RNA–Protein interactions for RNA: ENST00000368843.7

SNX27-203, Transcript of sorting nexin family member 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX27, Length 7,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-203ENST00000368843 PKP1Q13835 747 aa19.35■□□□□ 0.69
SNX27-203ENST00000368843 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.35■□□□□ 0.69
SNX27-203ENST00000368843 CAPS2Q9BXY5 557 aa19.35■□□□□ 0.69
SNX27-203ENST00000368843 ANKARQ7Z5J8 1434 aa19.35■□□□□ 0.69
SNX27-203ENST00000368843 MOCS3O95396 460 aa19.35■□□□□ 0.69
SNX27-203ENST00000368843 GBP5Q96PP8 586 aa19.35■□□□□ 0.69
SNX27-203ENST00000368843 PIH1D3Q9NQM4 214 aaKnown RBP19.35■□□□□ 0.69
SNX27-203ENST00000368843 GOLGA8QA0A0J9YX86 632 aa19.35■□□□□ 0.69
SNX27-203ENST00000368843 GOLGA8OA6NCC3 632 aa19.35■□□□□ 0.69
SNX27-203ENST00000368843 GOLGA8NF8WBI6 632 aa19.35■□□□□ 0.69
SNX27-203ENST00000368843 IFNAR2P48551 515 aa19.35■□□□□ 0.69
SNX27-203ENST00000368843 SLC27A3Q5K4L6 730 aa19.35■□□□□ 0.69
SNX27-203ENST00000368843 PCDHA5Q9Y5H7 936 aa19.35■□□□□ 0.69
SNX27-203ENST00000368843 SASH1O94885 1247 aa19.34■□□□□ 0.69
SNX27-203ENST00000368843 PHLDB3Q6NSJ2 640 aa19.34■□□□□ 0.69
SNX27-203ENST00000368843 EXT2Q93063 718 aa19.34■□□□□ 0.69
SNX27-203ENST00000368843 FGD4Q96M96 766 aa19.34■□□□□ 0.69
SNX27-203ENST00000368843 IL9RQ01113 521 aa19.34■□□□□ 0.69
SNX27-203ENST00000368843 C2orf54Q08AI8 447 aa19.34■□□□□ 0.69
SNX27-203ENST00000368843 MMTAG2Q9BU76 263 aaKnown RBP19.34■□□□□ 0.69
SNX27-203ENST00000368843 ECEL1O95672 775 aa19.34■□□□□ 0.69
SNX27-203ENST00000368843 CXCR5P32302 372 aa19.34■□□□□ 0.69
SNX27-203ENST00000368843 MXI1P50539 228 aa19.34■□□□□ 0.69
SNX27-203ENST00000368843 TMEM179Q6ZVK1 233 aa19.34■□□□□ 0.69
SNX27-203ENST00000368843 ZBBXA8MT70 800 aa19.34■□□□□ 0.69
SNX27-203ENST00000368843 RPSAP08865 295 aaKnown RBP19.34■□□□□ 0.69
SNX27-203ENST00000368843 MTMR1Q13613 665 aa19.34■□□□□ 0.69
SNX27-203ENST00000368843 SPOPLQ6IQ16 392 aa19.34■□□□□ 0.69
SNX27-203ENST00000368843 NUDCD1Q96RS6 583 aa19.34■□□□□ 0.69
SNX27-203ENST00000368843 SPZ1Q9BXG8 430 aa19.34■□□□□ 0.69
SNX27-203ENST00000368843 NSUN7Q8NE18 718 aaKnown RBP19.34■□□□□ 0.69
SNX27-203ENST00000368843 ANLNQ9NQW6 1124 aa19.34■□□□□ 0.69
SNX27-203ENST00000368843 CLTAP09496 248 aa19.34■□□□□ 0.69
SNX27-203ENST00000368843 URGCPQ8TCY9 931 aa19.34■□□□□ 0.69
SNX27-203ENST00000368843 SLC35F6Q8N357 371 aa19.33■□□□□ 0.69
SNX27-203ENST00000368843 MORC4Q8TE76 937 aa19.33■□□□□ 0.69
SNX27-203ENST00000368843 OSBP2Q969R2 916 aa19.33■□□□□ 0.69
SNX27-203ENST00000368843 GDAQ9Y2T3 454 aa19.33■□□□□ 0.69
SNX27-203ENST00000368843 TOM1L1O75674 476 aa19.33■□□□□ 0.69
SNX27-203ENST00000368843 LIG3P49916 1009 aa19.33■□□□□ 0.69
SNX27-203ENST00000368843 PIGOQ8TEQ8 1089 aa19.33■□□□□ 0.69
SNX27-203ENST00000368843 ABCB11O95342 1321 aa19.33■□□□□ 0.68
SNX27-203ENST00000368843 PRPF3O43395 683 aaKnown RBP19.33■□□□□ 0.68
SNX27-203ENST00000368843 ASNSP08243 561 aa19.33■□□□□ 0.68
SNX27-203ENST00000368843 RASGRF1Q13972 1273 aa19.33■□□□□ 0.68
SNX27-203ENST00000368843 FOXP4Q8IVH2 680 aaPredicted RBP19.33■□□□□ 0.68
SNX27-203ENST00000368843 SCN4BQ8IWT1 228 aa19.33■□□□□ 0.68
SNX27-203ENST00000368843 THNSL1Q8IYQ7 743 aa19.33■□□□□ 0.68
SNX27-203ENST00000368843 PLEKHF1Q96S99 279 aa19.33■□□□□ 0.68
SNX27-203ENST00000368843 Q9H521 79 aa19.33■□□□□ 0.68
SNX27-203ENST00000368843 RNF181Q9P0P0 153 aa19.33■□□□□ 0.68
SNX27-203ENST00000368843 FTCDO95954 541 aa19.33■□□□□ 0.68
SNX27-203ENST00000368843 FKBP3Q00688 224 aaKnown RBP19.33■□□□□ 0.68
SNX27-203ENST00000368843 STXBP2Q15833 593 aa19.33■□□□□ 0.68
SNX27-203ENST00000368843 PPP1R2P3Q6NXS1 205 aa19.33■□□□□ 0.68
SNX27-203ENST00000368843 CDC42BPGQ6DT37 1551 aa19.33■□□□□ 0.68
SNX27-203ENST00000368843 TWF2Q6IBS0 349 aaKnown RBP19.32■□□□□ 0.68
SNX27-203ENST00000368843 LCA5Q86VQ0 697 aa19.32■□□□□ 0.68
SNX27-203ENST00000368843 GPT2Q8TD30 523 aa19.32■□□□□ 0.68
SNX27-203ENST00000368843 DCAF4Q8WV16 495 aa19.32■□□□□ 0.68
SNX27-203ENST00000368843 TDRD3Q9H7E2 651 aaKnown RBP19.32■□□□□ 0.68
SNX27-203ENST00000368843 XAB2Q9HCS7 855 aaKnown RBP19.32■□□□□ 0.68
SNX27-203ENST00000368843 RNF123Q5XPI4 1314 aa19.32■□□□□ 0.68
SNX27-203ENST00000368843 LRRD1A4D1F6 860 aa19.32■□□□□ 0.68
SNX27-203ENST00000368843 DAAM1Q9Y4D1 1078 aa19.32■□□□□ 0.68
SNX27-203ENST00000368843 PEX19P40855 299 aa19.32■□□□□ 0.68
SNX27-203ENST00000368843 DPYSL4O14531 572 aa19.32■□□□□ 0.68
SNX27-203ENST00000368843 SKIV2LQ15477 1246 aaKnown RBP19.32■□□□□ 0.68
SNX27-203ENST00000368843 TTC25Q96NG3 672 aa19.32■□□□□ 0.68
SNX27-203ENST00000368843 TBK1Q9UHD2 729 aa19.32■□□□□ 0.68
SNX27-203ENST00000368843 INTUQ9ULD6 942 aa19.32■□□□□ 0.68
SNX27-203ENST00000368843 ORC6Q9Y5N6 252 aa19.32■□□□□ 0.68
SNX27-203ENST00000368843 EVI5O60447 810 aa19.32■□□□□ 0.68
SNX27-203ENST00000368843 PSMA2P25787 234 aa19.32■□□□□ 0.68
SNX27-203ENST00000368843 PRDM5Q9NQX1 630 aaPredicted RBP19.32■□□□□ 0.68
SNX27-203ENST00000368843 PCDHA6Q9UN73 950 aa19.32■□□□□ 0.68
SNX27-203ENST00000368843 PCDHA8Q9Y5H6 950 aa19.32■□□□□ 0.68
SNX27-203ENST00000368843 PLTPP55058 493 aa19.32■□□□□ 0.68
SNX27-203ENST00000368843 NDUFAF2Q8N183 169 aa19.32■□□□□ 0.68
SNX27-203ENST00000368843 PPP1R13BQ96KQ4 1090 aa19.32■□□□□ 0.68
SNX27-203ENST00000368843 MMP19Q99542 508 aa19.32■□□□□ 0.68
SNX27-203ENST00000368843 ATP7BP35670 1465 aa19.32■□□□□ 0.68
SNX27-203ENST00000368843 SLFN12LQ6IEE8 588 aa19.31■□□□□ 0.68
SNX27-203ENST00000368843 ZNF335Q9H4Z2 1342 aaPredicted RBP19.31■□□□□ 0.68
SNX27-203ENST00000368843 USP6P35125 1406 aa19.31■□□□□ 0.68
SNX27-203ENST00000368843 HOXC10Q9NYD6 342 aa19.31■□□□□ 0.68
SNX27-203ENST00000368843 ATP8A1Q9Y2Q0 1164 aa19.31■□□□□ 0.68
SNX27-203ENST00000368843 JAK3P52333 1124 aa19.31■□□□□ 0.68
SNX27-203ENST00000368843 NSUN2Q08J23 767 aaKnown RBP eCLIP19.31■□□□□ 0.68
SNX27-203ENST00000368843 SNRNP48Q6IEG0 339 aaKnown RBP19.31■□□□□ 0.68
SNX27-203ENST00000368843 FASTKD5Q7L8L6 764 aaKnown RBP19.31■□□□□ 0.68
SNX27-203ENST00000368843 ERICH1Q86X53 443 aa19.31■□□□□ 0.68
SNX27-203ENST00000368843 RASEFQ8IZ41 740 aa19.31■□□□□ 0.68
SNX27-203ENST00000368843 ATG3Q9NT62 314 aa19.31■□□□□ 0.68
SNX27-203ENST00000368843 F8W8V4 182 aa19.31■□□□□ 0.68
SNX27-203ENST00000368843 PLEKHA8P1O95397 391 aa19.31■□□□□ 0.68
SNX27-203ENST00000368843 YWHAHQ04917 246 aaPredicted RBP19.31■□□□□ 0.68
SNX27-203ENST00000368843 ZBTB41Q5SVQ8 909 aa19.31■□□□□ 0.68
SNX27-203ENST00000368843 ANGPTL8Q6UXH0 198 aa19.31■□□□□ 0.68
SNX27-203ENST00000368843 TMTC3Q6ZXV5 915 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms