RNA–Protein interactions for RNA: ENST00000370794.7

USP33-204, Transcript of ubiquitin specific peptidase 33, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP33, Length 4,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-204ENST00000370794 NT5C1BQ96P26 610 aa13.82□□□□□ -0.2
USP33-204ENST00000370794 PPP1R9AQ9ULJ8 1098 aa13.82□□□□□ -0.2
USP33-204ENST00000370794 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.82□□□□□ -0.2
USP33-204ENST00000370794 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.82□□□□□ -0.2
USP33-204ENST00000370794 RGS2P41220 211 aa13.82□□□□□ -0.2
USP33-204ENST00000370794 SARM1Q6SZW1 724 aa13.82□□□□□ -0.2
USP33-204ENST00000370794 DDX12PQ92771 950 aa13.82□□□□□ -0.2
USP33-204ENST00000370794 KCNB2Q92953 911 aa13.82□□□□□ -0.2
USP33-204ENST00000370794 DHTKD1Q96HY7 919 aaPredicted RBP13.82□□□□□ -0.2
USP33-204ENST00000370794 NXF1Q9UBU9 619 aaKnown RBP13.82□□□□□ -0.2
USP33-204ENST00000370794 DENND3A2RUS2 1198 aa13.81□□□□□ -0.2
USP33-204ENST00000370794 EPHA7Q15375 998 aa13.81□□□□□ -0.2
USP33-204ENST00000370794 LONRF3Q496Y0 759 aa13.81□□□□□ -0.2
USP33-204ENST00000370794 ZFPM1Q8IX07 1006 aa13.81□□□□□ -0.2
USP33-204ENST00000370794 TRPM4Q8TD43 1214 aa13.81□□□□□ -0.2
USP33-204ENST00000370794 CCDC97Q96F63 343 aaPredicted RBP13.81□□□□□ -0.2
USP33-204ENST00000370794 MSTO1Q9BUK6 570 aa13.81□□□□□ -0.2
USP33-204ENST00000370794 RPF1Q9H9Y2 349 aaKnown RBP13.81□□□□□ -0.2
USP33-204ENST00000370794 USTQ9Y2C2 406 aa13.81□□□□□ -0.2
USP33-204ENST00000370794 MRC1P22897 1456 aa13.81□□□□□ -0.2
USP33-204ENST00000370794 CAPN9O14815 690 aa13.81□□□□□ -0.2
USP33-204ENST00000370794 EXOC3L4Q17RC7 722 aa13.81□□□□□ -0.2
USP33-204ENST00000370794 MAP9Q49MG5 647 aa13.81□□□□□ -0.2
USP33-204ENST00000370794 PDHXO00330 501 aa13.81□□□□□ -0.2
USP33-204ENST00000370794 SHMT1P34896 483 aa13.81□□□□□ -0.2
USP33-204ENST00000370794 HERVK_113P62684 666 aa13.81□□□□□ -0.2
USP33-204ENST00000370794 NBPF11Q86T75 865 aa13.81□□□□□ -0.2
USP33-204ENST00000370794 METTL23Q86XA0 190 aa13.81□□□□□ -0.2
USP33-204ENST00000370794 CNOT6LQ96LI5 555 aaKnown RBP13.81□□□□□ -0.2
USP33-204ENST00000370794 MAP3K14Q99558 947 aa13.81□□□□□ -0.2
USP33-204ENST00000370794 NUCKS1Q9H1E3 243 aaKnown RBP13.81□□□□□ -0.2
USP33-204ENST00000370794 AGTPBP1Q9UPW5 1226 aa13.81□□□□□ -0.2
USP33-204ENST00000370794 GOLGA8IPA6NC78 632 aa13.81□□□□□ -0.2
USP33-204ENST00000370794 GOLGA8JA6NMD2 632 aa13.81□□□□□ -0.2
USP33-204ENST00000370794 CLDN3O15551 220 aa13.81□□□□□ -0.2
USP33-204ENST00000370794 ICAM1P05362 532 aa13.81□□□□□ -0.2
USP33-204ENST00000370794 ARPP19P56211 112 aa13.81□□□□□ -0.2
USP33-204ENST00000370794 ALCAMQ13740 583 aa13.81□□□□□ -0.2
USP33-204ENST00000370794 GLT1D1Q96MS3 346 aa13.81□□□□□ -0.2
USP33-204ENST00000370794 MTRQ99707 1265 aa13.81□□□□□ -0.2
USP33-204ENST00000370794 SH2D3AQ9BRG2 576 aa13.81□□□□□ -0.2
USP33-204ENST00000370794 EVCP57679 992 aa13.8□□□□□ -0.2
USP33-204ENST00000370794 PPP2R3AQ06190 1150 aa13.8□□□□□ -0.2
USP33-204ENST00000370794 CKAP4Q07065 602 aaKnown RBP13.8□□□□□ -0.2
USP33-204ENST00000370794 ZNF569Q5MCW4 686 aa13.8□□□□□ -0.2
USP33-204ENST00000370794 SLFN12LQ6IEE8 588 aa13.8□□□□□ -0.2
USP33-204ENST00000370794 MROH8Q9H579 483 aa13.8□□□□□ -0.2
USP33-204ENST00000370794 TOPORSQ9NS56 1045 aaPredicted RBP13.8□□□□□ -0.2
USP33-204ENST00000370794 RGL1Q9NZL6 768 aa13.8□□□□□ -0.2
USP33-204ENST00000370794 PP2D1A8MPX8 630 aa13.8□□□□□ -0.2
USP33-204ENST00000370794 MCM3P25205 808 aa13.8□□□□□ -0.2
USP33-204ENST00000370794 GTF2F1P35269 517 aaKnown RBP eCLIP13.8□□□□□ -0.2
USP33-204ENST00000370794 DEFB115Q30KQ5 88 aa13.8□□□□□ -0.2
USP33-204ENST00000370794 CYP26C1Q6V0L0 522 aa13.8□□□□□ -0.2
USP33-204ENST00000370794 EIF2AK1Q9BQI3 630 aaKnown RBP13.8□□□□□ -0.2
USP33-204ENST00000370794 KIAA1683Q9H0B3 1180 aa13.8□□□□□ -0.2
USP33-204ENST00000370794 MYO1AQ9UBC5 1043 aa13.8□□□□□ -0.2
USP33-204ENST00000370794 SHTN1A0MZ66 631 aa13.8□□□□□ -0.2
USP33-204ENST00000370794 ARHGEF37A1IGU5 675 aa13.8□□□□□ -0.2
USP33-204ENST00000370794 SMARCA1P28370 1054 aa13.8□□□□□ -0.2
USP33-204ENST00000370794 ETF1P62495 437 aaKnown RBP13.8□□□□□ -0.2
USP33-204ENST00000370794 GABPB1Q06547 395 aaPredicted RBP13.8□□□□□ -0.2
USP33-204ENST00000370794 PPFIA1Q13136 1202 aa13.8□□□□□ -0.2
USP33-204ENST00000370794 SPECC1LQ69YQ0 1117 aa13.8□□□□□ -0.2
USP33-204ENST00000370794 TAAR1Q96RJ0 339 aa13.8□□□□□ -0.2
USP33-204ENST00000370794 TUBGCP2Q9BSJ2 902 aa13.8□□□□□ -0.2
USP33-204ENST00000370794 ZNF233A6NK53 670 aa13.79□□□□□ -0.2
USP33-204ENST00000370794 MAPK4P31152 587 aa13.79□□□□□ -0.2
USP33-204ENST00000370794 POLR2FP61218 127 aaKnown RBP13.79□□□□□ -0.2
USP33-204ENST00000370794 MYL7Q01449 175 aa13.79□□□□□ -0.2
USP33-204ENST00000370794 PSMD2Q13200 908 aa13.79□□□□□ -0.2
USP33-204ENST00000370794 CEP112Q8N8E3 955 aa13.79□□□□□ -0.2
USP33-204ENST00000370794 MRIQ9BWK5 157 aa13.79□□□□□ -0.2
USP33-204ENST00000370794 CARD6Q9BX69 1037 aa13.79□□□□□ -0.2
USP33-204ENST00000370794 GCOM2Q9BZD3 368 aaPredicted RBP13.79□□□□□ -0.2
USP33-204ENST00000370794 SMARCAD1Q9H4L7 1026 aa13.79□□□□□ -0.2
USP33-204ENST00000370794 PCDHAC2Q9Y5I4 1007 aa13.79□□□□□ -0.2
USP33-204ENST00000370794 CNTNAP5Q8WYK1 1306 aa13.79□□□□□ -0.2
USP33-204ENST00000370794 TCRBV5S4A2TA0A5A2 114 aa13.79□□□□□ -0.2
USP33-204ENST00000370794 CTAGE9A4FU28 777 aa13.79□□□□□ -0.2
USP33-204ENST00000370794 SLC16A4O15374 487 aa13.79□□□□□ -0.2
USP33-204ENST00000370794 PGK2P07205 417 aa13.79□□□□□ -0.2
USP33-204ENST00000370794 MXI1P50539 228 aa13.79□□□□□ -0.2
USP33-204ENST00000370794 ZNF658Q5TYW1 1059 aaPredicted RBP13.79□□□□□ -0.2
USP33-204ENST00000370794 SFR1Q86XK3 245 aa13.79□□□□□ -0.2
USP33-204ENST00000370794 PAGE5Q96GU1 130 aa13.79□□□□□ -0.2
USP33-204ENST00000370794 EFCC1Q9HA90 598 aa13.79□□□□□ -0.2
USP33-204ENST00000370794 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.79□□□□□ -0.2
USP33-204ENST00000370794 STIM2Q9P246 746 aa13.79□□□□□ -0.2
USP33-204ENST00000370794 CCNE1P24864 410 aa13.79□□□□□ -0.2
USP33-204ENST00000370794 PPATQ06203 517 aa13.79□□□□□ -0.2
USP33-204ENST00000370794 ZNF568Q3ZCX4 644 aa13.79□□□□□ -0.2
USP33-204ENST00000370794 TYW1BQ6NUM6 668 aa13.79□□□□□ -0.2
USP33-204ENST00000370794 TMTC1Q8IUR5 882 aa13.79□□□□□ -0.2
USP33-204ENST00000370794 ZC3H15Q8WU90 426 aaKnown RBP13.79□□□□□ -0.2
USP33-204ENST00000370794 SNX25Q9H3E2 840 aa13.79□□□□□ -0.2
USP33-204ENST00000370794 FAM205CA6NFA0 338 aa13.78□□□□□ -0.2
USP33-204ENST00000370794 STXBP3O00186 592 aa13.78□□□□□ -0.2
USP33-204ENST00000370794 ERCC5P28715 1186 aaPredicted RBP13.78□□□□□ -0.2
USP33-204ENST00000370794 VGLL4Q14135 290 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms