RNA–Protein interactions for RNA: ENST00000373433.8

RPRD1B-201, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1B, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-201ENST00000373433 HAUS3Q68CZ6 603 aa12.26□□□□□ -0.45
RPRD1B-201ENST00000373433 NAIF1Q69YI7 327 aaPredicted RBP12.26□□□□□ -0.45
RPRD1B-201ENST00000373433 TBC1D31Q96DN5 1066 aa12.26□□□□□ -0.45
RPRD1B-201ENST00000373433 DDX20Q9UHI6 824 aaKnown RBP12.26□□□□□ -0.45
RPRD1B-201ENST00000373433 FAM153AQ9UHL3 310 aa12.26□□□□□ -0.45
RPRD1B-201ENST00000373433 ANKRD36CQ5JPF3 1778 aa12.26□□□□□ -0.45
RPRD1B-201ENST00000373433 WNT7AO00755 349 aa12.26□□□□□ -0.45
RPRD1B-201ENST00000373433 PLEKP08567 350 aaPredicted RBP12.26□□□□□ -0.45
RPRD1B-201ENST00000373433 CYB5D1Q6P9G0 228 aa12.26□□□□□ -0.45
RPRD1B-201ENST00000373433 KDM7AQ6ZMT4 941 aa12.26□□□□□ -0.45
RPRD1B-201ENST00000373433 CCDC84Q86UT8 332 aaPredicted RBP12.26□□□□□ -0.45
RPRD1B-201ENST00000373433 APOBEC3FQ8IUX4 373 aaKnown RBP12.26□□□□□ -0.45
RPRD1B-201ENST00000373433 CALML4Q96GE6 196 aa12.26□□□□□ -0.45
RPRD1B-201ENST00000373433 ALS2CR12Q96Q35 445 aa12.26□□□□□ -0.45
RPRD1B-201ENST00000373433 RBM12Q9NTZ6 932 aaKnown RBP12.26□□□□□ -0.45
RPRD1B-201ENST00000373433 HACL1Q9UJ83 578 aa12.26□□□□□ -0.45
RPRD1B-201ENST00000373433 ZNF233A6NK53 670 aa12.25□□□□□ -0.45
RPRD1B-201ENST00000373433 MDH1P40925 334 aaKnown RBP12.25□□□□□ -0.45
RPRD1B-201ENST00000373433 STAT2P52630 851 aa12.25□□□□□ -0.45
RPRD1B-201ENST00000373433 PTGDRQ13258 359 aa12.25□□□□□ -0.45
RPRD1B-201ENST00000373433 MS4A14Q96JA4 679 aa12.25□□□□□ -0.45
RPRD1B-201ENST00000373433 AMNQ9BXJ7 453 aa12.25□□□□□ -0.45
RPRD1B-201ENST00000373433 TRIM6Q9C030 488 aaPredicted RBP12.25□□□□□ -0.45
RPRD1B-201ENST00000373433 HYOU1Q9Y4L1 999 aa12.25□□□□□ -0.45
RPRD1B-201ENST00000373433 BRWD3Q6RI45 1802 aa12.25□□□□□ -0.45
RPRD1B-201ENST00000373433 AKR1B10O60218 316 aa12.25□□□□□ -0.45
RPRD1B-201ENST00000373433 SORBS3O60504 671 aa12.25□□□□□ -0.45
RPRD1B-201ENST00000373433 HEXIM1O94992 359 aaKnown RBP12.25□□□□□ -0.45
RPRD1B-201ENST00000373433 RPN1P04843 607 aaKnown RBP12.25□□□□□ -0.45
RPRD1B-201ENST00000373433 HLTFQ14527 1009 aaKnown RBP eCLIP12.25□□□□□ -0.45
RPRD1B-201ENST00000373433 NSMFQ6X4W1 530 aa12.25□□□□□ -0.45
RPRD1B-201ENST00000373433 IFT20Q8IY31 132 aa12.25□□□□□ -0.45
RPRD1B-201ENST00000373433 ATXN2Q99700 1313 aaKnown RBP12.25□□□□□ -0.45
RPRD1B-201ENST00000373433 RASSF9O75901 435 aa12.25□□□□□ -0.45
RPRD1B-201ENST00000373433 MTIF2P46199 727 aaKnown RBP12.25□□□□□ -0.45
RPRD1B-201ENST00000373433 PFKFB3Q16875 520 aaPredicted RBP12.25□□□□□ -0.45
RPRD1B-201ENST00000373433 ZNF658Q5TYW1 1059 aaPredicted RBP12.25□□□□□ -0.45
RPRD1B-201ENST00000373433 TTBK2Q6IQ55 1244 aa12.25□□□□□ -0.45
RPRD1B-201ENST00000373433 FERMT2Q96AC1 680 aa12.25□□□□□ -0.45
RPRD1B-201ENST00000373433 SYT17Q9BSW7 474 aa12.25□□□□□ -0.45
RPRD1B-201ENST00000373433 GLT8D2Q9H1C3 349 aa12.25□□□□□ -0.45
RPRD1B-201ENST00000373433 FAM107AO95990 144 aa12.24□□□□□ -0.45
RPRD1B-201ENST00000373433 TXKP42681 527 aa12.24□□□□□ -0.45
RPRD1B-201ENST00000373433 SPP2Q13103 211 aa12.24□□□□□ -0.45
RPRD1B-201ENST00000373433 CYFIP2Q96F07 1278 aa12.24□□□□□ -0.45
RPRD1B-201ENST00000373433 IDI2Q9BXS1 227 aa12.24□□□□□ -0.45
RPRD1B-201ENST00000373433 TSGA10Q9BZW7 698 aa12.24□□□□□ -0.45
RPRD1B-201ENST00000373433 IL17RBQ9NRM6 502 aa12.24□□□□□ -0.45
RPRD1B-201ENST00000373433 ZHX2Q9Y6X8 837 aa12.24□□□□□ -0.45
RPRD1B-201ENST00000373433 BUB1O43683 1085 aa12.24□□□□□ -0.45
RPRD1B-201ENST00000373433 ZBED4O75132 1171 aa12.24□□□□□ -0.45
RPRD1B-201ENST00000373433 ALAS1P13196 640 aa12.24□□□□□ -0.45
RPRD1B-201ENST00000373433 TCP1P17987 556 aaKnown RBP12.24□□□□□ -0.45
RPRD1B-201ENST00000373433 PMS1P54277 932 aaKnown RBP12.24□□□□□ -0.45
RPRD1B-201ENST00000373433 PAK2Q13177 524 aa12.24□□□□□ -0.45
RPRD1B-201ENST00000373433 YTHDF3Q7Z739 585 aaKnown RBP12.24□□□□□ -0.45
RPRD1B-201ENST00000373433 MRIQ9BWK5 157 aa12.24□□□□□ -0.45
RPRD1B-201ENST00000373433 RMND1Q9NWS8 449 aa12.24□□□□□ -0.45
RPRD1B-201ENST00000373433 FAM198AQ9UFP1 575 aa12.24□□□□□ -0.45
RPRD1B-201ENST00000373433 BAIAP2L1Q9UHR4 511 aa12.24□□□□□ -0.45
RPRD1B-201ENST00000373433 PCDHA4Q9UN74 947 aa12.24□□□□□ -0.45
RPRD1B-201ENST00000373433 USP17L10C9JJH3 530 aa12.24□□□□□ -0.45
RPRD1B-201ENST00000373433 PPP1R12AO14974 1030 aaPredicted RBP12.24□□□□□ -0.45
RPRD1B-201ENST00000373433 GTPBP6O43824 516 aaPredicted RBP12.24□□□□□ -0.45
RPRD1B-201ENST00000373433 GLI1P08151 1106 aa12.24□□□□□ -0.45
RPRD1B-201ENST00000373433 STAT6P42226 847 aa12.24□□□□□ -0.45
RPRD1B-201ENST00000373433 DNM2P50570 870 aa12.24□□□□□ -0.45
RPRD1B-201ENST00000373433 FAM83BQ5T0W9 1011 aa12.24□□□□□ -0.45
RPRD1B-201ENST00000373433 IRF2BP1Q8IU81 584 aa12.24□□□□□ -0.45
RPRD1B-201ENST00000373433 FMNL3Q8IVF7 1028 aa12.24□□□□□ -0.45
RPRD1B-201ENST00000373433 EXOC1Q9NV70 894 aa12.24□□□□□ -0.45
RPRD1B-201ENST00000373433 TPX2Q9ULW0 747 aaKnown RBP12.24□□□□□ -0.45
RPRD1B-201ENST00000373433 MYH13Q9UKX3 1938 aa12.23□□□□□ -0.45
RPRD1B-201ENST00000373433 OPLAHO14841 1288 aa12.23□□□□□ -0.45
RPRD1B-201ENST00000373433 GRIN3BO60391 1043 aa12.23□□□□□ -0.45
RPRD1B-201ENST00000373433 CDC37Q16543 378 aaPredicted RBP12.23□□□□□ -0.45
RPRD1B-201ENST00000373433 SYDE2Q5VT97 1194 aa12.23□□□□□ -0.45
RPRD1B-201ENST00000373433 GALNT17Q6IS24 598 aa12.23□□□□□ -0.45
RPRD1B-201ENST00000373433 FUKQ8N0W3 1084 aa12.23□□□□□ -0.45
RPRD1B-201ENST00000373433 C7orf43Q8WVR3 580 aa12.23□□□□□ -0.45
RPRD1B-201ENST00000373433 ATP6V1G3Q96LB4 118 aa12.23□□□□□ -0.45
RPRD1B-201ENST00000373433 TUBGCP2Q9BSJ2 902 aa12.23□□□□□ -0.45
RPRD1B-201ENST00000373433 CCDC170Q8IYT3 715 aa12.23□□□□□ -0.45
RPRD1B-201ENST00000373433 TTC16Q8NEE8 873 aa12.23□□□□□ -0.45
RPRD1B-201ENST00000373433 CAVIN3Q969G5 261 aa12.23□□□□□ -0.45
RPRD1B-201ENST00000373433 GINS2Q9Y248 185 aa12.23□□□□□ -0.45
RPRD1B-201ENST00000373433 PNMA6FA0A0J9YX94 578 aa12.23□□□□□ -0.45
RPRD1B-201ENST00000373433 CALRP27797 417 aaKnown RBP12.23□□□□□ -0.45
RPRD1B-201ENST00000373433 SHMT1P34896 483 aa12.23□□□□□ -0.45
RPRD1B-201ENST00000373433 PEX19P40855 299 aa12.23□□□□□ -0.45
RPRD1B-201ENST00000373433 SPRED3Q2MJR0 410 aa12.23□□□□□ -0.45
RPRD1B-201ENST00000373433 SPDYE2Q495Y8 402 aa12.23□□□□□ -0.45
RPRD1B-201ENST00000373433 CSGALNACT2Q8N6G5 542 aa12.23□□□□□ -0.45
RPRD1B-201ENST00000373433 SGSM3Q96HU1 749 aa12.23□□□□□ -0.45
RPRD1B-201ENST00000373433 FAXDC2Q96IV6 333 aa12.23□□□□□ -0.45
RPRD1B-201ENST00000373433 PLAAQ9Y263 795 aa12.23□□□□□ -0.45
RPRD1B-201ENST00000373433 NFKBIEO00221 500 aa12.22□□□□□ -0.45
RPRD1B-201ENST00000373433 PSMA7O14818 248 aa12.22□□□□□ -0.45
RPRD1B-201ENST00000373433 ZBED6P86452 979 aa12.22□□□□□ -0.45
RPRD1B-201ENST00000373433 MAEAQ7L5Y9 396 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms