RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 POTEGQ6S5H5 508 aa15.1■□□□□ 0.01
COL6A1-201ENST00000361866 POTEEQ6S8J3 1075 aa15.1■□□□□ 0.01
COL6A1-201ENST00000361866 ZNF473Q8WTR7 871 aaKnown RBP15.1■□□□□ 0.01
COL6A1-201ENST00000361866 SLC24A3Q9HC58 644 aa15.1■□□□□ 0.01
COL6A1-201ENST00000361866 KIF20BQ96Q89 1820 aa15.1■□□□□ 0.01
COL6A1-201ENST00000361866 NPHP3-ACAD11A0A0J9YXS1 232 aa15.1■□□□□ 0.01
COL6A1-201ENST00000361866 ZNF746Q6NUN9 644 aaPredicted RBP15.1■□□□□ 0.01
COL6A1-201ENST00000361866 NSMFQ6X4W1 530 aa15.1■□□□□ 0.01
COL6A1-201ENST00000361866 SFR1Q86XK3 245 aa15.1■□□□□ 0.01
COL6A1-201ENST00000361866 CNTNAP5Q8WYK1 1306 aa15.1■□□□□ 0.01
COL6A1-201ENST00000361866 FAM196BA6NMK8 535 aa15.09■□□□□ 0.01
COL6A1-201ENST00000361866 LMNB1P20700 586 aa15.09■□□□□ 0.01
COL6A1-201ENST00000361866 PPP2R5EQ16537 467 aa15.09■□□□□ 0.01
COL6A1-201ENST00000361866 DCUN1D2Q6PH85 259 aa15.09■□□□□ 0.01
COL6A1-201ENST00000361866 FBXO11Q86XK2 927 aa15.09■□□□□ 0.01
COL6A1-201ENST00000361866 GLYCTKQ8IVS8 523 aa15.09■□□□□ 0.01
COL6A1-201ENST00000361866 KLC4Q9NSK0 619 aa15.09■□□□□ 0.01
COL6A1-201ENST00000361866 RAB21Q9UL25 225 aa15.09■□□□□ 0.01
COL6A1-201ENST00000361866 RAD51CO43502 376 aa15.09■□□□□ 0.01
COL6A1-201ENST00000361866 HNRNPH1P31943 449 aaKnown RBP15.09■□□□□ 0.01
COL6A1-201ENST00000361866 MDH1P40925 334 aaKnown RBP15.09■□□□□ 0.01
COL6A1-201ENST00000361866 PPP2R2AP63151 447 aa15.09■□□□□ 0.01
COL6A1-201ENST00000361866 TRAF1Q13077 416 aa15.09■□□□□ 0.01
COL6A1-201ENST00000361866 SLFN12Q8IYM2 578 aa15.09■□□□□ 0.01
COL6A1-201ENST00000361866 UBE2TQ9NPD8 197 aaPredicted RBP15.09■□□□□ 0.01
COL6A1-201ENST00000361866 NOC2LQ9Y3T9 749 aaKnown RBP15.09■□□□□ 0.01
COL6A1-201ENST00000361866 PVALEFA0A1B0GWK0 134 aa15.09■□□□□ 0.01
COL6A1-201ENST00000361866 SORBS3O60504 671 aa15.09■□□□□ 0.01
COL6A1-201ENST00000361866 DESP17661 470 aa15.09■□□□□ 0.01
COL6A1-201ENST00000361866 GBP1P32455 592 aa15.09■□□□□ 0.01
COL6A1-201ENST00000361866 RBM26Q5T8P6 1007 aaKnown RBP15.09■□□□□ 0.01
COL6A1-201ENST00000361866 FAM47EQ6ZV65 393 aa15.09■□□□□ 0.01
COL6A1-201ENST00000361866 PACS2Q86VP3 889 aa15.09■□□□□ 0.01
COL6A1-201ENST00000361866 RAD54LQ92698 747 aa15.09■□□□□ 0.01
COL6A1-201ENST00000361866 HVCN1Q96D96 273 aa15.09■□□□□ 0.01
COL6A1-201ENST00000361866 PSMD1Q99460 953 aa15.09■□□□□ 0.01
COL6A1-201ENST00000361866 SERPINB13Q9UIV8 391 aa15.09■□□□□ 0.01
COL6A1-201ENST00000361866 SPATA31A3Q5VYP0 1347 aa15.09■□□□□ 0.01
COL6A1-201ENST00000361866 PASKQ96RG2 1323 aa15.09■□□□□ 0.01
COL6A1-201ENST00000361866 PSMC2P35998 433 aaKnown RBP15.09■□□□□ 0.01
COL6A1-201ENST00000361866 MYL7Q01449 175 aa15.09■□□□□ 0.01
COL6A1-201ENST00000361866 MYO1EQ12965 1108 aa15.09■□□□□ 0.01
COL6A1-201ENST00000361866 PSMD2Q13200 908 aa15.09■□□□□ 0.01
COL6A1-201ENST00000361866 CTTNQ14247 550 aaKnown RBP15.09■□□□□ 0.01
COL6A1-201ENST00000361866 FYB2Q5VWT5 728 aa15.09■□□□□ 0.01
COL6A1-201ENST00000361866 ZNF653Q96CK0 615 aa15.09■□□□□ 0.01
COL6A1-201ENST00000361866 ACTR5Q9H9F9 607 aaPredicted RBP15.09■□□□□ 0.01
COL6A1-201ENST00000361866 SH3GLB2Q9NR46 395 aa15.09■□□□□ 0.01
COL6A1-201ENST00000361866 MAP2K7O14733 419 aa15.08■□□□□ 0.01
COL6A1-201ENST00000361866 TTI1O43156 1089 aa15.08■□□□□ 0.01
COL6A1-201ENST00000361866 TNNI1P19237 187 aa15.08■□□□□ 0.01
COL6A1-201ENST00000361866 SMTNP53814 917 aa15.08■□□□□ 0.01
COL6A1-201ENST00000361866 PDS5AQ29RF7 1337 aaKnown RBP15.08■□□□□ 0.01
COL6A1-201ENST00000361866 ANKRD20A3Q5VUR7 823 aa15.08■□□□□ 0.01
COL6A1-201ENST00000361866 NSUN4Q96CB9 384 aaKnown RBP15.08■□□□□ 0.01
COL6A1-201ENST00000361866 ASPRV1Q53RT3 343 aa15.08■□□□□ 0
COL6A1-201ENST00000361866 OGFOD1Q8N543 542 aa15.08■□□□□ 0
COL6A1-201ENST00000361866 RBM17Q96I25 401 aaKnown RBP15.08■□□□□ 0
COL6A1-201ENST00000361866 TRIM51Q9BSJ1 452 aa15.08■□□□□ 0
COL6A1-201ENST00000361866 PLA2G12BQ9BX93 195 aa15.08■□□□□ 0
COL6A1-201ENST00000361866 TMOD4Q9NZQ9 345 aa15.08■□□□□ 0
COL6A1-201ENST00000361866 CCDC188H7C350 402 aa15.08■□□□□ 0
COL6A1-201ENST00000361866 TTLL1O95922 423 aa15.08■□□□□ 0
COL6A1-201ENST00000361866 VEGFAP15692 232 aaPredicted RBP15.08■□□□□ 0
COL6A1-201ENST00000361866 MDM2Q00987 491 aaPredicted RBP15.08■□□□□ 0
COL6A1-201ENST00000361866 ICA1Q05084 483 aa15.08■□□□□ 0
COL6A1-201ENST00000361866 CERKLQ49MI3 558 aaPredicted RBP15.08■□□□□ 0
COL6A1-201ENST00000361866 SGO2Q562F6 1265 aa15.08■□□□□ 0
COL6A1-201ENST00000361866 CELF4Q9BZC1 486 aaKnown RBP15.08■□□□□ 0
COL6A1-201ENST00000361866 EPN3Q9H201 632 aa15.08■□□□□ 0
COL6A1-201ENST00000361866 HAUS2Q9NVX0 235 aa15.08■□□□□ 0
COL6A1-201ENST00000361866 LARSQ9P2J5 1176 aaKnown RBP15.08■□□□□ 0
COL6A1-201ENST00000361866 RNF225M0QZC1 329 aaPredicted RBP15.07■□□□□ 0
COL6A1-201ENST00000361866 CACNB3P54284 484 aa15.07■□□□□ 0
COL6A1-201ENST00000361866 PKN1Q16512 942 aa15.07■□□□□ 0
COL6A1-201ENST00000361866 ZNF449Q6P9G9 518 aa15.07■□□□□ 0
COL6A1-201ENST00000361866 TMED8Q6PL24 325 aaPredicted RBP15.07■□□□□ 0
COL6A1-201ENST00000361866 TBC1D22AQ8WUA7 517 aa15.07■□□□□ 0
COL6A1-201ENST00000361866 PLAGL2Q9UPG8 496 aa15.07■□□□□ 0
COL6A1-201ENST00000361866 ZNF148Q9UQR1 794 aa15.07■□□□□ 0
COL6A1-201ENST00000361866 GDF11O95390 407 aa15.07■□□□□ 0
COL6A1-201ENST00000361866 COPB2P35606 906 aa15.07■□□□□ 0
COL6A1-201ENST00000361866 GRM4Q14833 912 aa15.07■□□□□ 0
COL6A1-201ENST00000361866 KCND1Q9NSA2 647 aa15.07■□□□□ 0
COL6A1-201ENST00000361866 DNAJC12Q9UKB3 198 aa15.07■□□□□ 0
COL6A1-201ENST00000361866 NEURL4Q96JN8 1562 aa15.07■□□□□ 0
COL6A1-201ENST00000361866 ATF2P15336 505 aa15.07■□□□□ 0
COL6A1-201ENST00000361866 TSNAXIP1Q2TAA8 658 aa15.07■□□□□ 0
COL6A1-201ENST00000361866 LRCH2Q5VUJ6 765 aa15.07■□□□□ 0
COL6A1-201ENST00000361866 ADGRA1Q86SQ6 560 aa15.07■□□□□ 0
COL6A1-201ENST00000361866 CTAGE3PQ8IX95 158 aa15.07■□□□□ 0
COL6A1-201ENST00000361866 NCAPGQ9BPX3 1015 aa15.07■□□□□ 0
COL6A1-201ENST00000361866 AZI2Q9H6S1 392 aa15.07■□□□□ 0
COL6A1-201ENST00000361866 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.07■□□□□ 0
COL6A1-201ENST00000361866 WDR91A4D1P6 747 aa15.06■□□□□ 0
COL6A1-201ENST00000361866 H0Y3Z8 333 aa15.06■□□□□ 0
COL6A1-201ENST00000361866 SLC9A1P19634 815 aa15.06■□□□□ 0
COL6A1-201ENST00000361866 MUM1Q2TAK8 710 aa15.06■□□□□ 0
COL6A1-201ENST00000361866 TMEM139Q8IV31 216 aa15.06■□□□□ 0
COL6A1-201ENST00000361866 HOOK2Q96ED9 719 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms