RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.69■□□□□ 0.1
HMGCS2-201ENST00000369406 EEPD1Q7L9B9 569 aa15.69■□□□□ 0.1
HMGCS2-201ENST00000369406 CCDC186Q7Z3E2 898 aa15.69■□□□□ 0.1
HMGCS2-201ENST00000369406 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.69■□□□□ 0.1
HMGCS2-201ENST00000369406 TBC1D22BQ9NU19 505 aa15.69■□□□□ 0.1
HMGCS2-201ENST00000369406 SFI1A8K8P3 1242 aa15.69■□□□□ 0.1
HMGCS2-201ENST00000369406 SLC25A27O95847 323 aa15.69■□□□□ 0.1
HMGCS2-201ENST00000369406 LRMPQ12912 555 aa15.69■□□□□ 0.1
HMGCS2-201ENST00000369406 TRMT1LQ7Z2T5 733 aaKnown RBP15.69■□□□□ 0.1
HMGCS2-201ENST00000369406 ANKRD23Q86SG2 305 aa15.69■□□□□ 0.1
HMGCS2-201ENST00000369406 SMCR8Q8TEV9 937 aaPredicted RBP15.69■□□□□ 0.1
HMGCS2-201ENST00000369406 SAMM50Q9Y512 469 aa15.69■□□□□ 0.1
HMGCS2-201ENST00000369406 PASKQ96RG2 1323 aa15.68■□□□□ 0.1
HMGCS2-201ENST00000369406 IGF2BP3O00425 579 aaKnown RBP eCLIP15.68■□□□□ 0.1
HMGCS2-201ENST00000369406 SERPINC1P01008 464 aa15.68■□□□□ 0.1
HMGCS2-201ENST00000369406 ZBTB48P10074 688 aaPredicted RBP15.68■□□□□ 0.1
HMGCS2-201ENST00000369406 UBASH3AP57075 661 aa15.68■□□□□ 0.1
HMGCS2-201ENST00000369406 TPM4P67936 248 aa15.68■□□□□ 0.1
HMGCS2-201ENST00000369406 SFR1Q86XK3 245 aa15.68■□□□□ 0.1
HMGCS2-201ENST00000369406 DRC7Q8IY82 874 aa15.68■□□□□ 0.1
HMGCS2-201ENST00000369406 P2RX5Q93086 422 aa15.68■□□□□ 0.1
HMGCS2-201ENST00000369406 IWS1Q96ST2 819 aa15.68■□□□□ 0.1
HMGCS2-201ENST00000369406 MMP19Q99542 508 aa15.68■□□□□ 0.1
HMGCS2-201ENST00000369406 TEX33O43247 280 aa15.68■□□□□ 0.1
HMGCS2-201ENST00000369406 HOXD13P35453 343 aa15.68■□□□□ 0.1
HMGCS2-201ENST00000369406 STXBP2Q15833 593 aa15.68■□□□□ 0.1
HMGCS2-201ENST00000369406 COBLL1Q53SF7 1204 aa15.68■□□□□ 0.1
HMGCS2-201ENST00000369406 FAM26FQ5R3K3 315 aa15.68■□□□□ 0.1
HMGCS2-201ENST00000369406 NLRX1Q86UT6 975 aa15.68■□□□□ 0.1
HMGCS2-201ENST00000369406 IKZF4Q9H2S9 585 aa15.68■□□□□ 0.1
HMGCS2-201ENST00000369406 ZHX3Q9H4I2 956 aa15.68■□□□□ 0.1
HMGCS2-201ENST00000369406 STK24Q9Y6E0 443 aa15.68■□□□□ 0.1
HMGCS2-201ENST00000369406 ZSWIM8A7E2V4 1837 aa15.67■□□□□ 0.1
HMGCS2-201ENST00000369406 ZNF862O60290 1169 aa15.67■□□□□ 0.1
HMGCS2-201ENST00000369406 EIF3JO75822 258 aaKnown RBP15.67■□□□□ 0.1
HMGCS2-201ENST00000369406 ARIH2O95376 493 aa15.67■□□□□ 0.1
HMGCS2-201ENST00000369406 KRT18P05783 430 aaKnown RBP15.67■□□□□ 0.1
HMGCS2-201ENST00000369406 P4HBP07237 508 aaKnown RBP15.67■□□□□ 0.1
HMGCS2-201ENST00000369406 CCNE1P24864 410 aa15.67■□□□□ 0.1
HMGCS2-201ENST00000369406 HERC4Q5GLZ8 1057 aaPredicted RBP15.67■□□□□ 0.1
HMGCS2-201ENST00000369406 PLA2G4FQ68DD2 849 aa15.67■□□□□ 0.1
HMGCS2-201ENST00000369406 DHTKD1Q96HY7 919 aaPredicted RBP15.67■□□□□ 0.1
HMGCS2-201ENST00000369406 MAF1Q9H063 256 aa15.67■□□□□ 0.1
HMGCS2-201ENST00000369406 PNMA3Q9UL41 463 aa15.67■□□□□ 0.1
HMGCS2-201ENST00000369406 SLC45A1Q9Y2W3 748 aa15.67■□□□□ 0.1
HMGCS2-201ENST00000369406 PSMA7O14818 248 aa15.67■□□□□ 0.1
HMGCS2-201ENST00000369406 ECM2O94769 699 aaPredicted RBP15.67■□□□□ 0.1
HMGCS2-201ENST00000369406 STBD1O95210 358 aa15.67■□□□□ 0.1
HMGCS2-201ENST00000369406 GOLGA8FQ08AF8 430 aa15.67■□□□□ 0.1
HMGCS2-201ENST00000369406 GOLGA8DPQ0D2H9 430 aa15.67■□□□□ 0.1
HMGCS2-201ENST00000369406 KRT31Q15323 416 aa15.67■□□□□ 0.1
HMGCS2-201ENST00000369406 UTP14CQ5TAP6 766 aaKnown RBP15.67■□□□□ 0.1
HMGCS2-201ENST00000369406 TMC6Q7Z403 805 aa15.67■□□□□ 0.1
HMGCS2-201ENST00000369406 FILIP1Q7Z7B0 1213 aa15.67■□□□□ 0.1
HMGCS2-201ENST00000369406 SAPCD2Q86UD0 394 aa15.67■□□□□ 0.1
HMGCS2-201ENST00000369406 DAW1Q8N136 415 aa15.67■□□□□ 0.1
HMGCS2-201ENST00000369406 GPRC5AQ8NFJ5 357 aa15.67■□□□□ 0.1
HMGCS2-201ENST00000369406 SCFD1Q8WVM8 642 aa15.67■□□□□ 0.1
HMGCS2-201ENST00000369406 NACC1Q96RE7 527 aa15.67■□□□□ 0.1
HMGCS2-201ENST00000369406 LRRC27Q9C0I9 530 aa15.67■□□□□ 0.1
HMGCS2-201ENST00000369406 BMP2KQ9NSY1 1161 aaPredicted RBP15.67■□□□□ 0.1
HMGCS2-201ENST00000369406 WDR64B1ANS9 1081 aa15.66■□□□□ 0.1
HMGCS2-201ENST00000369406 MYBP10242 640 aa15.66■□□□□ 0.1
HMGCS2-201ENST00000369406 CDK11BP21127 795 aaKnown RBP15.66■□□□□ 0.1
HMGCS2-201ENST00000369406 UBA1P22314 1058 aaKnown RBP15.66■□□□□ 0.1
HMGCS2-201ENST00000369406 ICAM3P32942 547 aa15.66■□□□□ 0.1
HMGCS2-201ENST00000369406 QARSP47897 775 aaKnown RBP15.66■□□□□ 0.1
HMGCS2-201ENST00000369406 KRT76Q01546 638 aa15.66■□□□□ 0.1
HMGCS2-201ENST00000369406 MAPK7Q13164 816 aa15.66■□□□□ 0.1
HMGCS2-201ENST00000369406 HS1BP3Q53T59 392 aa15.66■□□□□ 0.1
HMGCS2-201ENST00000369406 CENPPQ6IPU0 288 aa15.66■□□□□ 0.1
HMGCS2-201ENST00000369406 CYFIP1Q7L576 1253 aa15.66■□□□□ 0.1
HMGCS2-201ENST00000369406 CCDC60Q8IWA6 550 aaPredicted RBP15.66■□□□□ 0.1
HMGCS2-201ENST00000369406 CACTINQ8WUQ7 758 aaKnown RBP15.66■□□□□ 0.1
HMGCS2-201ENST00000369406 TRIM47Q96LD4 638 aa15.66■□□□□ 0.1
HMGCS2-201ENST00000369406 SRRTQ9BXP5 876 aaKnown RBP15.66■□□□□ 0.1
HMGCS2-201ENST00000369406 JPH1Q9HDC5 661 aaPredicted RBP15.66■□□□□ 0.1
HMGCS2-201ENST00000369406 A0A1B0GTH6 734 aa15.66■□□□□ 0.1
HMGCS2-201ENST00000369406 BACH1O14867 736 aa15.66■□□□□ 0.1
HMGCS2-201ENST00000369406 ZNF157P51786 506 aaPredicted RBP15.66■□□□□ 0.1
HMGCS2-201ENST00000369406 ACTR2P61160 394 aa15.66■□□□□ 0.1
HMGCS2-201ENST00000369406 ZNF746Q6NUN9 644 aaPredicted RBP15.66■□□□□ 0.1
HMGCS2-201ENST00000369406 NELFCDQ8IXH7 590 aa15.66■□□□□ 0.1
HMGCS2-201ENST00000369406 CCDC65Q8IXS2 484 aa15.66■□□□□ 0.1
HMGCS2-201ENST00000369406 C17orf53Q8N3J3 647 aaPredicted RBP15.66■□□□□ 0.1
HMGCS2-201ENST00000369406 GUF1Q8N442 669 aaKnown RBP15.66■□□□□ 0.1
HMGCS2-201ENST00000369406 CCDC47Q96A33 483 aaKnown RBP15.66■□□□□ 0.1
HMGCS2-201ENST00000369406 FIZ1Q96SL8 496 aa15.66■□□□□ 0.1
HMGCS2-201ENST00000369406 ZIC5Q96T25 663 aa15.66■□□□□ 0.1
HMGCS2-201ENST00000369406 SENP7Q9BQF6 1050 aa15.66■□□□□ 0.1
HMGCS2-201ENST00000369406 MROH8Q9H579 483 aa15.66■□□□□ 0.1
HMGCS2-201ENST00000369406 ZSWIM4Q9H7M6 989 aa15.66■□□□□ 0.1
HMGCS2-201ENST00000369406 TAB2Q9NYJ8 693 aa15.66■□□□□ 0.1
HMGCS2-201ENST00000369406 ADD3Q9UEY8 706 aaKnown RBP15.66■□□□□ 0.1
HMGCS2-201ENST00000369406 NFASCO94856 1347 aa15.65■□□□□ 0.1
HMGCS2-201ENST00000369406 ESPNB1AK53 854 aa15.65■□□□□ 0.1
HMGCS2-201ENST00000369406 KCNJ18B7U540 433 aa15.65■□□□□ 0.1
HMGCS2-201ENST00000369406 NPEPPSP55786 919 aa15.65■□□□□ 0.1
HMGCS2-201ENST00000369406 KCNA1Q09470 495 aa15.65■□□□□ 0.1
HMGCS2-201ENST00000369406 KCNJ12Q14500 433 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms