RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 TANC1Q9C0D5 1861 aa20.86■□□□□ 0.93
CDX4-201ENST00000373514 IGSF9BQ9UPX0 1349 aa20.86■□□□□ 0.93
CDX4-201ENST00000373514 ARVCFO00192 962 aa20.86■□□□□ 0.93
CDX4-201ENST00000373514 PQBP1O60828 265 aaKnown RBP20.86■□□□□ 0.93
CDX4-201ENST00000373514 PSAPP07602 524 aa20.86■□□□□ 0.93
CDX4-201ENST00000373514 MCM4P33991 863 aa20.86■□□□□ 0.93
CDX4-201ENST00000373514 SF3A1Q15459 793 aaKnown RBP20.86■□□□□ 0.93
CDX4-201ENST00000373514 SWSAP1Q6NVH7 229 aa20.86■□□□□ 0.93
CDX4-201ENST00000373514 SLC43A3Q8NBI5 491 aa20.86■□□□□ 0.93
CDX4-201ENST00000373514 KATNAL1Q9BW62 490 aa20.86■□□□□ 0.93
CDX4-201ENST00000373514 ZSCAN16Q9H4T2 348 aaPredicted RBP20.86■□□□□ 0.93
CDX4-201ENST00000373514 ZNF302Q9NR11 478 aa20.86■□□□□ 0.93
CDX4-201ENST00000373514 GABBR1Q9UBS5 961 aa20.86■□□□□ 0.93
CDX4-201ENST00000373514 SIP14410 1827 aa20.85■□□□□ 0.93
CDX4-201ENST00000373514 STAT5BP51692 787 aa20.85■□□□□ 0.93
CDX4-201ENST00000373514 JAK3P52333 1124 aa20.85■□□□□ 0.93
CDX4-201ENST00000373514 CEBPZQ03701 1054 aaKnown RBP20.85■□□□□ 0.93
CDX4-201ENST00000373514 HIC1Q14526 733 aa20.85■□□□□ 0.93
CDX4-201ENST00000373514 TRMT1LQ7Z2T5 733 aaKnown RBP20.85■□□□□ 0.93
CDX4-201ENST00000373514 BANK1Q8NDB2 785 aa20.85■□□□□ 0.93
CDX4-201ENST00000373514 RNPEPQ9H4A4 650 aa20.85■□□□□ 0.93
CDX4-201ENST00000373514 SMARCAD1Q9H4L7 1026 aa20.85■□□□□ 0.93
CDX4-201ENST00000373514 AZI2Q9H6S1 392 aa20.85■□□□□ 0.93
CDX4-201ENST00000373514 HDAC6Q9UBN7 1215 aa20.85■□□□□ 0.93
CDX4-201ENST00000373514 ZNF215Q9UL58 517 aaPredicted RBP20.85■□□□□ 0.93
CDX4-201ENST00000373514 PCDHA12Q9UN75 941 aa20.85■□□□□ 0.93
CDX4-201ENST00000373514 SFNP31947 248 aa20.84■□□□□ 0.93
CDX4-201ENST00000373514 TECP42680 631 aa20.84■□□□□ 0.93
CDX4-201ENST00000373514 CDK7P50613 346 aa20.84■□□□□ 0.93
CDX4-201ENST00000373514 ATP2C1P98194 919 aaPredicted RBP20.84■□□□□ 0.93
CDX4-201ENST00000373514 IL17AQ16552 155 aa20.84■□□□□ 0.93
CDX4-201ENST00000373514 C7orf61Q8IZ16 206 aa20.84■□□□□ 0.93
CDX4-201ENST00000373514 AFAP1L1Q8TED9 768 aa20.84■□□□□ 0.93
CDX4-201ENST00000373514 CHAMP1Q96JM3 812 aa20.84■□□□□ 0.93
CDX4-201ENST00000373514 USP28Q96RU2 1077 aa20.84■□□□□ 0.93
CDX4-201ENST00000373514 HTATIP2Q9BUP3 242 aa20.84■□□□□ 0.93
CDX4-201ENST00000373514 EVPLQ92817 2033 aa20.84■□□□□ 0.93
CDX4-201ENST00000373514 B4GALT4O60513 344 aa20.83■□□□□ 0.93
CDX4-201ENST00000373514 SMIM10L2AP0DMW4 78 aa20.83■□□□□ 0.93
CDX4-201ENST00000373514 SMIM10L2BP0DMW5 78 aa20.83■□□□□ 0.93
CDX4-201ENST00000373514 ATP4AP20648 1035 aa20.83■□□□□ 0.93
CDX4-201ENST00000373514 TLE2Q04725 743 aa20.83■□□□□ 0.93
CDX4-201ENST00000373514 PLCB4Q15147 1175 aa20.83■□□□□ 0.93
CDX4-201ENST00000373514 C1orf53Q5VUE5 145 aa20.83■□□□□ 0.93
CDX4-201ENST00000373514 FAM160B1Q5W0V3 765 aa20.83■□□□□ 0.93
CDX4-201ENST00000373514 NFRKBQ6P4R8 1299 aa20.83■□□□□ 0.93
CDX4-201ENST00000373514 FAM126BQ8IXS8 530 aa20.83■□□□□ 0.93
CDX4-201ENST00000373514 TRMT13Q9NUP7 481 aaKnown RBP20.83■□□□□ 0.93
CDX4-201ENST00000373514 ERAP1Q9NZ08 941 aa20.83■□□□□ 0.93
CDX4-201ENST00000373514 ATP6V1DQ9Y5K8 247 aa20.83■□□□□ 0.93
CDX4-201ENST00000373514 ZNF200P98182 395 aaPredicted RBP20.83■□□□□ 0.92
CDX4-201ENST00000373514 GDF6Q6KF10 455 aaPredicted RBP20.83■□□□□ 0.92
CDX4-201ENST00000373514 PDXDC2PQ6P474 469 aa20.83■□□□□ 0.92
CDX4-201ENST00000373514 C7orf31Q8N865 590 aa20.83■□□□□ 0.92
CDX4-201ENST00000373514 RDM1Q8NG50 284 aa20.83■□□□□ 0.92
CDX4-201ENST00000373514 TRPV6Q9H1D0 765 aa20.83■□□□□ 0.92
CDX4-201ENST00000373514 WRAP73Q9P2S5 460 aaPredicted RBP20.83■□□□□ 0.92
CDX4-201ENST00000373514 GTF2IRD1Q9UHL9 959 aa20.83■□□□□ 0.92
CDX4-201ENST00000373514 MAFBQ9Y5Q3 323 aaPredicted RBP20.83■□□□□ 0.92
CDX4-201ENST00000373514 ZNF862O60290 1169 aa20.82■□□□□ 0.92
CDX4-201ENST00000373514 PRKCEQ02156 737 aa20.82■□□□□ 0.92
CDX4-201ENST00000373514 CYP4A11Q02928 519 aa20.82■□□□□ 0.92
CDX4-201ENST00000373514 PTPAQ15257 358 aa20.82■□□□□ 0.92
CDX4-201ENST00000373514 PLPPR4Q7Z2D5 763 aa20.82■□□□□ 0.92
CDX4-201ENST00000373514 DPF3Q92784 378 aa20.82■□□□□ 0.92
CDX4-201ENST00000373514 DYDC2Q96IM9 177 aa20.82■□□□□ 0.92
CDX4-201ENST00000373514 CTAGE1Q96RT6 745 aa20.82■□□□□ 0.92
CDX4-201ENST00000373514 TRPC6Q9Y210 931 aa20.82■□□□□ 0.92
CDX4-201ENST00000373514 LOXHD1Q8IVV2 1947 aa20.82■□□□□ 0.92
CDX4-201ENST00000373514 SCN5AQ14524 2016 aa20.81■□□□□ 0.92
CDX4-201ENST00000373514 TMEM150BA6NC51 233 aa20.81■□□□□ 0.92
CDX4-201ENST00000373514 PP2D1A8MPX8 630 aa20.81■□□□□ 0.92
CDX4-201ENST00000373514 RBAK-RBAKDNI3L0D1 243 aa20.81■□□□□ 0.92
CDX4-201ENST00000373514 CTTNQ14247 550 aaKnown RBP20.81■□□□□ 0.92
CDX4-201ENST00000373514 ANKRD33Q7Z3H0 272 aa20.81■□□□□ 0.92
CDX4-201ENST00000373514 SH3RF1Q7Z6J0 888 aa20.81■□□□□ 0.92
CDX4-201ENST00000373514 LMBR1Q8WVP7 490 aa20.81■□□□□ 0.92
CDX4-201ENST00000373514 TRAPPC12Q8WVT3 735 aa20.81■□□□□ 0.92
CDX4-201ENST00000373514 ZBTB10Q96DT7 871 aa20.81■□□□□ 0.92
CDX4-201ENST00000373514 PDLIM7Q9NR12 457 aa20.81■□□□□ 0.92
CDX4-201ENST00000373514 RGL1Q9NZL6 768 aa20.81■□□□□ 0.92
CDX4-201ENST00000373514 MROH7Q68CQ1 1323 aa20.8■□□□□ 0.92
CDX4-201ENST00000373514 POTEB3A0JP26 581 aa20.8■□□□□ 0.92
CDX4-201ENST00000373514 LAD1O00515 517 aa20.8■□□□□ 0.92
CDX4-201ENST00000373514 EVI5O60447 810 aa20.8■□□□□ 0.92
CDX4-201ENST00000373514 PRPHP41219 470 aa20.8■□□□□ 0.92
CDX4-201ENST00000373514 FXR2P51116 673 aaKnown RBP eCLIP20.8■□□□□ 0.92
CDX4-201ENST00000373514 GRIN1Q05586 938 aa20.8■□□□□ 0.92
CDX4-201ENST00000373514 FAAP100Q0VG06 881 aa20.8■□□□□ 0.92
CDX4-201ENST00000373514 EPHA7Q15375 998 aa20.8■□□□□ 0.92
CDX4-201ENST00000373514 TMEM266Q2M3C6 531 aa20.8■□□□□ 0.92
CDX4-201ENST00000373514 POTEBQ6S5H4 581 aa20.8■□□□□ 0.92
CDX4-201ENST00000373514 SESTD1Q86VW0 696 aa20.8■□□□□ 0.92
CDX4-201ENST00000373514 CKAP2LQ8IYA6 745 aa20.8■□□□□ 0.92
CDX4-201ENST00000373514 EIF2AK1Q9BQI3 630 aaKnown RBP20.8■□□□□ 0.92
CDX4-201ENST00000373514 LXNQ9BS40 222 aa20.8■□□□□ 0.92
CDX4-201ENST00000373514 SETD4Q9NVD3 440 aa20.8■□□□□ 0.92
CDX4-201ENST00000373514 TFIP11Q9UBB9 837 aaKnown RBP20.8■□□□□ 0.92
CDX4-201ENST00000373514 VWA3AA6NCI4 1184 aa20.79■□□□□ 0.92
CDX4-201ENST00000373514 DDX11L8A8MPP1 907 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms