RNA–Protein interactions for RNA: ENST00000370558.8

SH3GLB1-201, Transcript of SH3 domain containing GRB2 like, endophilin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GLB1, Length 6,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GLB1-201ENST00000370558 SNAP25P60880 206 aa11.91□□□□□ -0.5
SH3GLB1-201ENST00000370558 RNF219Q5W0B1 726 aaPredicted RBP11.91□□□□□ -0.5
SH3GLB1-201ENST00000370558 ATG16L1Q676U5 607 aa11.91□□□□□ -0.5
SH3GLB1-201ENST00000370558 DHX38Q92620 1227 aaKnown RBP11.91□□□□□ -0.5
SH3GLB1-201ENST00000370558 HACD3Q9P035 362 aa11.91□□□□□ -0.5
SH3GLB1-201ENST00000370558 ARHGEF12Q9NZN5 1544 aa11.91□□□□□ -0.5
SH3GLB1-201ENST00000370558 EXOC1LA0A1B0GW35 172 aa11.9□□□□□ -0.5
SH3GLB1-201ENST00000370558 K7ERI5 159 aa11.9□□□□□ -0.5
SH3GLB1-201ENST00000370558 CDC25AP30304 524 aa11.9□□□□□ -0.5
SH3GLB1-201ENST00000370558 ESRRGP62508 458 aa11.9□□□□□ -0.5
SH3GLB1-201ENST00000370558 PKP1Q13835 747 aa11.9□□□□□ -0.5
SH3GLB1-201ENST00000370558 PROSER3Q2NL68 480 aa11.9□□□□□ -0.5
SH3GLB1-201ENST00000370558 CATSPER4Q7RTX7 472 aa11.9□□□□□ -0.5
SH3GLB1-201ENST00000370558 LCA5Q86VQ0 697 aa11.9□□□□□ -0.5
SH3GLB1-201ENST00000370558 ERICH1Q86X53 443 aa11.9□□□□□ -0.5
SH3GLB1-201ENST00000370558 RNF168Q8IYW5 571 aaPredicted RBP11.9□□□□□ -0.5
SH3GLB1-201ENST00000370558 GPT2Q8TD30 523 aa11.9□□□□□ -0.5
SH3GLB1-201ENST00000370558 POLR3EQ9NVU0 708 aa11.9□□□□□ -0.5
SH3GLB1-201ENST00000370558 MMP1P03956 469 aa11.9□□□□□ -0.5
SH3GLB1-201ENST00000370558 PLS3P13797 630 aa11.9□□□□□ -0.5
SH3GLB1-201ENST00000370558 HSPA6P17066 643 aa11.9□□□□□ -0.5
SH3GLB1-201ENST00000370558 OCRLQ01968 901 aa11.9□□□□□ -0.5
SH3GLB1-201ENST00000370558 RASEFQ8IZ41 740 aa11.9□□□□□ -0.5
SH3GLB1-201ENST00000370558 TRIM4Q9C037 500 aa11.9□□□□□ -0.5
SH3GLB1-201ENST00000370558 ITM2BQ9Y287 266 aa11.9□□□□□ -0.5
SH3GLB1-201ENST00000370558 ATF5Q9Y2D1 282 aaPredicted RBP11.9□□□□□ -0.5
SH3GLB1-201ENST00000370558 SERPING1P05155 500 aa11.9□□□□□ -0.5
SH3GLB1-201ENST00000370558 CYP21A2P08686 494 aa11.9□□□□□ -0.5
SH3GLB1-201ENST00000370558 EIF4A3P38919 411 aaKnown RBP11.9□□□□□ -0.5
SH3GLB1-201ENST00000370558 DALRD3Q5D0E6 543 aaKnown RBP11.9□□□□□ -0.5
SH3GLB1-201ENST00000370558 CIAPIN1Q6FI81 312 aa11.9□□□□□ -0.5
SH3GLB1-201ENST00000370558 ANTXR1Q9H6X2 564 aa11.9□□□□□ -0.5
SH3GLB1-201ENST00000370558 ANLNQ9NQW6 1124 aa11.9□□□□□ -0.5
SH3GLB1-201ENST00000370558 GINM1Q9NU53 330 aa11.9□□□□□ -0.5
SH3GLB1-201ENST00000370558 CDC25BP30305 580 aa11.9□□□□□ -0.5
SH3GLB1-201ENST00000370558 NR5A1Q13285 461 aa11.9□□□□□ -0.5
SH3GLB1-201ENST00000370558 TRMT10CQ7L0Y3 403 aaKnown RBP11.9□□□□□ -0.5
SH3GLB1-201ENST00000370558 NSUN7Q8NE18 718 aaKnown RBP11.9□□□□□ -0.5
SH3GLB1-201ENST00000370558 RWDD2AQ9UIY3 292 aa11.9□□□□□ -0.5
SH3GLB1-201ENST00000370558 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.9□□□□□ -0.5
SH3GLB1-201ENST00000370558 USP17L3A6NCW0 530 aa11.9□□□□□ -0.51
SH3GLB1-201ENST00000370558 USP17L4A6NCW7 530 aa11.9□□□□□ -0.51
SH3GLB1-201ENST00000370558 SLFN14P0C7P3 912 aa11.9□□□□□ -0.51
SH3GLB1-201ENST00000370558 PSMD2Q13200 908 aa11.9□□□□□ -0.51
SH3GLB1-201ENST00000370558 SLMAPQ14BN4 828 aa11.9□□□□□ -0.51
SH3GLB1-201ENST00000370558 DPCR1Q3MIW9 517 aa11.9□□□□□ -0.51
SH3GLB1-201ENST00000370558 USP17L1Q7RTZ2 530 aa11.9□□□□□ -0.51
SH3GLB1-201ENST00000370558 SRRM1Q8IYB3 904 aaKnown RBP11.9□□□□□ -0.51
SH3GLB1-201ENST00000370558 THEM5Q8N1Q8 247 aa11.9□□□□□ -0.51
SH3GLB1-201ENST00000370558 SEC31AO94979 1220 aaKnown RBP11.89□□□□□ -0.51
SH3GLB1-201ENST00000370558 MYL1P05976 194 aa11.89□□□□□ -0.51
SH3GLB1-201ENST00000370558 RECQLP46063 649 aaPredicted RBP11.89□□□□□ -0.51
SH3GLB1-201ENST00000370558 ARHGDIAP52565 204 aa11.89□□□□□ -0.51
SH3GLB1-201ENST00000370558 SEPT2Q15019 361 aa11.89□□□□□ -0.51
SH3GLB1-201ENST00000370558 FAM182BQ5T319 152 aa11.89□□□□□ -0.51
SH3GLB1-201ENST00000370558 RC3H1Q5TC82 1133 aaKnown RBP11.89□□□□□ -0.51
SH3GLB1-201ENST00000370558 BZW1Q7L1Q6 419 aaKnown RBP11.89□□□□□ -0.51
SH3GLB1-201ENST00000370558 FTOQ9C0B1 505 aaKnown RBP eCLIP11.89□□□□□ -0.51
SH3GLB1-201ENST00000370558 NHEJ1Q9H9Q4 299 aaPredicted RBP11.89□□□□□ -0.51
SH3GLB1-201ENST00000370558 PLCG1P19174 1290 aa11.89□□□□□ -0.51
SH3GLB1-201ENST00000370558 PSMA2P25787 234 aa11.89□□□□□ -0.51
SH3GLB1-201ENST00000370558 KCNQ4P56696 695 aa11.89□□□□□ -0.51
SH3GLB1-201ENST00000370558 SLFN12LQ6IEE8 588 aa11.89□□□□□ -0.51
SH3GLB1-201ENST00000370558 ZNF589Q86UQ0 364 aaPredicted RBP11.89□□□□□ -0.51
SH3GLB1-201ENST00000370558 ACRBPQ8NEB7 543 aa11.89□□□□□ -0.51
SH3GLB1-201ENST00000370558 GIPC2Q8TF65 315 aa11.89□□□□□ -0.51
SH3GLB1-201ENST00000370558 PACSIN2Q9UNF0 486 aaPredicted RBP11.89□□□□□ -0.51
SH3GLB1-201ENST00000370558 TMEM247A6NEH6 219 aa11.89□□□□□ -0.51
SH3GLB1-201ENST00000370558 CTNND1O60716 968 aaKnown RBP11.89□□□□□ -0.51
SH3GLB1-201ENST00000370558 NSUN2Q08J23 767 aaKnown RBP eCLIP11.89□□□□□ -0.51
SH3GLB1-201ENST00000370558 FAM133BQ5BKY9 247 aaKnown RBP11.89□□□□□ -0.51
SH3GLB1-201ENST00000370558 KRT27Q7Z3Y8 459 aa11.89□□□□□ -0.51
SH3GLB1-201ENST00000370558 PYROXD1Q8WU10 500 aa11.89□□□□□ -0.51
SH3GLB1-201ENST00000370558 THAP9Q9H5L6 903 aa11.89□□□□□ -0.51
SH3GLB1-201ENST00000370558 PNMA3Q9UL41 463 aa11.89□□□□□ -0.51
SH3GLB1-201ENST00000370558 FRMD3A2A2Y4 597 aa11.89□□□□□ -0.51
SH3GLB1-201ENST00000370558 NPR1P16066 1061 aa11.89□□□□□ -0.51
SH3GLB1-201ENST00000370558 KIF23Q02241 960 aaPredicted RBP11.89□□□□□ -0.51
SH3GLB1-201ENST00000370558 ALCAMQ13740 583 aa11.89□□□□□ -0.51
SH3GLB1-201ENST00000370558 SZRD1Q7Z422 152 aa11.89□□□□□ -0.51
SH3GLB1-201ENST00000370558 THNSL1Q8IYQ7 743 aa11.89□□□□□ -0.51
SH3GLB1-201ENST00000370558 TCP11Q8WWU5 503 aa11.89□□□□□ -0.51
SH3GLB1-201ENST00000370558 ZNF341Q9BYN7 854 aa11.89□□□□□ -0.51
SH3GLB1-201ENST00000370558 SUDS3Q9H7L9 328 aaPredicted RBP11.89□□□□□ -0.51
SH3GLB1-201ENST00000370558 NRBP1Q9UHY1 535 aa11.89□□□□□ -0.51
SH3GLB1-201ENST00000370558 ZBBXA8MT70 800 aa11.89□□□□□ -0.51
SH3GLB1-201ENST00000370558 IKBKBO14920 756 aa11.89□□□□□ -0.51
SH3GLB1-201ENST00000370558 ESRRBO95718 433 aa11.89□□□□□ -0.51
SH3GLB1-201ENST00000370558 HABP4Q5JVS0 413 aaKnown RBP11.89□□□□□ -0.51
SH3GLB1-201ENST00000370558 RNF207Q6ZRF8 634 aa11.89□□□□□ -0.51
SH3GLB1-201ENST00000370558 VPS39Q96JC1 886 aa11.89□□□□□ -0.51
SH3GLB1-201ENST00000370558 NGRNQ9NPE2 291 aaKnown RBP11.89□□□□□ -0.51
SH3GLB1-201ENST00000370558 PCDHA13Q9Y5I0 950 aa11.89□□□□□ -0.51
SH3GLB1-201ENST00000370558 FAM135BQ49AJ0 1406 aa11.89□□□□□ -0.51
SH3GLB1-201ENST00000370558 MYOM2P54296 1465 aa11.89□□□□□ -0.51
SH3GLB1-201ENST00000370558 PNMA6FA0A0J9YX94 578 aa11.88□□□□□ -0.51
SH3GLB1-201ENST00000370558 IQANK1A0A1B0GTG1 560 aa11.88□□□□□ -0.51
SH3GLB1-201ENST00000370558 SH2B2O14492 632 aaPredicted RBP11.88□□□□□ -0.51
SH3GLB1-201ENST00000370558 PRPF3O43395 683 aaKnown RBP11.88□□□□□ -0.51
SH3GLB1-201ENST00000370558 TAC1P20366 129 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms