RNA–Protein interactions for RNA: ENST00000366738.5

MRPL55-211, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 1 (best) BASIC

Gene MRPL55, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-211ENST00000366738 PRPF3O43395 683 aaKnown RBP9.36□□□□□ -0.91
MRPL55-211ENST00000366738 KPNA6O60684 536 aa9.36□□□□□ -0.91
MRPL55-211ENST00000366738 CDKL5O76039 1030 aa9.36□□□□□ -0.91
MRPL55-211ENST00000366738 CFBP00751 764 aa9.36□□□□□ -0.91
MRPL55-211ENST00000366738 GH1P01241 217 aa9.36□□□□□ -0.91
MRPL55-211ENST00000366738 NR3C2P08235 984 aa9.36□□□□□ -0.91
MRPL55-211ENST00000366738 HOXA13P31271 388 aaPredicted RBP9.36□□□□□ -0.91
MRPL55-211ENST00000366738 PTPN5P54829 565 aa9.36□□□□□ -0.91
MRPL55-211ENST00000366738 SP2Q02086 613 aa9.36□□□□□ -0.91
MRPL55-211ENST00000366738 SSRP1Q08945 709 aaKnown RBP9.36□□□□□ -0.91
MRPL55-211ENST00000366738 RBL2Q08999 1139 aa9.36□□□□□ -0.91
MRPL55-211ENST00000366738 GPM6BQ13491 265 aa9.36□□□□□ -0.91
MRPL55-211ENST00000366738 IKBKEQ14164 716 aa9.36□□□□□ -0.91
MRPL55-211ENST00000366738 COL19A1Q14993 1142 aa9.36□□□□□ -0.91
MRPL55-211ENST00000366738 STXBP2Q15833 593 aa9.36□□□□□ -0.91
MRPL55-211ENST00000366738 ZNF618Q5T7W0 954 aa9.36□□□□□ -0.91
MRPL55-211ENST00000366738 TRAF7Q6Q0C0 670 aa9.36□□□□□ -0.91
MRPL55-211ENST00000366738 RPAINQ86UA6 219 aa9.36□□□□□ -0.91
MRPL55-211ENST00000366738 SESTD1Q86VW0 696 aa9.36□□□□□ -0.91
MRPL55-211ENST00000366738 MYOCDQ8IZQ8 938 aa9.36□□□□□ -0.91
MRPL55-211ENST00000366738 SP7Q8TDD2 431 aaPredicted RBP9.36□□□□□ -0.91
MRPL55-211ENST00000366738 IWS1Q96ST2 819 aa9.36□□□□□ -0.91
MRPL55-211ENST00000366738 LLPHQ9BRT6 129 aaKnown RBP9.36□□□□□ -0.91
MRPL55-211ENST00000366738 MAF1Q9H063 256 aa9.36□□□□□ -0.91
MRPL55-211ENST00000366738 ORC3Q9UBD5 711 aaPredicted RBP9.36□□□□□ -0.91
MRPL55-211ENST00000366738 FAM50BQ9Y247 325 aa9.36□□□□□ -0.91
MRPL55-211ENST00000366738 MRPL11Q9Y3B7 192 aaKnown RBP9.36□□□□□ -0.91
MRPL55-211ENST00000366738 INSL6Q9Y581 213 aa9.36□□□□□ -0.91
MRPL55-211ENST00000366738 KMT2EQ8IZD2 1858 aa9.36□□□□□ -0.91
MRPL55-211ENST00000366738 H3BNC9 293 aa9.35□□□□□ -0.91
MRPL55-211ENST00000366738 STXBP3O00186 592 aa9.35□□□□□ -0.91
MRPL55-211ENST00000366738 HAS3O00219 553 aa9.35□□□□□ -0.91
MRPL55-211ENST00000366738 ADAMTS3O15072 1205 aa9.35□□□□□ -0.91
MRPL55-211ENST00000366738 SORBS3O60504 671 aa9.35□□□□□ -0.91
MRPL55-211ENST00000366738 EFCAB14O75071 495 aa9.35□□□□□ -0.91
MRPL55-211ENST00000366738 CSPG5O95196 566 aa9.35□□□□□ -0.91
MRPL55-211ENST00000366738 DEXIO95424 95 aa9.35□□□□□ -0.91
MRPL55-211ENST00000366738 ZNF286BP0CG31 522 aa9.35□□□□□ -0.91
MRPL55-211ENST00000366738 SCG2P13521 617 aa9.35□□□□□ -0.91
MRPL55-211ENST00000366738 SMARCA1P28370 1054 aa9.35□□□□□ -0.91
MRPL55-211ENST00000366738 LTBRP36941 435 aa9.35□□□□□ -0.91
MRPL55-211ENST00000366738 HTRA4P83105 476 aaPredicted RBP9.35□□□□□ -0.91
MRPL55-211ENST00000366738 ZNF200P98182 395 aaPredicted RBP9.35□□□□□ -0.91
MRPL55-211ENST00000366738 DLX2Q07687 328 aaPredicted RBP9.35□□□□□ -0.91
MRPL55-211ENST00000366738 TCF15Q12870 199 aa9.35□□□□□ -0.91
MRPL55-211ENST00000366738 MKRN4PQ13434 485 aaPredicted RBP9.35□□□□□ -0.91
MRPL55-211ENST00000366738 PFKFB3Q16875 520 aaPredicted RBP9.35□□□□□ -0.91
MRPL55-211ENST00000366738 TRIM71Q2Q1W2 868 aaKnown RBP9.35□□□□□ -0.91
MRPL55-211ENST00000366738 HERC4Q5GLZ8 1057 aaPredicted RBP9.35□□□□□ -0.91
MRPL55-211ENST00000366738 ARHGEF16Q5VV41 709 aa9.35□□□□□ -0.91
MRPL55-211ENST00000366738 CPLX2Q6PUV4 134 aaKnown RBP9.35□□□□□ -0.91
MRPL55-211ENST00000366738 HEATR3Q7Z4Q2 680 aa9.35□□□□□ -0.91
MRPL55-211ENST00000366738 MCF2L2Q86YR7 1114 aa9.35□□□□□ -0.91
MRPL55-211ENST00000366738 RNF135Q8IUD6 432 aa9.35□□□□□ -0.91
MRPL55-211ENST00000366738 TRIM22Q8IYM9 498 aa9.35□□□□□ -0.91
MRPL55-211ENST00000366738 EMID1Q96A84 441 aaPredicted RBP9.35□□□□□ -0.91
MRPL55-211ENST00000366738 RRP36Q96EU6 259 aaKnown RBP9.35□□□□□ -0.91
MRPL55-211ENST00000366738 INTS4Q96HW7 963 aaKnown RBP9.35□□□□□ -0.91
MRPL55-211ENST00000366738 MPHOSPH6Q99547 160 aaKnown RBP9.35□□□□□ -0.91
MRPL55-211ENST00000366738 PDCD2LQ9BRP1 358 aa9.35□□□□□ -0.91
MRPL55-211ENST00000366738 ALG1Q9BT22 464 aa9.35□□□□□ -0.91
MRPL55-211ENST00000366738 AMNQ9BXJ7 453 aa9.35□□□□□ -0.91
MRPL55-211ENST00000366738 NSUN3Q9H649 340 aaKnown RBP9.35□□□□□ -0.91
MRPL55-211ENST00000366738 VPS54Q9P1Q0 977 aa9.35□□□□□ -0.91
MRPL55-211ENST00000366738 HDAC6Q9UBN7 1215 aa9.35□□□□□ -0.91
MRPL55-211ENST00000366738 SEC63Q9UGP8 760 aaKnown RBP9.35□□□□□ -0.91
MRPL55-211ENST00000366738 GTF2IRD1Q9UHL9 959 aa9.35□□□□□ -0.91
MRPL55-211ENST00000366738 SMC3Q9UQE7 1217 aa9.35□□□□□ -0.91
MRPL55-211ENST00000366738 TELO2Q9Y4R8 837 aa9.35□□□□□ -0.91
MRPL55-211ENST00000366738 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.35□□□□□ -0.91
MRPL55-211ENST00000366738 EPG5Q9HCE0 2579 aa9.35□□□□□ -0.91
MRPL55-211ENST00000366738 PNMA6FA0A0J9YX94 578 aa9.34□□□□□ -0.91
MRPL55-211ENST00000366738 MBTPS2O43462 519 aa9.34□□□□□ -0.91
MRPL55-211ENST00000366738 GFRA3O60609 400 aa9.34□□□□□ -0.91
MRPL55-211ENST00000366738 LGR5O75473 907 aa9.34□□□□□ -0.91
MRPL55-211ENST00000366738 EIF3JO75822 258 aaKnown RBP9.34□□□□□ -0.91
MRPL55-211ENST00000366738 PARNO95453 639 aaKnown RBP9.34□□□□□ -0.91
MRPL55-211ENST00000366738 F2P00734 622 aa9.34□□□□□ -0.91
MRPL55-211ENST00000366738 AMHP03971 560 aa9.34□□□□□ -0.91
MRPL55-211ENST00000366738 HSP90AA1P07900 732 aaKnown RBP9.34□□□□□ -0.91
MRPL55-211ENST00000366738 MYCLP12524 364 aaPredicted RBP9.34□□□□□ -0.91
MRPL55-211ENST00000366738 HOXD8P13378 290 aaPredicted RBP9.34□□□□□ -0.91
MRPL55-211ENST00000366738 PSEN2P49810 448 aa9.34□□□□□ -0.91
MRPL55-211ENST00000366738 HMGN5P82970 282 aaKnown RBP9.34□□□□□ -0.91
MRPL55-211ENST00000366738 GUCY1B3Q02153 619 aa9.34□□□□□ -0.91
MRPL55-211ENST00000366738 PKP1Q13835 747 aa9.34□□□□□ -0.91
MRPL55-211ENST00000366738 PGM5Q15124 567 aa9.34□□□□□ -0.91
MRPL55-211ENST00000366738 SMAD2Q15796 467 aaKnown RBP9.34□□□□□ -0.91
MRPL55-211ENST00000366738 HSDL1Q3SXM5 330 aa9.34□□□□□ -0.91
MRPL55-211ENST00000366738 MYSM1Q5VVJ2 828 aa9.34□□□□□ -0.91
MRPL55-211ENST00000366738 VSIG10LQ86VR7 867 aa9.34□□□□□ -0.91
MRPL55-211ENST00000366738 TMEM192Q8IY95 271 aa9.34□□□□□ -0.91
MRPL55-211ENST00000366738 C7orf31Q8N865 590 aa9.34□□□□□ -0.91
MRPL55-211ENST00000366738 DBF4BQ8NFT6 615 aa9.34□□□□□ -0.91
MRPL55-211ENST00000366738 IPO9Q96P70 1041 aaKnown RBP9.34□□□□□ -0.91
MRPL55-211ENST00000366738 OSBPL7Q9BZF2 842 aa9.34□□□□□ -0.91
MRPL55-211ENST00000366738 PCDHA1Q9Y5I3 950 aa9.34□□□□□ -0.91
MRPL55-211ENST00000366738 MRVI1Q9Y6F6 885 aa9.34□□□□□ -0.91
MRPL55-211ENST00000366738 VPS13AQ96RL7 3174 aa9.33□□□□□ -0.92
MRPL55-211ENST00000366738 MYH7BA7E2Y1 1941 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms