RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 KIAA1024Q9UPX6 916 aa15.37■□□□□ 0.05
HMGCL-203ENST00000374490 PCDHA2Q9Y5H9 948 aa15.37■□□□□ 0.05
HMGCL-203ENST00000374490 EPHB6O15197 1021 aa15.36■□□□□ 0.05
HMGCL-203ENST00000374490 ENTPD3O75355 529 aa15.36■□□□□ 0.05
HMGCL-203ENST00000374490 TFRCP02786 760 aaKnown RBP15.36■□□□□ 0.05
HMGCL-203ENST00000374490 KRT18P05783 430 aaKnown RBP15.36■□□□□ 0.05
HMGCL-203ENST00000374490 ECE1P42892 770 aa15.36■□□□□ 0.05
HMGCL-203ENST00000374490 AARSP49588 968 aaKnown RBP eCLIP15.36■□□□□ 0.05
HMGCL-203ENST00000374490 LBX1P52954 281 aa15.36■□□□□ 0.05
HMGCL-203ENST00000374490 LRRC41Q15345 812 aa15.36■□□□□ 0.05
HMGCL-203ENST00000374490 ASTE1Q2TB18 679 aaPredicted RBP15.36■□□□□ 0.05
HMGCL-203ENST00000374490 HERC4Q5GLZ8 1057 aaPredicted RBP15.36■□□□□ 0.05
HMGCL-203ENST00000374490 CIAPIN1Q6FI81 312 aa15.36■□□□□ 0.05
HMGCL-203ENST00000374490 TRIM59Q8IWR1 403 aa15.36■□□□□ 0.05
HMGCL-203ENST00000374490 CAPZA3Q96KX2 299 aa15.36■□□□□ 0.05
HMGCL-203ENST00000374490 FAM20AQ96MK3 541 aa15.36■□□□□ 0.05
HMGCL-203ENST00000374490 NOX5Q96PH1 765 aa15.36■□□□□ 0.05
HMGCL-203ENST00000374490 RNF14Q9UBS8 474 aa15.36■□□□□ 0.05
HMGCL-203ENST00000374490 FAM198AQ9UFP1 575 aa15.36■□□□□ 0.05
HMGCL-203ENST00000374490 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.36■□□□□ 0.05
HMGCL-203ENST00000374490 COL2A1P02458 1487 aaPredicted RBP15.36■□□□□ 0.05
HMGCL-203ENST00000374490 SPDYE2BA6NHP3 402 aa15.35■□□□□ 0.05
HMGCL-203ENST00000374490 CETN3O15182 167 aa15.35■□□□□ 0.05
HMGCL-203ENST00000374490 PLEKP08567 350 aaPredicted RBP15.35■□□□□ 0.05
HMGCL-203ENST00000374490 SPDYE6P0CI01 402 aa15.35■□□□□ 0.05
HMGCL-203ENST00000374490 ARHGAP4P98171 946 aa15.35■□□□□ 0.05
HMGCL-203ENST00000374490 ICA1Q05084 483 aa15.35■□□□□ 0.05
HMGCL-203ENST00000374490 FBXO11Q86XK2 927 aa15.35■□□□□ 0.05
HMGCL-203ENST00000374490 CRYGNQ8WXF5 182 aa15.35■□□□□ 0.05
HMGCL-203ENST00000374490 PRMT6Q96LA8 375 aaPredicted RBP15.35■□□□□ 0.05
HMGCL-203ENST00000374490 GMLQ99445 158 aa15.35■□□□□ 0.05
HMGCL-203ENST00000374490 LSM14BQ9BX40 385 aaKnown RBP15.35■□□□□ 0.05
HMGCL-203ENST00000374490 DNAJC18Q9H819 358 aa15.35■□□□□ 0.05
HMGCL-203ENST00000374490 ADARB2Q9NS39 739 aaKnown RBP15.35■□□□□ 0.05
HMGCL-203ENST00000374490 EMILIN3Q9NT22 766 aa15.35■□□□□ 0.05
HMGCL-203ENST00000374490 TFR2Q9UP52 801 aa15.35■□□□□ 0.05
HMGCL-203ENST00000374490 SIPA1L1O43166 1804 aa15.35■□□□□ 0.05
HMGCL-203ENST00000374490 POTEB3A0JP26 581 aa15.35■□□□□ 0.05
HMGCL-203ENST00000374490 E9PMD0 336 aa15.35■□□□□ 0.05
HMGCL-203ENST00000374490 SRGAP2O75044 1071 aa15.35■□□□□ 0.05
HMGCL-203ENST00000374490 CIITAP33076 1130 aa15.35■□□□□ 0.05
HMGCL-203ENST00000374490 PAFAH1B1P43034 410 aa15.35■□□□□ 0.05
HMGCL-203ENST00000374490 SLC12A3P55017 1021 aa15.35■□□□□ 0.05
HMGCL-203ENST00000374490 CXCL9Q07325 125 aa15.35■□□□□ 0.05
HMGCL-203ENST00000374490 KCNMA1Q12791 1236 aa15.35■□□□□ 0.05
HMGCL-203ENST00000374490 TNIP1Q15025 636 aa15.35■□□□□ 0.05
HMGCL-203ENST00000374490 POTEBQ6S5H4 581 aa15.35■□□□□ 0.05
HMGCL-203ENST00000374490 KRT26Q7Z3Y9 468 aa15.35■□□□□ 0.05
HMGCL-203ENST00000374490 ZFPM1Q8IX07 1006 aa15.35■□□□□ 0.05
HMGCL-203ENST00000374490 ETNPPLQ8TBG4 499 aa15.35■□□□□ 0.05
HMGCL-203ENST00000374490 BEGAINQ9BUH8 593 aa15.35■□□□□ 0.05
HMGCL-203ENST00000374490 KCTD10Q9H3F6 313 aa15.35■□□□□ 0.05
HMGCL-203ENST00000374490 GPRC5DQ9NZD1 345 aa15.35■□□□□ 0.05
HMGCL-203ENST00000374490 ADAM21Q9UKJ8 722 aa15.35■□□□□ 0.05
HMGCL-203ENST00000374490 ZBTB12Q9Y330 459 aaPredicted RBP15.35■□□□□ 0.05
HMGCL-203ENST00000374490 MYH4Q9Y623 1939 aa15.35■□□□□ 0.05
HMGCL-203ENST00000374490 ERICH4A6NGS2 130 aa15.34■□□□□ 0.05
HMGCL-203ENST00000374490 SPDYE3A6NKU9 549 aa15.34■□□□□ 0.05
HMGCL-203ENST00000374490 USP17L15C9J2P7 530 aa15.34■□□□□ 0.05
HMGCL-203ENST00000374490 USP17L13C9JLJ4 530 aa15.34■□□□□ 0.05
HMGCL-203ENST00000374490 USP17L11C9JVI0 530 aa15.34■□□□□ 0.05
HMGCL-203ENST00000374490 USP17L18D6R9N7 530 aa15.34■□□□□ 0.05
HMGCL-203ENST00000374490 USP17L22D6RA61 530 aa15.34■□□□□ 0.05
HMGCL-203ENST00000374490 USP17L17D6RBQ6 530 aa15.34■□□□□ 0.05
HMGCL-203ENST00000374490 USP17L19D6RCP7 530 aa15.34■□□□□ 0.05
HMGCL-203ENST00000374490 USP17L20D6RJB6 530 aa15.34■□□□□ 0.05
HMGCL-203ENST00000374490 MOCS3O95396 460 aa15.34■□□□□ 0.05
HMGCL-203ENST00000374490 ANXA13P27216 316 aa15.34■□□□□ 0.05
HMGCL-203ENST00000374490 RPA1P27694 616 aa15.34■□□□□ 0.05
HMGCL-203ENST00000374490 SREBF1P36956 1147 aa15.34■□□□□ 0.05
HMGCL-203ENST00000374490 USP17L24Q0WX57 530 aa15.34■□□□□ 0.05
HMGCL-203ENST00000374490 TDRD12Q587J7 1177 aaKnown RBP15.34■□□□□ 0.05
HMGCL-203ENST00000374490 FAM83BQ5T0W9 1011 aa15.34■□□□□ 0.05
HMGCL-203ENST00000374490 SYDE2Q5VT97 1194 aa15.34■□□□□ 0.05
HMGCL-203ENST00000374490 USP17L6PQ6QN14 398 aa15.34■□□□□ 0.05
HMGCL-203ENST00000374490 FRMD5Q7Z6J6 570 aa15.34■□□□□ 0.05
HMGCL-203ENST00000374490 SYT2Q8N9I0 419 aaPredicted RBP15.34■□□□□ 0.05
HMGCL-203ENST00000374490 SCFD1Q8WVM8 642 aa15.34■□□□□ 0.05
HMGCL-203ENST00000374490 ZCCHC17Q9NP64 241 aaKnown RBP15.34■□□□□ 0.05
HMGCL-203ENST00000374490 DNM3Q9UQ16 869 aa15.34■□□□□ 0.05
HMGCL-203ENST00000374490 TRAF3IP3Q9Y228 551 aa15.34■□□□□ 0.05
HMGCL-203ENST00000374490 CAPN6Q9Y6Q1 641 aa15.34■□□□□ 0.05
HMGCL-203ENST00000374490 DUSP10Q9Y6W6 482 aa15.34■□□□□ 0.05
HMGCL-203ENST00000374490 ATRNL1Q5VV63 1379 aa15.34■□□□□ 0.05
HMGCL-203ENST00000374490 ATP8B3O60423 1300 aa15.33■□□□□ 0.05
HMGCL-203ENST00000374490 A0A0U1RQG5 324 aaPredicted RBP15.33■□□□□ 0.04
HMGCL-203ENST00000374490 DDTLA6NHG4 134 aaPredicted RBP15.33■□□□□ 0.04
HMGCL-203ENST00000374490 MEIS2O14770 477 aa15.33■□□□□ 0.04
HMGCL-203ENST00000374490 NKRFO15226 690 aaKnown RBP eCLIP15.33■□□□□ 0.04
HMGCL-203ENST00000374490 CALUO43852 315 aaPredicted RBP15.33■□□□□ 0.04
HMGCL-203ENST00000374490 MED24O75448 989 aa15.33■□□□□ 0.04
HMGCL-203ENST00000374490 TNNT3P45378 269 aaPredicted RBP15.33■□□□□ 0.04
HMGCL-203ENST00000374490 MUM1L1Q5H9M0 696 aa15.33■□□□□ 0.04
HMGCL-203ENST00000374490 C10orf76Q5T2E6 689 aa15.33■□□□□ 0.04
HMGCL-203ENST00000374490 CCDC181Q5TID7 509 aa15.33■□□□□ 0.04
HMGCL-203ENST00000374490 HGSNATQ68CP4 663 aa15.33■□□□□ 0.04
HMGCL-203ENST00000374490 BTNL9Q6UXG8 535 aa15.33■□□□□ 0.04
HMGCL-203ENST00000374490 CCNI2Q6ZMN8 369 aaPredicted RBP15.33■□□□□ 0.04
HMGCL-203ENST00000374490 CREG2Q8IUH2 290 aa15.33■□□□□ 0.04
HMGCL-203ENST00000374490 GOLGA6L1Q8N7Z2 621 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms