RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 NBPF9Q3BBW0 867 aa13.43□□□□□ -0.26
PHGDH-201ENST00000369407 GJB7Q6PEY0 223 aa13.43□□□□□ -0.26
PHGDH-201ENST00000369407 LRIG3Q6UXM1 1119 aa13.43□□□□□ -0.26
PHGDH-201ENST00000369407 RUFY4Q6ZNE9 571 aa13.43□□□□□ -0.26
PHGDH-201ENST00000369407 ZNF444Q8N0Y2 327 aaPredicted RBP13.43□□□□□ -0.26
PHGDH-201ENST00000369407 RAD54LQ92698 747 aa13.43□□□□□ -0.26
PHGDH-201ENST00000369407 ZMYND12Q9H0C1 365 aa13.43□□□□□ -0.26
PHGDH-201ENST00000369407 C6orf50Q9HD87 102 aa13.43□□□□□ -0.26
PHGDH-201ENST00000369407 ATP8A2Q9NTI2 1148 aa13.43□□□□□ -0.26
PHGDH-201ENST00000369407 CACNA1SQ13698 1873 aa13.43□□□□□ -0.26
PHGDH-201ENST00000369407 FRMPD2Q68DX3 1309 aaPredicted RBP13.43□□□□□ -0.26
PHGDH-201ENST00000369407 TOGARAM1Q9Y4F4 1720 aa13.43□□□□□ -0.26
PHGDH-201ENST00000369407 PAPPAQ13219 1627 aa13.43□□□□□ -0.26
PHGDH-201ENST00000369407 DRD4P21917 467 aa13.43□□□□□ -0.26
PHGDH-201ENST00000369407 GBP2P32456 591 aaPredicted RBP13.43□□□□□ -0.26
PHGDH-201ENST00000369407 PPP1R2P41236 205 aa13.43□□□□□ -0.26
PHGDH-201ENST00000369407 IFNAR2P48551 515 aa13.43□□□□□ -0.26
PHGDH-201ENST00000369407 TBC1D1Q86TI0 1168 aaPredicted RBP13.43□□□□□ -0.26
PHGDH-201ENST00000369407 DGKHQ86XP1 1220 aa13.43□□□□□ -0.26
PHGDH-201ENST00000369407 DZIP1Q86YF9 867 aaKnown RBP13.43□□□□□ -0.26
PHGDH-201ENST00000369407 MAPKAPK5Q8IW41 473 aa13.43□□□□□ -0.26
PHGDH-201ENST00000369407 DAGLBQ8NCG7 672 aa13.43□□□□□ -0.26
PHGDH-201ENST00000369407 STAMBPL1Q96FJ0 436 aa13.43□□□□□ -0.26
PHGDH-201ENST00000369407 THOC1Q96FV9 657 aaKnown RBP13.43□□□□□ -0.26
PHGDH-201ENST00000369407 ACSBG1Q96GR2 724 aa13.43□□□□□ -0.26
PHGDH-201ENST00000369407 PGRMC1O00264 195 aaKnown RBP13.42□□□□□ -0.26
PHGDH-201ENST00000369407 C21orf2O43822 256 aa13.42□□□□□ -0.26
PHGDH-201ENST00000369407 TNNI2P48788 182 aa13.42□□□□□ -0.26
PHGDH-201ENST00000369407 USP11P51784 963 aa13.42□□□□□ -0.26
PHGDH-201ENST00000369407 PEX26Q7Z412 305 aa13.42□□□□□ -0.26
PHGDH-201ENST00000369407 TMC3Q7Z5M5 1100 aa13.42□□□□□ -0.26
PHGDH-201ENST00000369407 REXO1Q8N1G1 1221 aaKnown RBP13.42□□□□□ -0.26
PHGDH-201ENST00000369407 TGFBRAP1Q8WUH2 860 aa13.42□□□□□ -0.26
PHGDH-201ENST00000369407 CCT6BQ92526 530 aa13.42□□□□□ -0.26
PHGDH-201ENST00000369407 SPAG5Q96R06 1193 aa13.42□□□□□ -0.26
PHGDH-201ENST00000369407 PANK4Q9NVE7 773 aa13.42□□□□□ -0.26
PHGDH-201ENST00000369407 NUP98P52948 1817 aa13.42□□□□□ -0.26
PHGDH-201ENST00000369407 ZNF142P52746 1687 aaPredicted RBP13.42□□□□□ -0.26
PHGDH-201ENST00000369407 PVALEFA0A1B0GWK0 134 aa13.42□□□□□ -0.26
PHGDH-201ENST00000369407 E9PMD0 336 aa13.42□□□□□ -0.26
PHGDH-201ENST00000369407 GCKP35557 465 aa13.42□□□□□ -0.26
PHGDH-201ENST00000369407 CUL1Q13616 776 aa13.42□□□□□ -0.26
PHGDH-201ENST00000369407 INTS5Q6P9B9 1019 aaKnown RBP13.42□□□□□ -0.26
PHGDH-201ENST00000369407 PSMD1Q99460 953 aa13.42□□□□□ -0.26
PHGDH-201ENST00000369407 TAF1P21675 1872 aa13.42□□□□□ -0.26
PHGDH-201ENST00000369407 PALM3A6NDB9 673 aaPredicted RBP13.42□□□□□ -0.26
PHGDH-201ENST00000369407 EIF4E1BA6NMX2 242 aaKnown RBP13.42□□□□□ -0.26
PHGDH-201ENST00000369407 MARCH6O60337 910 aa13.42□□□□□ -0.26
PHGDH-201ENST00000369407 CHN1P15882 459 aa13.42□□□□□ -0.26
PHGDH-201ENST00000369407 CRKLP46109 303 aaKnown RBP13.42□□□□□ -0.26
PHGDH-201ENST00000369407 SLCO1A2P46721 670 aa13.42□□□□□ -0.26
PHGDH-201ENST00000369407 GNAQP50148 359 aa13.42□□□□□ -0.26
PHGDH-201ENST00000369407 ELF3P78545 371 aaPredicted RBP13.42□□□□□ -0.26
PHGDH-201ENST00000369407 MKRN4PQ13434 485 aaPredicted RBP13.42□□□□□ -0.26
PHGDH-201ENST00000369407 UBE2SQ16763 222 aa13.42□□□□□ -0.26
PHGDH-201ENST00000369407 FAM26FQ5R3K3 315 aa13.42□□□□□ -0.26
PHGDH-201ENST00000369407 C12orf60Q5U649 245 aa13.42□□□□□ -0.26
PHGDH-201ENST00000369407 DAAM2Q86T65 1068 aa13.42□□□□□ -0.26
PHGDH-201ENST00000369407 CCDC113Q9H0I3 377 aa13.42□□□□□ -0.26
PHGDH-201ENST00000369407 NOD2Q9HC29 1040 aa13.42□□□□□ -0.26
PHGDH-201ENST00000369407 LRP5O75197 1615 aa13.41□□□□□ -0.26
PHGDH-201ENST00000369407 F8VZ95 297 aa13.41□□□□□ -0.26
PHGDH-201ENST00000369407 CAMTA2O94983 1202 aa13.41□□□□□ -0.26
PHGDH-201ENST00000369407 KCNH2Q12809 1159 aa13.41□□□□□ -0.26
PHGDH-201ENST00000369407 MYO1EQ12965 1108 aa13.41□□□□□ -0.26
PHGDH-201ENST00000369407 DRP2Q13474 957 aa13.41□□□□□ -0.26
PHGDH-201ENST00000369407 BIRC3Q13489 604 aa13.41□□□□□ -0.26
PHGDH-201ENST00000369407 GRIK5Q16478 980 aa13.41□□□□□ -0.26
PHGDH-201ENST00000369407 KRT79Q5XKE5 535 aa13.41□□□□□ -0.26
PHGDH-201ENST00000369407 ALKBH5Q6P6C2 394 aaKnown RBP13.41□□□□□ -0.26
PHGDH-201ENST00000369407 GLG1Q92896 1179 aa13.41□□□□□ -0.26
PHGDH-201ENST00000369407 XPO6Q96QU8 1125 aaKnown RBP13.41□□□□□ -0.26
PHGDH-201ENST00000369407 ELAC2Q9BQ52 826 aaKnown RBP13.41□□□□□ -0.26
PHGDH-201ENST00000369407 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.41□□□□□ -0.266e-10■■■■□ 22.4
PHGDH-201ENST00000369407 AJAP1Q9UKB5 411 aaPredicted RBP13.41□□□□□ -0.26
PHGDH-201ENST00000369407 ATP6V1G2O95670 118 aa13.41□□□□□ -0.26
PHGDH-201ENST00000369407 FGGP02679 453 aa13.41□□□□□ -0.26
PHGDH-201ENST00000369407 GCFC2P16383 781 aaKnown RBP13.41□□□□□ -0.26
PHGDH-201ENST00000369407 CALRP27797 417 aaKnown RBP13.41□□□□□ -0.26
PHGDH-201ENST00000369407 EIF6P56537 245 aaKnown RBP13.41□□□□□ -0.26
PHGDH-201ENST00000369407 KCNQ4P56696 695 aa13.41□□□□□ -0.26
PHGDH-201ENST00000369407 IFI35P80217 286 aaPredicted RBP13.41□□□□□ -0.26
PHGDH-201ENST00000369407 ZNF211Q13398 564 aaPredicted RBP13.41□□□□□ -0.26
PHGDH-201ENST00000369407 ADAM9Q13443 819 aa13.41□□□□□ -0.26
PHGDH-201ENST00000369407 UBE4AQ14139 1066 aa13.41□□□□□ -0.26
PHGDH-201ENST00000369407 HERC4Q5GLZ8 1057 aaPredicted RBP13.41□□□□□ -0.26
PHGDH-201ENST00000369407 DCAF17Q5H9S7 520 aaPredicted RBP13.41□□□□□ -0.26
PHGDH-201ENST00000369407 CHMP6Q96FZ7 201 aa13.41□□□□□ -0.26
PHGDH-201ENST00000369407 NLRP3Q96P20 1036 aa13.41□□□□□ -0.26
PHGDH-201ENST00000369407 SEC63Q9UGP8 760 aaKnown RBP13.41□□□□□ -0.26
PHGDH-201ENST00000369407 GGA2Q9UJY4 613 aa13.41□□□□□ -0.26
PHGDH-201ENST00000369407 CD2APQ9Y5K6 639 aa13.41□□□□□ -0.26
PHGDH-201ENST00000369407 EDIL3O43854 480 aa13.4□□□□□ -0.26
PHGDH-201ENST00000369407 TRIM37O94972 964 aa13.4□□□□□ -0.26
PHGDH-201ENST00000369407 CCDC38Q502W7 563 aa13.4□□□□□ -0.26
PHGDH-201ENST00000369407 ZCWPW2Q504Y3 356 aa13.4□□□□□ -0.26
PHGDH-201ENST00000369407 BRINP3Q76B58 766 aa13.4□□□□□ -0.26
PHGDH-201ENST00000369407 LRRC57Q8N9N7 239 aa13.4□□□□□ -0.26
PHGDH-201ENST00000369407 MARCH10Q8NA82 808 aaPredicted RBP13.4□□□□□ -0.26
PHGDH-201ENST00000369407 DNAJC19Q96DA6 116 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms