RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 SLC10A6Q3KNW5 377 aa4.43□□□□□ -1.7
MCF2-203ENST00000370576 LRRC24Q50LG9 513 aa4.43□□□□□ -1.7
MCF2-203ENST00000370576 RPUSD3Q6P087 351 aaKnown RBP4.43□□□□□ -1.7
MCF2-203ENST00000370576 SIMC1Q8NDZ2 872 aa4.43□□□□□ -1.7
MCF2-203ENST00000370576 ANKK1Q8NFD2 765 aa4.43□□□□□ -1.7
MCF2-203ENST00000370576 NKX2-3Q8TAU0 364 aa4.43□□□□□ -1.7
MCF2-203ENST00000370576 PTCD2Q8WV60 388 aaKnown RBP4.43□□□□□ -1.7
MCF2-203ENST00000370576 GSDMAQ96QA5 445 aa4.43□□□□□ -1.7
MCF2-203ENST00000370576 LLPHQ9BRT6 129 aaKnown RBP4.43□□□□□ -1.7
MCF2-203ENST00000370576 TARS2Q9BW92 718 aaKnown RBP4.43□□□□□ -1.7
MCF2-203ENST00000370576 SPON1Q9HCB6 807 aa4.43□□□□□ -1.7
MCF2-203ENST00000370576 STIM2Q9P246 746 aa4.43□□□□□ -1.7
MCF2-203ENST00000370576 MAST3O60307 1309 aa4.43□□□□□ -1.7
MCF2-203ENST00000370576 NEDD4P46934 1319 aa4.43□□□□□ -1.7
MCF2-203ENST00000370576 C2orf72A6NCS6 295 aa4.43□□□□□ -1.7
MCF2-203ENST00000370576 TISP43B9A030 160 aa4.43□□□□□ -1.7
MCF2-203ENST00000370576 B9A039 149 aa4.43□□□□□ -1.7
MCF2-203ENST00000370576 RTCAO00442 366 aaKnown RBP4.43□□□□□ -1.7
MCF2-203ENST00000370576 ELL2O00472 640 aaPredicted RBP4.43□□□□□ -1.7
MCF2-203ENST00000370576 NDUFB5O43674 189 aa4.43□□□□□ -1.7
MCF2-203ENST00000370576 GNRH1P01148 92 aa4.43□□□□□ -1.7
MCF2-203ENST00000370576 ANXA1P04083 346 aa4.43□□□□□ -1.7
MCF2-203ENST00000370576 ASGR2P07307 311 aa4.43□□□□□ -1.7
MCF2-203ENST00000370576 IL11P20809 199 aa4.43□□□□□ -1.7
MCF2-203ENST00000370576 SLC7A5Q01650 507 aa4.43□□□□□ -1.7
MCF2-203ENST00000370576 GHRHRQ02643 423 aa4.43□□□□□ -1.7
MCF2-203ENST00000370576 SCARB2Q14108 478 aa4.43□□□□□ -1.7
MCF2-203ENST00000370576 ZNF827Q17R98 1081 aa4.43□□□□□ -1.7
MCF2-203ENST00000370576 C5orf22Q49AR2 442 aa4.43□□□□□ -1.7
MCF2-203ENST00000370576 SYDE2Q5VT97 1194 aa4.43□□□□□ -1.7
MCF2-203ENST00000370576 LMBR1LQ6UX01 489 aa4.43□□□□□ -1.7
MCF2-203ENST00000370576 CNTROBQ8N137 903 aa4.43□□□□□ -1.7
MCF2-203ENST00000370576 RBBP8NLQ8NC74 664 aaPredicted RBP4.43□□□□□ -1.7
MCF2-203ENST00000370576 SLC30A5Q8TAD4 765 aa4.43□□□□□ -1.7
MCF2-203ENST00000370576 DDX1Q92499 740 aaKnown RBP4.43□□□□□ -1.7
MCF2-203ENST00000370576 CDK5RAP3Q96JB5 506 aa4.43□□□□□ -1.7
MCF2-203ENST00000370576 BRIP1Q9BX63 1249 aa4.43□□□□□ -1.7
MCF2-203ENST00000370576 SERINC1Q9NRX5 453 aa4.43□□□□□ -1.7
MCF2-203ENST00000370576 KBTBD4Q9NVX7 518 aa4.43□□□□□ -1.7
MCF2-203ENST00000370576 SIRT5Q9NXA8 310 aa4.43□□□□□ -1.7
MCF2-203ENST00000370576 NFKBIL1Q9UBC1 381 aaPredicted RBP4.43□□□□□ -1.7
MCF2-203ENST00000370576 PCSK1NQ9UHG2 260 aa4.43□□□□□ -1.7
MCF2-203ENST00000370576 GGT7Q9UJ14 662 aa4.43□□□□□ -1.7
MCF2-203ENST00000370576 ABCB7O75027 752 aa4.42□□□□□ -1.7
MCF2-203ENST00000370576 AOC2O75106 756 aa4.42□□□□□ -1.7
MCF2-203ENST00000370576 MAFO75444 373 aaPredicted RBP4.42□□□□□ -1.7
MCF2-203ENST00000370576 ELP1O95163 1332 aa4.42□□□□□ -1.7
MCF2-203ENST00000370576 MMEP08473 750 aa4.42□□□□□ -1.7
MCF2-203ENST00000370576 ZSCAN20P17040 1043 aaPredicted RBP4.42□□□□□ -1.7
MCF2-203ENST00000370576 GCGRP47871 477 aa4.42□□□□□ -1.7
MCF2-203ENST00000370576 DESI1Q6ICB0 168 aa4.42□□□□□ -1.7
MCF2-203ENST00000370576 MRM1Q6IN84 353 aaKnown RBP4.42□□□□□ -1.7
MCF2-203ENST00000370576 KRT27Q7Z3Y8 459 aa4.42□□□□□ -1.7
MCF2-203ENST00000370576 SIAH1Q8IUQ4 282 aa4.42□□□□□ -1.7
MCF2-203ENST00000370576 TPH2Q8IWU9 490 aa4.42□□□□□ -1.7
MCF2-203ENST00000370576 ZFPM1Q8IX07 1006 aa4.42□□□□□ -1.7
MCF2-203ENST00000370576 EXOC6BQ9Y2D4 811 aa4.42□□□□□ -1.7
MCF2-203ENST00000370576 MAGED1Q9Y5V3 778 aaPredicted RBP4.42□□□□□ -1.7
MCF2-203ENST00000370576 A0A0D9SFI3 127 aa4.42□□□□□ -1.7
MCF2-203ENST00000370576 IRS4O14654 1257 aaPredicted RBP4.42□□□□□ -1.7
MCF2-203ENST00000370576 ZBTB39O15060 712 aa4.42□□□□□ -1.7
MCF2-203ENST00000370576 P4HA1P13674 534 aa4.42□□□□□ -1.7
MCF2-203ENST00000370576 IGFBP4P22692 258 aa4.42□□□□□ -1.7
MCF2-203ENST00000370576 GUCA2AQ02747 115 aa4.42□□□□□ -1.7
MCF2-203ENST00000370576 FUT2Q10981 343 aa4.42□□□□□ -1.7
MCF2-203ENST00000370576 PICALMQ13492 652 aa4.42□□□□□ -1.7
MCF2-203ENST00000370576 GRAPQ13588 217 aa4.42□□□□□ -1.7
MCF2-203ENST00000370576 PDE1CQ14123 709 aaPredicted RBP4.42□□□□□ -1.7
MCF2-203ENST00000370576 PREPLQ4J6C6 727 aaPredicted RBP4.42□□□□□ -1.7
MCF2-203ENST00000370576 RNF219Q5W0B1 726 aaPredicted RBP4.42□□□□□ -1.7
MCF2-203ENST00000370576 NUGGCQ68CJ6 796 aa4.42□□□□□ -1.7
MCF2-203ENST00000370576 SP8Q8IXZ3 490 aa4.42□□□□□ -1.7
MCF2-203ENST00000370576 VPS52Q8N1B4 723 aa4.42□□□□□ -1.7
MCF2-203ENST00000370576 GRAPLQ8TC17 118 aaPredicted RBP4.42□□□□□ -1.7
MCF2-203ENST00000370576 EIF2AK1Q9BQI3 630 aaKnown RBP4.42□□□□□ -1.7
MCF2-203ENST00000370576 NOC4LQ9BVI4 516 aaKnown RBP4.42□□□□□ -1.7
MCF2-203ENST00000370576 C2orf40Q9H1Z8 148 aa4.42□□□□□ -1.7
MCF2-203ENST00000370576 SMOC1Q9H4F8 434 aa4.42□□□□□ -1.7
MCF2-203ENST00000370576 CRTAC1Q9NQ79 661 aa4.42□□□□□ -1.7
MCF2-203ENST00000370576 MINPP1Q9UNW1 487 aa4.42□□□□□ -1.7
MCF2-203ENST00000370576 DNM3Q9UQ16 869 aa4.42□□□□□ -1.7
MCF2-203ENST00000370576 KIAA1217Q5T5P2 1943 aa4.42□□□□□ -1.7
MCF2-203ENST00000370576 CCDC196A0A1B0GTZ2 297 aa4.42□□□□□ -1.7
MCF2-203ENST00000370576 PMM2O15305 246 aa4.42□□□□□ -1.7
MCF2-203ENST00000370576 RNF113AO15541 343 aaKnown RBP4.42□□□□□ -1.7
MCF2-203ENST00000370576 CLASP2O75122 1294 aaKnown RBP4.42□□□□□ -1.7
MCF2-203ENST00000370576 MUTP22033 750 aa4.42□□□□□ -1.7
MCF2-203ENST00000370576 ITGA6P23229 1130 aa4.42□□□□□ -1.7
MCF2-203ENST00000370576 ADD1P35611 737 aaKnown RBP4.42□□□□□ -1.7
MCF2-203ENST00000370576 PTH1RQ03431 593 aa4.42□□□□□ -1.7
MCF2-203ENST00000370576 TPGS2Q68CL5 300 aa4.42□□□□□ -1.7
MCF2-203ENST00000370576 PRR5LQ6MZQ0 368 aa4.42□□□□□ -1.7
MCF2-203ENST00000370576 TMEM92Q6UXU6 159 aa4.42□□□□□ -1.7
MCF2-203ENST00000370576 STOX1Q6ZVD7 989 aa4.42□□□□□ -1.7
MCF2-203ENST00000370576 RUFY3Q7L099 469 aa4.42□□□□□ -1.7
MCF2-203ENST00000370576 UBE3BQ7Z3V4 1068 aa4.42□□□□□ -1.7
MCF2-203ENST00000370576 MAATS1Q7Z4T9 603 aa4.42□□□□□ -1.7
MCF2-203ENST00000370576 GALNT12Q8IXK2 581 aa4.42□□□□□ -1.7
MCF2-203ENST00000370576 ST13P5Q8NFI4 369 aaPredicted RBP4.42□□□□□ -1.7
MCF2-203ENST00000370576 FBXO27Q8NI29 283 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms