RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 SYN2Q92777 582 aaPredicted RBP15.48■□□□□ 0.07
USF1-202ENST00000368020 SLC5A5Q92911 643 aa15.48■□□□□ 0.07
USF1-202ENST00000368020 GJA10Q969M2 543 aa15.48■□□□□ 0.07
USF1-202ENST00000368020 CCDC42Q96M95 316 aa15.48■□□□□ 0.07
USF1-202ENST00000368020 P2RX7Q99572 595 aaKnown RBP15.48■□□□□ 0.07
USF1-202ENST00000368020 EIF2AK1Q9BQI3 630 aaKnown RBP15.48■□□□□ 0.07
USF1-202ENST00000368020 NHEJ1Q9H9Q4 299 aaPredicted RBP15.48■□□□□ 0.07
USF1-202ENST00000368020 AGPAT5Q9NUQ2 364 aa15.48■□□□□ 0.07
USF1-202ENST00000368020 TRAF3IP3Q9Y228 551 aa15.48■□□□□ 0.07
USF1-202ENST00000368020 CALUO43852 315 aaPredicted RBP15.47■□□□□ 0.07
USF1-202ENST00000368020 ICAM1P05362 532 aa15.47■□□□□ 0.07
USF1-202ENST00000368020 RPL13P26373 211 aaKnown RBP15.47■□□□□ 0.07
USF1-202ENST00000368020 INPP5BP32019 993 aa15.47■□□□□ 0.07
USF1-202ENST00000368020 FKBP1BP68106 108 aa15.47■□□□□ 0.07
USF1-202ENST00000368020 GIT2Q14161 759 aa15.47■□□□□ 0.07
USF1-202ENST00000368020 CEP55Q53EZ4 464 aa15.47■□□□□ 0.07
USF1-202ENST00000368020 FBXO38Q6PIJ6 1188 aa15.47■□□□□ 0.07
USF1-202ENST00000368020 STXBP4Q6ZWJ1 553 aa15.47■□□□□ 0.07
USF1-202ENST00000368020 TANGO6Q9C0B7 1094 aa15.47■□□□□ 0.07
USF1-202ENST00000368020 KCTD10Q9H3F6 313 aa15.47■□□□□ 0.07
USF1-202ENST00000368020 OLFML3Q9NRN5 406 aa15.47■□□□□ 0.07
USF1-202ENST00000368020 SEL1LQ9UBV2 794 aa15.47■□□□□ 0.07
USF1-202ENST00000368020 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.47■□□□□ 0.07
USF1-202ENST00000368020 V9GYY5 206 aaPredicted RBP15.47■□□□□ 0.07
USF1-202ENST00000368020 DOCK1Q14185 1865 aa15.47■□□□□ 0.07
USF1-202ENST00000368020 SMCHD1A6NHR9 2005 aa15.46■□□□□ 0.07
USF1-202ENST00000368020 PDXKO00764 312 aa15.46■□□□□ 0.07
USF1-202ENST00000368020 USO1O60763 962 aaKnown RBP15.46■□□□□ 0.07
USF1-202ENST00000368020 PSMD10O75832 226 aa15.46■□□□□ 0.07
USF1-202ENST00000368020 FDX1P10109 184 aa15.46■□□□□ 0.07
USF1-202ENST00000368020 LRRC41Q15345 812 aa15.46■□□□□ 0.07
USF1-202ENST00000368020 KNOP1Q1ED39 458 aaKnown RBP15.46■□□□□ 0.07
USF1-202ENST00000368020 BMT2Q1RMZ1 405 aa15.46■□□□□ 0.07
USF1-202ENST00000368020 ARSHQ5FYA8 562 aa15.46■□□□□ 0.07
USF1-202ENST00000368020 CCDC174Q6PII3 467 aa15.46■□□□□ 0.07
USF1-202ENST00000368020 DLK2Q6UY11 383 aa15.46■□□□□ 0.07
USF1-202ENST00000368020 RSRC2Q7L4I2 434 aaKnown RBP15.46■□□□□ 0.07
USF1-202ENST00000368020 NIPA1Q7RTP0 329 aa15.46■□□□□ 0.07
USF1-202ENST00000368020 SLC35F6Q8N357 371 aa15.46■□□□□ 0.07
USF1-202ENST00000368020 PRPF38AQ8NAV1 312 aaKnown RBP15.46■□□□□ 0.07
USF1-202ENST00000368020 SCFD1Q8WVM8 642 aa15.46■□□□□ 0.07
USF1-202ENST00000368020 MMRN2Q9H8L6 949 aa15.46■□□□□ 0.07
USF1-202ENST00000368020 LUC7LQ9NQ29 371 aaKnown RBP15.46■□□□□ 0.07
USF1-202ENST00000368020 CEP72Q9P209 647 aa15.46■□□□□ 0.07
USF1-202ENST00000368020 DDX41Q9UJV9 622 aaKnown RBP15.46■□□□□ 0.07
USF1-202ENST00000368020 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.46■□□□□ 0.07
USF1-202ENST00000368020 UBE4BO95155 1302 aa15.46■□□□□ 0.07
USF1-202ENST00000368020 ANO9A1A5B4 782 aa15.46■□□□□ 0.06
USF1-202ENST00000368020 RASSF10A6NK89 507 aa15.46■□□□□ 0.06
USF1-202ENST00000368020 EIF3DO15371 548 aaKnown RBP eCLIP15.46■□□□□ 0.06
USF1-202ENST00000368020 ATP8B1O43520 1251 aa15.46■□□□□ 0.06
USF1-202ENST00000368020 GAS7O60861 476 aa15.46■□□□□ 0.06
USF1-202ENST00000368020 ITGBL1O95965 494 aaPredicted RBP15.46■□□□□ 0.06
USF1-202ENST00000368020 BCRP11274 1271 aa15.46■□□□□ 0.06
USF1-202ENST00000368020 CHMP4BP1P59074 171 aa15.46■□□□□ 0.06
USF1-202ENST00000368020 GHRHRQ02643 423 aa15.46■□□□□ 0.06
USF1-202ENST00000368020 KIF5AQ12840 1032 aa15.46■□□□□ 0.06
USF1-202ENST00000368020 PABPC4Q13310 644 aaKnown RBP eCLIP15.46■□□□□ 0.063e-6■■■■□ 26.6
USF1-202ENST00000368020 CCDC122Q5T0U0 273 aa15.46■□□□□ 0.06
USF1-202ENST00000368020 OTOP1Q7RTM1 612 aa15.46■□□□□ 0.06
USF1-202ENST00000368020 ARMC9Q7Z3E5 817 aa15.46■□□□□ 0.06
USF1-202ENST00000368020 CACNA2D4Q7Z3S7 1137 aa15.46■□□□□ 0.06
USF1-202ENST00000368020 FRMD5Q7Z6J6 570 aa15.46■□□□□ 0.06
USF1-202ENST00000368020 TRIM59Q8IWR1 403 aa15.46■□□□□ 0.06
USF1-202ENST00000368020 JAKMIP2Q96AA8 810 aa15.46■□□□□ 0.06
USF1-202ENST00000368020 EEF2KMTQ96G04 330 aa15.46■□□□□ 0.06
USF1-202ENST00000368020 RIT2Q99578 217 aa15.46■□□□□ 0.06
USF1-202ENST00000368020 HSD17B14Q9BPX1 270 aa15.46■□□□□ 0.06
USF1-202ENST00000368020 REEP2Q9BRK0 252 aa15.46■□□□□ 0.06
USF1-202ENST00000368020 KIAA1683Q9H0B3 1180 aa15.46■□□□□ 0.06
USF1-202ENST00000368020 METTL14Q9HCE5 456 aaKnown RBP15.46■□□□□ 0.06
USF1-202ENST00000368020 PICK1Q9NRD5 415 aa15.46■□□□□ 0.06
USF1-202ENST00000368020 SSU72P8A0A1W2PR75 194 aa15.45■□□□□ 0.06
USF1-202ENST00000368020 SLC16A3O15427 465 aaKnown RBP15.45■□□□□ 0.06
USF1-202ENST00000368020 LCA5LO95447 670 aa15.45■□□□□ 0.06
USF1-202ENST00000368020 HSD17B4P51659 736 aa15.45■□□□□ 0.06
USF1-202ENST00000368020 VAV2P52735 878 aa15.45■□□□□ 0.06
USF1-202ENST00000368020 ADAM9Q13443 819 aa15.45■□□□□ 0.06
USF1-202ENST00000368020 KIAA1755Q5JYT7 1200 aa15.45■□□□□ 0.06
USF1-202ENST00000368020 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.45■□□□□ 0.06
USF1-202ENST00000368020 EPM2AIP1Q7L775 607 aaPredicted RBP15.45■□□□□ 0.06
USF1-202ENST00000368020 ANKRD13AQ8IZ07 590 aa15.45■□□□□ 0.06
USF1-202ENST00000368020 NACC1Q96RE7 527 aa15.45■□□□□ 0.06
USF1-202ENST00000368020 WDR18Q9BV38 432 aa15.45■□□□□ 0.06
USF1-202ENST00000368020 TEKT3Q9BXF9 490 aa15.45■□□□□ 0.06
USF1-202ENST00000368020 TYW1Q9NV66 732 aaKnown RBP15.45■□□□□ 0.06
USF1-202ENST00000368020 REXO2Q9Y3B8 237 aaKnown RBP15.45■□□□□ 0.06
USF1-202ENST00000368020 MEIS1O00470 390 aa15.44■□□□□ 0.06
USF1-202ENST00000368020 KIF3CO14782 793 aa15.44■□□□□ 0.06
USF1-202ENST00000368020 PTPRAP18433 802 aa15.44■□□□□ 0.06
USF1-202ENST00000368020 HERVK_113P62684 666 aa15.44■□□□□ 0.06
USF1-202ENST00000368020 BMS1Q14692 1282 aaKnown RBP15.44■□□□□ 0.06
USF1-202ENST00000368020 LDLRAD1Q5T700 205 aa15.44■□□□□ 0.06
USF1-202ENST00000368020 TMCO3Q6UWJ1 677 aa15.44■□□□□ 0.06
USF1-202ENST00000368020 ZKSCAN4Q969J2 545 aaPredicted RBP15.44■□□□□ 0.06
USF1-202ENST00000368020 RPGRIP1Q96KN7 1286 aa15.44■□□□□ 0.06
USF1-202ENST00000368020 IRX2Q9BZI1 471 aaPredicted RBP15.44■□□□□ 0.06
USF1-202ENST00000368020 BHMT2Q9H2M3 363 aa15.44■□□□□ 0.06
USF1-202ENST00000368020 DEF6Q9H4E7 631 aa15.44■□□□□ 0.06
USF1-202ENST00000368020 ZHX3Q9H4I2 956 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms