RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 NEK9Q8TD19 979 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 CUL5Q93034 780 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 MAPK13O15264 365 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 C10orf62Q5T681 223 aaPredicted RBP4.04□□□□□ -1.76
SYNE1-207ENST00000367255 LIFRP42702 1097 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 DHX34Q14147 1143 aaKnown RBP4.04□□□□□ -1.76
SYNE1-207ENST00000367255 THOC7Q6I9Y2 204 aaKnown RBP4.04□□□□□ -1.76
SYNE1-207ENST00000367255 STON2Q8WXE9 905 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 ARHGEF9O43307 516 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 PCGF5Q86SE9 256 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 DMRT2Q9Y5R5 561 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 CCDC130P13994 396 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 KRT9P35527 623 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 MARSP56192 900 aaKnown RBP4.04□□□□□ -1.76
SYNE1-207ENST00000367255 KLC1Q07866 573 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 VPS52Q8N1B4 723 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 OGFOD1Q8N543 542 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 SLC9A1P19634 815 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 EPS8L1Q8TE68 723 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 GPBP1L1Q9HC44 474 aaPredicted RBP4.04□□□□□ -1.76
SYNE1-207ENST00000367255 SLCO1B7G3V0H7 640 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 DNAJA2O60884 412 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 TMEM127O75204 238 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 CDH16O75309 829 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 OVOS2A0A0G2JMS6 1433 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 OVOS2A0A0J9YW53 1432 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 hCG_1642624A0A1W2PR95 340 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 H0YJX3 145 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 MEFVO15553 781 aaPredicted RBP4.04□□□□□ -1.76
SYNE1-207ENST00000367255 PPP6R2O75170 966 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 SEC31AO94979 1220 aaKnown RBP4.04□□□□□ -1.76
SYNE1-207ENST00000367255 SERPINB5P36952 375 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 DRG2P55039 364 aaKnown RBP4.04□□□□□ -1.76
SYNE1-207ENST00000367255 OVOS2Q6IE36 1432 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 KRBA2Q6ZNG9 492 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 HAUS6Q7Z4H7 955 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 METTL16Q86W50 562 aaKnown RBP4.04□□□□□ -1.76
SYNE1-207ENST00000367255 STX19Q8N4C7 294 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 CALML4Q96GE6 196 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 CCDC90BQ9GZT6 254 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 TXNDC16Q9P2K2 825 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 TRIM69Q86WT6 500 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 PLD6Q8N2A8 252 aaKnown RBP4.04□□□□□ -1.76
SYNE1-207ENST00000367255 PPP1R36Q96LQ0 422 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 ORC6Q9Y5N6 252 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 ZNF521Q96K83 1311 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 SNX32Q86XE0 403 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 CNNM3Q8NE01 707 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 PTTG3PQ9NZH4 202 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 NSFL1CQ9UNZ2 370 aaKnown RBP4.04□□□□□ -1.76
SYNE1-207ENST00000367255 EVA1CP58658 441 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 HAND2P61296 217 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 KCTD21Q4G0X4 260 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 TBC1D9Q6ZT07 1266 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 C1orf50Q9BV19 199 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 DUOX2Q9NRD8 1548 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 PLXNC1O60486 1568 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 AP3M2P53677 418 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 GFPT1Q06210 699 aaPredicted RBP4.04□□□□□ -1.76
SYNE1-207ENST00000367255 CCDC15Q0P6D6 951 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 MYBPC2Q14324 1141 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 SNX31Q8N9S9 440 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 IL12AP29459 219 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 PPARGP37231 505 aaPredicted RBP4.04□□□□□ -1.76
SYNE1-207ENST00000367255 SNAP25P60880 206 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 CCDC24Q8N4L8 307 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 OR9Q1Q8NGQ5 310 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 TTLL11Q8NHH1 800 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 FBXL5Q9UKA1 691 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 LONP1P36776 959 aaKnown RBP4.04□□□□□ -1.76
SYNE1-207ENST00000367255 PLS1Q14651 629 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 CCDC138Q96M89 665 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 KLF6Q99612 283 aaPredicted RBP4.04□□□□□ -1.76
SYNE1-207ENST00000367255 WDR37Q9Y2I8 494 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 TRIM17Q9Y577 477 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 EMSYQ7Z589 1322 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 TLDC2A0PJX2 215 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 P4HA2O15460 535 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 TOP3BO95985 862 aaKnown RBP4.04□□□□□ -1.76
SYNE1-207ENST00000367255 HMBSP08397 361 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 PNMA6AP0CW24 399 aaPredicted RBP4.04□□□□□ -1.76
SYNE1-207ENST00000367255 STAT1P42224 750 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 AP2B1P63010 937 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 MYSM1Q5VVJ2 828 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 KRT35Q92764 455 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 ZBED2Q9BTP6 218 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 KRT38O76015 456 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 ESRRAP11474 423 aaPredicted RBP4.04□□□□□ -1.76
SYNE1-207ENST00000367255 SPIRE1Q08AE8 756 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 SLFN12Q8IYM2 578 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 ZBED6P86452 979 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 CDC42EP1Q00587 391 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 GRAMD4Q6IC98 578 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 CRACR2BQ8N4Y2 399 aaPredicted RBP4.04□□□□□ -1.76
SYNE1-207ENST00000367255 SENP2Q9HC62 589 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 SEC14L4Q9UDX3 406 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 PTPDC1A2A3K4 754 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 PGRMC1O00264 195 aaKnown RBP4.04□□□□□ -1.76
SYNE1-207ENST00000367255 STARD3NLO95772 234 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 PATL1Q86TB9 770 aaKnown RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms