RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 SP100P23497 879 aaPredicted RBP11.23□□□□□ -0.61
PRDM1-201ENST00000369089 HSPA1LP34931 641 aa11.23□□□□□ -0.61
PRDM1-201ENST00000369089 EHHADHQ08426 723 aa11.23□□□□□ -0.61
PRDM1-201ENST00000369089 AP1B1Q10567 949 aa11.23□□□□□ -0.61
PRDM1-201ENST00000369089 TBC1D25Q3MII6 688 aa11.23□□□□□ -0.61
PRDM1-201ENST00000369089 ZNF394Q53GI3 561 aa11.23□□□□□ -0.61
PRDM1-201ENST00000369089 LRGUKQ96M69 825 aa11.23□□□□□ -0.61
PRDM1-201ENST00000369089 ASCC2Q9H1I8 757 aaPredicted RBP11.23□□□□□ -0.61
PRDM1-201ENST00000369089 RNPEPL1Q9HAU8 725 aa11.23□□□□□ -0.61
PRDM1-201ENST00000369089 SNRKQ9NRH2 765 aa11.23□□□□□ -0.61
PRDM1-201ENST00000369089 HBS1LQ9Y450 684 aaKnown RBP11.23□□□□□ -0.61
PRDM1-201ENST00000369089 CFAP74Q9C0B2 1584 aa11.22□□□□□ -0.61
PRDM1-201ENST00000369089 ORC4O43929 436 aa11.22□□□□□ -0.61
PRDM1-201ENST00000369089 MGRN1O60291 552 aa11.22□□□□□ -0.61
PRDM1-201ENST00000369089 UBOX5O94941 541 aa11.22□□□□□ -0.61
PRDM1-201ENST00000369089 ZNF827Q17R98 1081 aa11.22□□□□□ -0.61
PRDM1-201ENST00000369089 RSPH3Q86UC2 560 aa11.22□□□□□ -0.61
PRDM1-201ENST00000369089 MMGT1Q8N4V1 131 aa11.22□□□□□ -0.61
PRDM1-201ENST00000369089 RBM46Q8TBY0 533 aaKnown RBP11.22□□□□□ -0.61
PRDM1-201ENST00000369089 UBXN6Q9BZV1 441 aa11.22□□□□□ -0.61
PRDM1-201ENST00000369089 CDC42BPAQ5VT25 1732 aa11.22□□□□□ -0.61
PRDM1-201ENST00000369089 METP08581 1390 aa11.22□□□□□ -0.61
PRDM1-201ENST00000369089 LGR5O75473 907 aa11.22□□□□□ -0.61
PRDM1-201ENST00000369089 HAUS5O94927 633 aa11.22□□□□□ -0.61
PRDM1-201ENST00000369089 ZBED6P86452 979 aa11.22□□□□□ -0.61
PRDM1-201ENST00000369089 ADRM1Q16186 407 aa11.22□□□□□ -0.61
PRDM1-201ENST00000369089 LMBR1LQ6UX01 489 aa11.22□□□□□ -0.61
PRDM1-201ENST00000369089 TMTC3Q6ZXV5 915 aa11.22□□□□□ -0.61
PRDM1-201ENST00000369089 CCDC84Q86UT8 332 aaPredicted RBP11.22□□□□□ -0.61
PRDM1-201ENST00000369089 ACSBG1Q96GR2 724 aa11.22□□□□□ -0.61
PRDM1-201ENST00000369089 DCAF5Q96JK2 942 aa11.22□□□□□ -0.61
PRDM1-201ENST00000369089 FAM161BQ96MY7 647 aa11.22□□□□□ -0.61
PRDM1-201ENST00000369089 CCDC28BQ9BUN5 200 aa11.22□□□□□ -0.61
PRDM1-201ENST00000369089 SLC26A6Q9BXS9 759 aa11.22□□□□□ -0.61
PRDM1-201ENST00000369089 SEPT3Q9UH03 358 aa11.22□□□□□ -0.61
PRDM1-201ENST00000369089 SLC12A7Q9Y666 1083 aa11.22□□□□□ -0.61
PRDM1-201ENST00000369089 SMIM31A0A1B0GVY4 71 aa11.22□□□□□ -0.61
PRDM1-201ENST00000369089 RSPH10B2B2RC85 870 aa11.22□□□□□ -0.61
PRDM1-201ENST00000369089 RSPH10BP0C881 870 aa11.22□□□□□ -0.61
PRDM1-201ENST00000369089 PPP1R2P41236 205 aa11.22□□□□□ -0.61
PRDM1-201ENST00000369089 ST13P50502 369 aaKnown RBP11.22□□□□□ -0.61
PRDM1-201ENST00000369089 WASHC2DQ5SRD0 308 aa11.22□□□□□ -0.61
PRDM1-201ENST00000369089 CNKSR1Q969H4 720 aa11.22□□□□□ -0.61
PRDM1-201ENST00000369089 ASIC3Q9UHC3 531 aa11.22□□□□□ -0.61
PRDM1-201ENST00000369089 PACSIN2Q9UNF0 486 aaPredicted RBP11.22□□□□□ -0.61
PRDM1-201ENST00000369089 CTDP1Q9Y5B0 961 aaPredicted RBP11.22□□□□□ -0.61
PRDM1-201ENST00000369089 AP3B1O00203 1094 aa11.21□□□□□ -0.61
PRDM1-201ENST00000369089 CAPN9O14815 690 aa11.21□□□□□ -0.61
PRDM1-201ENST00000369089 IL2RBP14784 551 aa11.21□□□□□ -0.61
PRDM1-201ENST00000369089 NUP107P57740 925 aa11.21□□□□□ -0.61
PRDM1-201ENST00000369089 CEP55Q53EZ4 464 aa11.21□□□□□ -0.61
PRDM1-201ENST00000369089 KAZNQ674X7 775 aa11.21□□□□□ -0.61
PRDM1-201ENST00000369089 LMBRD2Q68DH5 695 aaPredicted RBP11.21□□□□□ -0.61
PRDM1-201ENST00000369089 NELFBQ8WX92 580 aa11.21□□□□□ -0.61
PRDM1-201ENST00000369089 PRMT1Q99873 361 aaKnown RBP11.21□□□□□ -0.61
PRDM1-201ENST00000369089 SERTAD1Q9UHV2 236 aa11.21□□□□□ -0.61
PRDM1-201ENST00000369089 PA2G4Q9UQ80 394 aaKnown RBP11.21□□□□□ -0.61
PRDM1-201ENST00000369089 PRDM15P57071 1507 aaPredicted RBP11.21□□□□□ -0.61
PRDM1-201ENST00000369089 KIF24Q5T7B8 1368 aa11.21□□□□□ -0.61
PRDM1-201ENST00000369089 TCP11X1B4DZS4 312 aa11.21□□□□□ -0.61
PRDM1-201ENST00000369089 CDCA2Q69YH5 1023 aaPredicted RBP11.21□□□□□ -0.61
PRDM1-201ENST00000369089 MRPL46Q9H2W6 279 aaKnown RBP11.21□□□□□ -0.61
PRDM1-201ENST00000369089 SAMSN1Q9NSI8 373 aaKnown RBP11.21□□□□□ -0.61
PRDM1-201ENST00000369089 PLXNC1O60486 1568 aa11.21□□□□□ -0.61
PRDM1-201ENST00000369089 TBKBP1A7MCY6 615 aa11.21□□□□□ -0.62
PRDM1-201ENST00000369089 PGRMC1O00264 195 aaKnown RBP11.21□□□□□ -0.62
PRDM1-201ENST00000369089 DEAF1O75398 565 aaPredicted RBP11.21□□□□□ -0.62
PRDM1-201ENST00000369089 MOCS3O95396 460 aa11.21□□□□□ -0.62
PRDM1-201ENST00000369089 MORC3Q14149 939 aa11.21□□□□□ -0.62
PRDM1-201ENST00000369089 SNX30Q5VWJ9 437 aa11.21□□□□□ -0.62
PRDM1-201ENST00000369089 CSGALNACT2Q8N6G5 542 aa11.21□□□□□ -0.62
PRDM1-201ENST00000369089 DQX1Q8TE96 717 aaKnown RBP11.21□□□□□ -0.62
PRDM1-201ENST00000369089 TGS1Q96RS0 853 aaKnown RBP11.21□□□□□ -0.62
PRDM1-201ENST00000369089 ABHD10Q9NUJ1 306 aa11.21□□□□□ -0.62
PRDM1-201ENST00000369089 ABCF3Q9NUQ8 709 aa11.21□□□□□ -0.62
PRDM1-201ENST00000369089 CTNNAL1Q9UBT7 734 aa11.21□□□□□ -0.62
PRDM1-201ENST00000369089 LRWD1Q9UFC0 647 aa11.21□□□□□ -0.62
PRDM1-201ENST00000369089 RABGEF1Q9UJ41 708 aa11.21□□□□□ -0.62
PRDM1-201ENST00000369089 MKL2Q9ULH7 1088 aa11.21□□□□□ -0.62
PRDM1-201ENST00000369089 KDM5AP29375 1690 aaKnown RBP11.21□□□□□ -0.62
PRDM1-201ENST00000369089 WDR91A4D1P6 747 aa11.21□□□□□ -0.62
PRDM1-201ENST00000369089 CCDC22O60826 627 aa11.21□□□□□ -0.62
PRDM1-201ENST00000369089 SERPINB1P30740 379 aa11.21□□□□□ -0.62
PRDM1-201ENST00000369089 MCM7P33993 719 aa11.21□□□□□ -0.62
PRDM1-201ENST00000369089 BTKQ06187 659 aa11.21□□□□□ -0.62
PRDM1-201ENST00000369089 SCUBE1Q8IWY4 988 aa11.21□□□□□ -0.62
PRDM1-201ENST00000369089 CCDC105Q8IYK2 499 aa11.21□□□□□ -0.62
PRDM1-201ENST00000369089 DPF2Q92785 391 aa11.21□□□□□ -0.62
PRDM1-201ENST00000369089 ANKRD36BP1Q96IX9 119 aa11.21□□□□□ -0.62
PRDM1-201ENST00000369089 CAAP1Q9H8G2 361 aa11.21□□□□□ -0.62
PRDM1-201ENST00000369089 LGR6Q9HBX8 967 aa11.21□□□□□ -0.62
PRDM1-201ENST00000369089 PRM3Q9NNZ6 103 aa11.21□□□□□ -0.62
PRDM1-201ENST00000369089 BABAM1Q9NWV8 329 aa11.21□□□□□ -0.62
PRDM1-201ENST00000369089 ARHGEF38Q9NXL2 777 aa11.21□□□□□ -0.62
PRDM1-201ENST00000369089 RTN2O75298 545 aa11.2□□□□□ -0.62
PRDM1-201ENST00000369089 LARGE1O95461 756 aa11.2□□□□□ -0.62
PRDM1-201ENST00000369089 CLPTM1O96005 669 aa11.2□□□□□ -0.62
PRDM1-201ENST00000369089 KRT3P12035 628 aa11.2□□□□□ -0.62
PRDM1-201ENST00000369089 RAPGEF1Q13905 1077 aa11.2□□□□□ -0.62
PRDM1-201ENST00000369089 CAVIN4Q5BKX8 364 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms