196 aa19.64■□□□□ 0.73
PFDN6-201ENST00000374606 CDK5RAP3Q96JB5 506 aa19.64■□□□□ 0.73
PFDN6-201ENST00000374606 PYM1Q9BRP8 204 aaKnown RBP19.64■□□□□ 0.73
PFDN6-201ENST00000374606 PRDM5Q9NQX1 630 aaPredicted RBP19.64■□□□□ 0.73
PFDN6-201ENST00000374606 PDGFCQ9NRA1 345 aa19.64■□□□□ 0.73
PFDN6-201ENST00000374606 SLC9A2Q9UBY0 812 aa19.64■□□□□ 0.73
PFDN6-201ENST00000374606 DDX41Q9UJV9 622 aaKnown RBP19.64■□□□□ 0.73
PFDN6-201ENST00000374606 RBM47A0AV96 593 aaKnown RBP19.63■□□□□ 0.73
PFDN6-201ENST00000374606 WDR64B1ANS9 1081 aa19.63■□□□□ 0.73
PFDN6-201ENST00000374606 SLC26A4O43511 780 aa19.63■□□□□ 0.73
PFDN6-201ENST00000374606 SORBS3O60504 671 aa19.63■□□□□ 0.73
PFDN6-201ENST00000374606 KINO60870 393 aaKnown RBP19.63■□□□□ 0.73
PFDN6-201ENST00000374606 NR1I2O75469 434 aa19.63■□□□□ 0.73
PFDN6-201ENST00000374606 ARIH2O95376 493 aa19.63■□□□□ 0.73
PFDN6-201ENST00000374606 GGPS1O95749 300 aa19.63■□□□□ 0.73
PFDN6-201ENST00000374606 SFNP31947 248 aa19.63■□□□□ 0.73
PFDN6-201ENST00000374606 CCT6AP40227 531 aaKnown RBP19.63■□□□□ 0.73
PFDN6-201ENST00000374606 SMAD3P84022 425 aaKnown RBP19.63■□□□□ 0.73
PFDN6-201ENST00000374606 SP2Q02086 613 aa19.63■□□□□ 0.73
PFDN6-201ENST00000374606 KARSQ15046 597 aaKnown RBP19.63■□□□□ 0.73
PFDN6-201ENST00000374606 ZRSR1Q15695 479 aaKnown RBP19.63■□□□□ 0.73
PFDN6-201ENST00000374606 LY6KQ17RY6 165 aa19.63■□□□□ 0.73
PFDN6-201ENST00000374606 ZNF746Q6NUN9 644 aaPredicted RBP19.63■□□□□ 0.73
PFDN6-201ENST00000374606 CCDC62Q6P9F0 684 aa19.63■□□□□ 0.73
PFDN6-201ENST00000374606 SLC39A5Q6ZMH5 540 aa19.63■□□□□ 0.73
PFDN6-201ENST00000374606 FMR1NBQ8N0W7 255 aaPredicted RBP19.63■□□□□ 0.73
PFDN6-201ENST00000374606 PDILTQ8N807 584 aa19.63■□□□□ 0.73
PFDN6-201ENST00000374606 DDX19AQ9NUU7 478 aaKnown RBP19.63■□□□□ 0.73
PFDN6-201ENST00000374606 DACT1Q9NYF0 836 aa19.63■□□□□ 0.73
PFDN6-201ENST00000374606 SAMM50Q9Y512 469 aa19.63■□□□□ 0.73
PFDN6-201ENST00000374606 EML1O00423 815 aa19.62■□□□□ 0.73
PFDN6-201ENST00000374606 POLR2DO15514 142 aaKnown RBP19.62■□□□□ 0.73
PFDN6-201ENST00000374606 CCNE2O96020 404 aa19.62■□□□□ 0.73
PFDN6-201ENST00000374606 IGHA2P01877 340 aa19.62■□□□□ 0.73
PFDN6-201ENST00000374606 ADCYAP1R1P41586 468 aa19.62■□□□□ 0.73
PFDN6-201ENST00000374606 SP4Q02446 784 aa19.62■□□□□ 0.73
PFDN6-201ENST00000374606 METTL7BQ6UX53 244 aa19.62■□□□□ 0.73
PFDN6-201ENST00000374606 CYFIP1Q7L576 1253 aa19.62■□□□□ 0.73
PFDN6-201ENST00000374606 SMAP1Q8IYB5 467 aaPredicted RBP19.62■□□□□ 0.73
PFDN6-201ENST00000374606 ENGASEQ8NFI3 743 aa19.62■□□□□ 0.73
PFDN6-201ENST00000374606 RDM1Q8NG50 284 aa19.62■□□□□ 0.73
PFDN6-201ENST00000374606 NEK9Q8TD19 979 aa19.62■□□□□ 0.73
PFDN6-201ENST00000374606 MYLIPQ8WY64 445 aa19.62■□□□□ 0.73
PFDN6-201ENST00000374606 MMTAG2Q9BU76 263 aaKnown RBP19.62■□□□□ 0.73
PFDN6-201ENST00000374606 DISC1Q9NRI5 854 aa19.62■□□□□ 0.73
PFDN6-201ENST00000374606 NRBP1Q9UHY1 535 aa19.62■□□□□ 0.73
PFDN6-201ENST00000374606 TTC28Q96AY4 2481 aa19.62■□□□□ 0.73
PFDN6-201ENST00000374606 A0A087X0B3 334 aa19.61■□□□□ 0.73
PFDN6-201ENST00000374606 ZNF202O95125 648 aa19.61■□□□□ 0.73
PFDN6-201ENST00000374606 STAT6P42226 847 aa19.61■□□□□ 0.73
PFDN6-201ENST00000374606 SNW1Q13573 536 aaKnown RBP19.61■□□□□ 0.73
PFDN6-201ENST00000374606 SNX17Q15036 470 aa19.61■□□□□ 0.73
PFDN6-201ENST00000374606 EPHA7Q15375 998 aa19.61■□□□□ 0.73
PFDN6-201ENST00000374606 TRIM60Q495X7 471 aa19.61■□□□□ 0.73
PFDN6-201ENST00000374606 BADQ92934 168 aa19.61■□□□□ 0.73
PFDN6-201ENST00000374606 SYAP1Q96A49 352 aaPredicted RBP19.61■□□□□ 0.73
PFDN6-201ENST00000374606 DHX58Q96C10 678 aa19.61■□□□□ 0.73
PFDN6-201ENST00000374606 EIF2AK1Q9BQI3 630 aaKnown RBP19.61■□□□□ 0.73
PFDN6-201ENST00000374606 PANK2Q9BZ23 570 aa19.61■□□□□ 0.73
PFDN6-201ENST00000374606 MLXIPQ9HAP2 919 aa19.61■□□□□ 0.73
PFDN6-201ENST00000374606 PRDM6Q9NQX0 595 aa19.61■□□□□ 0.73
PFDN6-201ENST00000374606 PDLIM7Q9NR12 457 aa19.61■□□□□ 0.73
PFDN6-201ENST00000374606 SPTBN5Q9NRC6 3674 aaKnown RBP19.61■□□□□ 0.73
PFDN6-201ENST00000374606 EYSQ5T1H1 3165 aa19.61■□□□□ 0.73
PFDN6-201ENST00000374606 POTEB3A0JP26 581 aa19.6■□□□□ 0.73
PFDN6-201ENST00000374606 SEPT4O43236 478 aa19.6■□□□□ 0.73
PFDN6-201ENST00000374606 GH1P01241 217 aa19.6■□□□□ 0.73
PFDN6-201ENST00000374606 ZNF865P0CJ78 1059 aaPredicted RBP19.6■□□□□ 0.73
PFDN6-201ENST00000374606 PLCG1P19174 1290 aa19.6■□□□□ 0.73
PFDN6-201ENST00000374606 ACTR2P61160 394 aa19.6■□□□□ 0.73
PFDN6-201ENST00000374606 CYP4A11Q02928 519 aa19.6■□□□□ 0.73
PFDN6-201ENST00000374606 GRB10Q13322 594 aa19.6■□□□□ 0.73
PFDN6-201ENST00000374606 CCDC144BQ3MJ40 725 aa19.6■□□□□ 0.73
PFDN6-201ENST00000374606 CELF3Q5SZQ8 465 aaKnown RBP19.6■□□□□ 0.73
PFDN6-201ENST00000374606 RRAGBQ5VZM2 374 aa19.6■□□□□ 0.73
PFDN6-201ENST00000374606 IQSEC1Q6DN90 963 aa19.6■□□□□ 0.73
PFDN6-201ENST00000374606 CAVIN1Q6NZI2 390 aaKnown RBP19.6■□□□□ 0.73
PFDN6-201ENST00000374606 POTEBQ6S5H4 581 aa19.6■□□□□ 0.73
PFDN6-201ENST00000374606 DHX37Q8IY37 1157 aaKnown RBP19.6■□□□□ 0.73
PFDN6-201ENST00000374606 IQUBQ8NA54 791 aa19.6■□□□□ 0.73
PFDN6-201ENST00000374606 NT5C3AQ9H0P0 336 aa19.6■□□□□ 0.73
PFDN6-201ENST00000374606 TTYH1Q9H313 450 aaPredicted RBP19.6■□□□□ 0.73
PFDN6-201ENST00000374606 USP25Q9UHP3 1055 aa19.6■□□□□ 0.73
PFDN6-201ENST00000374606 NOP56O00567 594 aaKnown RBP19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms