RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 MAP3K14Q99558 947 aa12.98□□□□□ -0.33
CDC42BPA-203ENST00000366766 ANO3Q9BYT9 981 aa12.98□□□□□ -0.33
CDC42BPA-203ENST00000366766 SFNP31947 248 aa12.98□□□□□ -0.33
CDC42BPA-203ENST00000366766 MSH2P43246 934 aa12.98□□□□□ -0.33
CDC42BPA-203ENST00000366766 SLITRK6Q9H5Y7 841 aa12.98□□□□□ -0.33
CDC42BPA-203ENST00000366766 NNTQ13423 1086 aa12.98□□□□□ -0.33
CDC42BPA-203ENST00000366766 TBC1D9BQ66K14 1250 aa12.98□□□□□ -0.33
CDC42BPA-203ENST00000366766 DPH5Q9H2P9 285 aa12.98□□□□□ -0.33
CDC42BPA-203ENST00000366766 IQANK1A0A1B0GTG1 560 aa12.98□□□□□ -0.33
CDC42BPA-203ENST00000366766 SGK1O00141 431 aa12.98□□□□□ -0.33
CDC42BPA-203ENST00000366766 BAG6P46379 1132 aa12.98□□□□□ -0.33
CDC42BPA-203ENST00000366766 FAM133AQ8N9E0 248 aa12.98□□□□□ -0.33
CDC42BPA-203ENST00000366766 PIGBQ92521 554 aa12.98□□□□□ -0.33
CDC42BPA-203ENST00000366766 PDIA5Q14554 519 aa12.98□□□□□ -0.33
CDC42BPA-203ENST00000366766 RSPH3Q86UC2 560 aa12.98□□□□□ -0.33
CDC42BPA-203ENST00000366766 FAM129AQ9BZQ8 928 aa12.98□□□□□ -0.33
CDC42BPA-203ENST00000366766 ANKFY1Q9P2R3 1169 aa12.98□□□□□ -0.33
CDC42BPA-203ENST00000366766 F8W8V4 182 aa12.97□□□□□ -0.33
CDC42BPA-203ENST00000366766 IFT88Q13099 833 aa12.97□□□□□ -0.33
CDC42BPA-203ENST00000366766 EXOC1LA0A1B0GW35 172 aa12.97□□□□□ -0.33
CDC42BPA-203ENST00000366766 CLTAP09496 248 aa12.97□□□□□ -0.33
CDC42BPA-203ENST00000366766 ACTN1P12814 892 aa12.97□□□□□ -0.33
CDC42BPA-203ENST00000366766 TERF2Q15554 542 aa12.97□□□□□ -0.33
CDC42BPA-203ENST00000366766 SEPT9Q9UHD8 586 aaPredicted RBP12.97□□□□□ -0.33
CDC42BPA-203ENST00000366766 ATP8A1Q9Y2Q0 1164 aa12.97□□□□□ -0.33
CDC42BPA-203ENST00000366766 ARHGAP42A6NI28 874 aa12.97□□□□□ -0.33
CDC42BPA-203ENST00000366766 KIAA0391O15091 583 aaKnown RBP12.97□□□□□ -0.33
CDC42BPA-203ENST00000366766 PIGSQ96S52 555 aa12.97□□□□□ -0.33
CDC42BPA-203ENST00000366766 UBN2Q6ZU65 1347 aa12.97□□□□□ -0.33
CDC42BPA-203ENST00000366766 TYW5A2RUC4 315 aaKnown RBP12.97□□□□□ -0.33
CDC42BPA-203ENST00000366766 ACRBPQ8NEB7 543 aa12.97□□□□□ -0.33
CDC42BPA-203ENST00000366766 MICAL1Q8TDZ2 1067 aa12.97□□□□□ -0.33
CDC42BPA-203ENST00000366766 SENP1Q9P0U3 644 aa12.97□□□□□ -0.33
CDC42BPA-203ENST00000366766 TECPR2O15040 1411 aa12.97□□□□□ -0.33
CDC42BPA-203ENST00000366766 USP17L3A6NCW0 530 aa12.97□□□□□ -0.33
CDC42BPA-203ENST00000366766 USP17L4A6NCW7 530 aa12.97□□□□□ -0.33
CDC42BPA-203ENST00000366766 CPP00450 1065 aa12.97□□□□□ -0.33
CDC42BPA-203ENST00000366766 USP17L1Q7RTZ2 530 aa12.97□□□□□ -0.33
CDC42BPA-203ENST00000366766 EFCC1Q9HA90 598 aa12.97□□□□□ -0.33
CDC42BPA-203ENST00000366766 YWHAGP61981 247 aaKnown RBP eCLIP12.97□□□□□ -0.33
CDC42BPA-203ENST00000366766 SULF1Q8IWU6 871 aa12.97□□□□□ -0.33
CDC42BPA-203ENST00000366766 SMYD4Q8IYR2 804 aaPredicted RBP12.97□□□□□ -0.33
CDC42BPA-203ENST00000366766 ENAHQ8N8S7 591 aaPredicted RBP12.97□□□□□ -0.33
CDC42BPA-203ENST00000366766 TCP11Q8WWU5 503 aa12.97□□□□□ -0.33
CDC42BPA-203ENST00000366766 TTC1Q99614 292 aa12.97□□□□□ -0.33
CDC42BPA-203ENST00000366766 CCSER1Q9C0I3 900 aa12.97□□□□□ -0.33
CDC42BPA-203ENST00000366766 MMS19Q96T76 1030 aa12.97□□□□□ -0.33
CDC42BPA-203ENST00000366766 GINS2Q9Y248 185 aa12.97□□□□□ -0.33
CDC42BPA-203ENST00000366766 COL15A1P39059 1388 aa12.97□□□□□ -0.33
CDC42BPA-203ENST00000366766 LRRD1A4D1F6 860 aa12.96□□□□□ -0.33
CDC42BPA-203ENST00000366766 KRT37O76014 449 aa12.96□□□□□ -0.33
CDC42BPA-203ENST00000366766 COPB2P35606 906 aa12.96□□□□□ -0.33
CDC42BPA-203ENST00000366766 DRP2Q13474 957 aa12.96□□□□□ -0.33
CDC42BPA-203ENST00000366766 RTKN2Q8IZC4 609 aa12.96□□□□□ -0.33
CDC42BPA-203ENST00000366766 SERPINI1Q99574 410 aa12.96□□□□□ -0.33
CDC42BPA-203ENST00000366766 ISCA1Q9BUE6 129 aa12.96□□□□□ -0.33
CDC42BPA-203ENST00000366766 FBXO40Q9UH90 709 aa12.96□□□□□ -0.33
CDC42BPA-203ENST00000366766 DNAJC8O75937 253 aaPredicted RBP12.96□□□□□ -0.33
CDC42BPA-203ENST00000366766 SKIP12755 728 aa12.96□□□□□ -0.33
CDC42BPA-203ENST00000366766 ERCC3P19447 782 aa12.96□□□□□ -0.33
CDC42BPA-203ENST00000366766 DPY19L2Q6NUT2 758 aa12.96□□□□□ -0.33
CDC42BPA-203ENST00000366766 RAB44Q7Z6P3 723 aaPredicted RBP12.96□□□□□ -0.33
CDC42BPA-203ENST00000366766 MKRN3Q13064 507 aaKnown RBP12.96□□□□□ -0.33
CDC42BPA-203ENST00000366766 CCDC93Q567U6 631 aa12.96□□□□□ -0.33
CDC42BPA-203ENST00000366766 NARFQ9UHQ1 456 aa12.96□□□□□ -0.33
CDC42BPA-203ENST00000366766 ENC1O14682 589 aa12.96□□□□□ -0.33
CDC42BPA-203ENST00000366766 MRGBPQ9NV56 204 aa12.96□□□□□ -0.33
CDC42BPA-203ENST00000366766 MRRFQ96E11 262 aaKnown RBP12.96□□□□□ -0.33
CDC42BPA-203ENST00000366766 ERFEQ4G0M1 354 aa12.96□□□□□ -0.33
CDC42BPA-203ENST00000366766 NLRP7Q8WX94 980 aa12.96□□□□□ -0.33
CDC42BPA-203ENST00000366766 STK38LQ9Y2H1 464 aa12.96□□□□□ -0.33
CDC42BPA-203ENST00000366766 CA8P35219 290 aa12.96□□□□□ -0.34
CDC42BPA-203ENST00000366766 ARL4AP40617 200 aa12.96□□□□□ -0.34
CDC42BPA-203ENST00000366766 PLTPP55058 493 aa12.96□□□□□ -0.34
CDC42BPA-203ENST00000366766 KRT10P13645 584 aa12.96□□□□□ -0.34
CDC42BPA-203ENST00000366766 CHRNA3P32297 505 aa12.96□□□□□ -0.34
CDC42BPA-203ENST00000366766 EXOSC10Q01780 885 aaKnown RBP12.96□□□□□ -0.34
CDC42BPA-203ENST00000366766 TAP1Q03518 808 aa12.96□□□□□ -0.34
CDC42BPA-203ENST00000366766 NCOA3Q9Y6Q9 1424 aa12.96□□□□□ -0.34
CDC42BPA-203ENST00000366766 MAPK13O15264 365 aa12.96□□□□□ -0.34
CDC42BPA-203ENST00000366766 LARGE1O95461 756 aa12.96□□□□□ -0.34
CDC42BPA-203ENST00000366766 SMARCA1P28370 1054 aa12.96□□□□□ -0.34
CDC42BPA-203ENST00000366766 LIG3P49916 1009 aa12.96□□□□□ -0.34
CDC42BPA-203ENST00000366766 PDE1BQ01064 536 aa12.96□□□□□ -0.34
CDC42BPA-203ENST00000366766 SEPT14Q6ZU15 432 aa12.96□□□□□ -0.34
CDC42BPA-203ENST00000366766 XXYLT1Q8NBI6 393 aa12.96□□□□□ -0.34
CDC42BPA-203ENST00000366766 MAGEA9P43362 315 aa12.95□□□□□ -0.34
CDC42BPA-203ENST00000366766 NBPF10Q6P3W6 841 aaKnown RBP12.95□□□□□ -0.34
CDC42BPA-203ENST00000366766 PGBD1Q96JS3 809 aa12.95□□□□□ -0.34
CDC42BPA-203ENST00000366766 H7C0C1 242 aa12.95□□□□□ -0.34
CDC42BPA-203ENST00000366766 ATP5OP48047 213 aa12.95□□□□□ -0.34
CDC42BPA-203ENST00000366766 SCNN1DP51172 638 aa12.95□□□□□ -0.34
CDC42BPA-203ENST00000366766 IGBP1P78318 339 aa12.95□□□□□ -0.34
CDC42BPA-203ENST00000366766 KYAT1Q16773 422 aa12.95□□□□□ -0.34
CDC42BPA-203ENST00000366766 PIH1D3Q9NQM4 214 aaKnown RBP12.95□□□□□ -0.34
CDC42BPA-203ENST00000366766 ANGPTL2Q9UKU9 493 aa12.95□□□□□ -0.34
CDC42BPA-203ENST00000366766 BAG5Q9UL15 447 aa12.95□□□□□ -0.34
CDC42BPA-203ENST00000366766 UBE4BO95155 1302 aa12.95□□□□□ -0.34
CDC42BPA-203ENST00000366766 MYH10P35580 1976 aa12.95□□□□□ -0.34
CDC42BPA-203ENST00000366766 SERPINB2P05120 415 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms