RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 CREB1P16220 341 aa5.94□□□□□ -1.46
ATG4A-204ENST00000372246 TCP1P17987 556 aaKnown RBP5.94□□□□□ -1.46
ATG4A-204ENST00000372246 CCNE1P24864 410 aa5.94□□□□□ -1.46
ATG4A-204ENST00000372246 GBP2P32456 591 aaPredicted RBP5.94□□□□□ -1.46
ATG4A-204ENST00000372246 TUBB4BP68371 445 aa5.94□□□□□ -1.46
ATG4A-204ENST00000372246 ELF3P78545 371 aaPredicted RBP5.94□□□□□ -1.46
ATG4A-204ENST00000372246 DDR1Q08345 913 aa5.94□□□□□ -1.46
ATG4A-204ENST00000372246 PAK2Q13177 524 aa5.94□□□□□ -1.46
ATG4A-204ENST00000372246 ZNF211Q13398 564 aaPredicted RBP5.94□□□□□ -1.46
ATG4A-204ENST00000372246 BIRC2Q13490 618 aa5.94□□□□□ -1.46
ATG4A-204ENST00000372246 SNX1Q13596 522 aa5.94□□□□□ -1.46
ATG4A-204ENST00000372246 ALX1Q15699 326 aa5.94□□□□□ -1.46
ATG4A-204ENST00000372246 ZKSCAN8Q15776 578 aaPredicted RBP5.94□□□□□ -1.46
ATG4A-204ENST00000372246 KRT71Q3SY84 523 aa5.94□□□□□ -1.46
ATG4A-204ENST00000372246 CFAP221Q4G0U5 840 aa5.94□□□□□ -1.46
ATG4A-204ENST00000372246 VWA3BQ502W6 1294 aa5.94□□□□□ -1.46
ATG4A-204ENST00000372246 SUSD4Q5VX71 490 aa5.94□□□□□ -1.46
ATG4A-204ENST00000372246 OTUD6AQ7L8S5 288 aa5.94□□□□□ -1.46
ATG4A-204ENST00000372246 CPLX4Q7Z7G2 160 aa5.94□□□□□ -1.46
ATG4A-204ENST00000372246 CCDC170Q8IYT3 715 aa5.94□□□□□ -1.46
ATG4A-204ENST00000372246 FNBP4Q8N3X1 1017 aaPredicted RBP5.94□□□□□ -1.46
ATG4A-204ENST00000372246 EHBP1Q8NDI1 1231 aa5.94□□□□□ -1.46
ATG4A-204ENST00000372246 GLG1Q92896 1179 aa5.94□□□□□ -1.46
ATG4A-204ENST00000372246 RPGRIP1Q96KN7 1286 aa5.94□□□□□ -1.46
ATG4A-204ENST00000372246 ALS2CR12Q96Q35 445 aa5.94□□□□□ -1.46
ATG4A-204ENST00000372246 ELAC2Q9BQ52 826 aaKnown RBP5.94□□□□□ -1.46
ATG4A-204ENST00000372246 CCDC113Q9H0I3 377 aa5.94□□□□□ -1.46
ATG4A-204ENST00000372246 GOPCQ9HD26 462 aa5.94□□□□□ -1.46
ATG4A-204ENST00000372246 ABCF3Q9NUQ8 709 aa5.94□□□□□ -1.46
ATG4A-204ENST00000372246 KBTBD4Q9NVX7 518 aa5.94□□□□□ -1.46
ATG4A-204ENST00000372246 BIN2Q9UBW5 565 aaPredicted RBP5.94□□□□□ -1.46
ATG4A-204ENST00000372246 AJAP1Q9UKB5 411 aaPredicted RBP5.94□□□□□ -1.46
ATG4A-204ENST00000372246 STK38LQ9Y2H1 464 aa5.94□□□□□ -1.46
ATG4A-204ENST00000372246 FLT1P17948 1338 aa5.94□□□□□ -1.46
ATG4A-204ENST00000372246 FER1L4A9Z1Z3 1794 aa5.94□□□□□ -1.46
ATG4A-204ENST00000372246 GLI3P10071 1580 aa5.94□□□□□ -1.46
ATG4A-204ENST00000372246 LRP6O75581 1613 aa5.94□□□□□ -1.46
ATG4A-204ENST00000372246 CCDC194A0A1B0GVG4 234 aa5.94□□□□□ -1.46
ATG4A-204ENST00000372246 TSPY2A6NKD2 308 aa5.94□□□□□ -1.46
ATG4A-204ENST00000372246 GCOM1H8Y6P7 765 aaPredicted RBP5.94□□□□□ -1.46
ATG4A-204ENST00000372246 TRAPPC3O43617 180 aa5.94□□□□□ -1.46
ATG4A-204ENST00000372246 MYZAPP0CAP1 466 aa5.94□□□□□ -1.46
ATG4A-204ENST00000372246 USP8P40818 1118 aa5.94□□□□□ -1.46
ATG4A-204ENST00000372246 PRPF4BQ13523 1007 aaKnown RBP5.94□□□□□ -1.46
ATG4A-204ENST00000372246 ECM1Q16610 540 aa5.94□□□□□ -1.46
ATG4A-204ENST00000372246 ASTE1Q2TB18 679 aaPredicted RBP5.94□□□□□ -1.46
ATG4A-204ENST00000372246 RCSD1Q6JBY9 416 aa5.94□□□□□ -1.46
ATG4A-204ENST00000372246 SLC30A10Q6XR72 485 aa5.94□□□□□ -1.46
ATG4A-204ENST00000372246 SEPT14Q6ZU15 432 aa5.94□□□□□ -1.46
ATG4A-204ENST00000372246 NBPF5PQ86XG9 351 aaPredicted RBP5.94□□□□□ -1.46
ATG4A-204ENST00000372246 CLEC10AQ8IUN9 316 aa5.94□□□□□ -1.46
ATG4A-204ENST00000372246 ZNF526Q8TF50 670 aaPredicted RBP5.94□□□□□ -1.46
ATG4A-204ENST00000372246 NLRP7Q8WX94 980 aa5.94□□□□□ -1.46
ATG4A-204ENST00000372246 PIGBQ92521 554 aa5.94□□□□□ -1.46
ATG4A-204ENST00000372246 SGSM3Q96HU1 749 aa5.94□□□□□ -1.46
ATG4A-204ENST00000372246 INPP4AQ96PE3 977 aaPredicted RBP5.94□□□□□ -1.46
ATG4A-204ENST00000372246 NOX5Q96PH1 765 aa5.94□□□□□ -1.46
ATG4A-204ENST00000372246 RIOK1Q9BRS2 568 aaKnown RBP5.94□□□□□ -1.46
ATG4A-204ENST00000372246 MXD3Q9BW11 206 aa5.94□□□□□ -1.46
ATG4A-204ENST00000372246 LSM14BQ9BX40 385 aaKnown RBP5.94□□□□□ -1.46
ATG4A-204ENST00000372246 ZHX3Q9H4I2 956 aa5.94□□□□□ -1.46
ATG4A-204ENST00000372246 NOD2Q9HC29 1040 aa5.94□□□□□ -1.46
ATG4A-204ENST00000372246 DNAJC17Q9NVM6 304 aaKnown RBP5.94□□□□□ -1.46
ATG4A-204ENST00000372246 RMND1Q9NWS8 449 aa5.94□□□□□ -1.46
ATG4A-204ENST00000372246 ARPP21Q9UBL0 812 aaPredicted RBP5.94□□□□□ -1.46
ATG4A-204ENST00000372246 MYH6P13533 1939 aa5.94□□□□□ -1.46
ATG4A-204ENST00000372246 SART1O43290 800 aaKnown RBP5.93□□□□□ -1.46
ATG4A-204ENST00000372246 ATP6V1G2O95670 118 aa5.93□□□□□ -1.46
ATG4A-204ENST00000372246 SLC5A1P13866 664 aa5.93□□□□□ -1.46
ATG4A-204ENST00000372246 GCFC2P16383 781 aaKnown RBP5.93□□□□□ -1.46
ATG4A-204ENST00000372246 PRDX5P30044 214 aa5.93□□□□□ -1.46
ATG4A-204ENST00000372246 CHRNDQ07001 517 aa5.93□□□□□ -1.46
ATG4A-204ENST00000372246 TNIP1Q15025 636 aa5.93□□□□□ -1.46
ATG4A-204ENST00000372246 PFKFB3Q16875 520 aaPredicted RBP5.93□□□□□ -1.46
ATG4A-204ENST00000372246 WLSQ5T9L3 541 aa5.93□□□□□ -1.46
ATG4A-204ENST00000372246 IQCEQ6IPM2 695 aa5.93□□□□□ -1.46
ATG4A-204ENST00000372246 PDXDC1Q6P996 788 aa5.93□□□□□ -1.46
ATG4A-204ENST00000372246 GIGYF2Q6Y7W6 1299 aaKnown RBP5.93□□□□□ -1.46
ATG4A-204ENST00000372246 CPNE8Q86YQ8 564 aa5.93□□□□□ -1.46
ATG4A-204ENST00000372246 RETREG2Q8NC44 543 aa5.93□□□□□ -1.46
ATG4A-204ENST00000372246 PARD3BQ8TEW8 1205 aa5.93□□□□□ -1.46
ATG4A-204ENST00000372246 AGAP11Q8TF27 550 aa5.93□□□□□ -1.46
ATG4A-204ENST00000372246 MKL1Q969V6 931 aa5.93□□□□□ -1.46
ATG4A-204ENST00000372246 ZBTB10Q96DT7 871 aa5.93□□□□□ -1.46
ATG4A-204ENST00000372246 SPDL1Q96EA4 605 aa5.93□□□□□ -1.46
ATG4A-204ENST00000372246 ZNF570Q96NI8 536 aa5.93□□□□□ -1.46
ATG4A-204ENST00000372246 UBA5Q9GZZ9 404 aa5.93□□□□□ -1.46
ATG4A-204ENST00000372246 IL17RBQ9NRM6 502 aa5.93□□□□□ -1.46
ATG4A-204ENST00000372246 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.93□□□□□ -1.46
ATG4A-204ENST00000372246 SAP30BPQ9UHR5 308 aaKnown RBP5.93□□□□□ -1.46
ATG4A-204ENST00000372246 STX8Q9UNK0 236 aa5.93□□□□□ -1.46
ATG4A-204ENST00000372246 BAZ2AQ9UIF9 1905 aaKnown RBP5.93□□□□□ -1.46
ATG4A-204ENST00000372246 ATRNO75882 1429 aa5.93□□□□□ -1.46
ATG4A-204ENST00000372246 SLC37A4O43826 429 aa5.93□□□□□ -1.46
ATG4A-204ENST00000372246 CTNND1O60716 968 aaKnown RBP5.93□□□□□ -1.46
ATG4A-204ENST00000372246 DIAPH2O60879 1101 aa5.93□□□□□ -1.46
ATG4A-204ENST00000372246 AP1G2O75843 785 aa5.93□□□□□ -1.46
ATG4A-204ENST00000372246 TDP2O95551 362 aa5.93□□□□□ -1.46
ATG4A-204ENST00000372246 CHN1P15882 459 aa5.93□□□□□ -1.46
ATG4A-204ENST00000372246 SLC9A1P19634 815 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms