RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 CFAP221Q4G0U5 840 aa11.63□□□□□ -0.55
SMC3-201ENST00000361804 GPBP1Q86WP2 473 aa11.63□□□□□ -0.55
SMC3-201ENST00000361804 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.63□□□□□ -0.55
SMC3-201ENST00000361804 TMCO5BA8MYB1 307 aa11.63□□□□□ -0.55
SMC3-201ENST00000361804 RSPH10B2B2RC85 870 aa11.63□□□□□ -0.55
SMC3-201ENST00000361804 RSPH10BP0C881 870 aa11.63□□□□□ -0.55
SMC3-201ENST00000361804 DCAF17Q5H9S7 520 aaPredicted RBP11.63□□□□□ -0.55
SMC3-201ENST00000361804 CFAP58Q5T655 872 aa11.63□□□□□ -0.55
SMC3-201ENST00000361804 DDX47Q9H0S4 455 aaKnown RBP11.63□□□□□ -0.55
SMC3-201ENST00000361804 MAGEF1Q9HAY2 307 aa11.63□□□□□ -0.55
SMC3-201ENST00000361804 RGS17Q9UGC6 210 aaPredicted RBP11.63□□□□□ -0.55
SMC3-201ENST00000361804 ADRA2BP18089 450 aa11.63□□□□□ -0.55
SMC3-201ENST00000361804 FXR2P51116 673 aaKnown RBP eCLIP11.63□□□□□ -0.554e-7■■■□□ 15.2
SMC3-201ENST00000361804 APOBEC3HQ6NTF7 200 aaKnown RBP11.63□□□□□ -0.55
SMC3-201ENST00000361804 ZNF571Q7Z3V5 609 aaPredicted RBP11.63□□□□□ -0.55
SMC3-201ENST00000361804 KSR1Q8IVT5 923 aa11.63□□□□□ -0.55
SMC3-201ENST00000361804 RIOX1Q9H6W3 641 aa11.63□□□□□ -0.55
SMC3-201ENST00000361804 BCCIPQ9P287 314 aaKnown RBP eCLIP11.63□□□□□ -0.55
SMC3-201ENST00000361804 PCDHA12Q9UN75 941 aa11.63□□□□□ -0.55
SMC3-201ENST00000361804 ATP6V0A2Q9Y487 856 aa11.63□□□□□ -0.55
SMC3-201ENST00000361804 MED24O75448 989 aa11.62□□□□□ -0.55
SMC3-201ENST00000361804 ERVK-9P63128 1117 aa11.62□□□□□ -0.55
SMC3-201ENST00000361804 FKBP3Q00688 224 aaKnown RBP11.62□□□□□ -0.55
SMC3-201ENST00000361804 CYP4A11Q02928 519 aa11.62□□□□□ -0.55
SMC3-201ENST00000361804 NFIAQ12857 509 aa11.62□□□□□ -0.55
SMC3-201ENST00000361804 PABPC4Q13310 644 aaKnown RBP eCLIP11.62□□□□□ -0.553e-6■■■■□ 21.4
SMC3-201ENST00000361804 ADAM9Q13443 819 aa11.62□□□□□ -0.55
SMC3-201ENST00000361804 C7orf43Q8WVR3 580 aa11.62□□□□□ -0.55
SMC3-201ENST00000361804 TSG101Q99816 390 aa11.62□□□□□ -0.55
SMC3-201ENST00000361804 TRIM31Q9BZY9 425 aa11.62□□□□□ -0.55
SMC3-201ENST00000361804 MTMR4Q9NYA4 1195 aa11.62□□□□□ -0.55
SMC3-201ENST00000361804 PVALEFA0A1B0GWK0 134 aa11.62□□□□□ -0.55
SMC3-201ENST00000361804 DCDC2CA8MYV0 355 aa11.62□□□□□ -0.55
SMC3-201ENST00000361804 CLIC2O15247 247 aa11.62□□□□□ -0.55
SMC3-201ENST00000361804 PJA2O43164 708 aa11.62□□□□□ -0.55
SMC3-201ENST00000361804 CEP104O60308 925 aa11.62□□□□□ -0.55
SMC3-201ENST00000361804 CASP4P49662 377 aa11.62□□□□□ -0.55
SMC3-201ENST00000361804 GTF2IP78347 998 aa11.62□□□□□ -0.55
SMC3-201ENST00000361804 LRRC63Q05C16 580 aa11.62□□□□□ -0.55
SMC3-201ENST00000361804 TMEM119Q4V9L6 283 aa11.62□□□□□ -0.55
SMC3-201ENST00000361804 CEP85LQ5SZL2 805 aa11.62□□□□□ -0.55
SMC3-201ENST00000361804 PPM1EQ8WY54 764 aa11.62□□□□□ -0.55
SMC3-201ENST00000361804 INPP4AQ96PE3 977 aaPredicted RBP11.62□□□□□ -0.55
SMC3-201ENST00000361804 CELF4Q9BZC1 486 aaKnown RBP11.62□□□□□ -0.55
SMC3-201ENST00000361804 KRT18P05783 430 aaKnown RBP11.62□□□□□ -0.55
SMC3-201ENST00000361804 PLA2G4BP0C869 781 aa11.62□□□□□ -0.55
SMC3-201ENST00000361804 KCNH2Q12809 1159 aa11.62□□□□□ -0.55
SMC3-201ENST00000361804 ARSHQ5FYA8 562 aa11.62□□□□□ -0.55
SMC3-201ENST00000361804 TCERG1LQ5VWI1 586 aa11.62□□□□□ -0.55
SMC3-201ENST00000361804 ZNF804AQ7Z570 1209 aa11.62□□□□□ -0.55
SMC3-201ENST00000361804 RBM46Q8TBY0 533 aaKnown RBP11.62□□□□□ -0.55
SMC3-201ENST00000361804 PPANQ9NQ55 473 aaKnown RBP11.62□□□□□ -0.55
SMC3-201ENST00000361804 STK17AQ9UEE5 414 aa11.62□□□□□ -0.55
SMC3-201ENST00000361804 PLAAQ9Y263 795 aa11.62□□□□□ -0.55
SMC3-201ENST00000361804 LCTP09848 1927 aa11.62□□□□□ -0.55
SMC3-201ENST00000361804 ERLIN2O94905 339 aa11.62□□□□□ -0.55
SMC3-201ENST00000361804 TMOD1P28289 359 aa11.62□□□□□ -0.55
SMC3-201ENST00000361804 SHMT1P34896 483 aa11.62□□□□□ -0.55
SMC3-201ENST00000361804 HDLBPQ00341 1268 aaKnown RBP11.62□□□□□ -0.55
SMC3-201ENST00000361804 MKRN4PQ13434 485 aaPredicted RBP11.62□□□□□ -0.55
SMC3-201ENST00000361804 NAB2Q15742 525 aa11.62□□□□□ -0.55
SMC3-201ENST00000361804 ZNF572Q7Z3I7 529 aaPredicted RBP11.62□□□□□ -0.55
SMC3-201ENST00000361804 IQCKQ8N0W5 287 aa11.62□□□□□ -0.55
SMC3-201ENST00000361804 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.62□□□□□ -0.552e-6■■■■■ 99.6
SMC3-201ENST00000361804 CEP72Q9P209 647 aa11.62□□□□□ -0.55
SMC3-201ENST00000361804 GOLGA8KD6RF30 607 aa11.61□□□□□ -0.55
SMC3-201ENST00000361804 SERPING1P05155 500 aa11.61□□□□□ -0.55
SMC3-201ENST00000361804 EPS15P42566 896 aa11.61□□□□□ -0.55
SMC3-201ENST00000361804 EMBQ6PCB8 327 aa11.61□□□□□ -0.55
SMC3-201ENST00000361804 GDF3Q9NR23 364 aa11.61□□□□□ -0.55
SMC3-201ENST00000361804 CHORDC1Q9UHD1 332 aaPredicted RBP11.61□□□□□ -0.55
SMC3-201ENST00000361804 NR2E1Q9Y466 385 aa11.61□□□□□ -0.55
SMC3-201ENST00000361804 C6orf229H3BNL8 230 aa11.61□□□□□ -0.55
SMC3-201ENST00000361804 MYBP10242 640 aa11.61□□□□□ -0.55
SMC3-201ENST00000361804 NR2F2P24468 414 aa11.61□□□□□ -0.55
SMC3-201ENST00000361804 CLK2P49760 499 aaKnown RBP11.61□□□□□ -0.55
SMC3-201ENST00000361804 SLC18A3Q16572 532 aa11.61□□□□□ -0.55
SMC3-201ENST00000361804 MEI1Q5TIA1 1274 aa11.61□□□□□ -0.55
SMC3-201ENST00000361804 KCNV1Q6PIU1 500 aa11.61□□□□□ -0.55
SMC3-201ENST00000361804 TRIM59Q8IWR1 403 aa11.61□□□□□ -0.55
SMC3-201ENST00000361804 LZTS2Q9BRK4 669 aa11.61□□□□□ -0.55
SMC3-201ENST00000361804 EMILIN3Q9NT22 766 aa11.61□□□□□ -0.55
SMC3-201ENST00000361804 PCDHA2Q9Y5H9 948 aa11.61□□□□□ -0.55
SMC3-201ENST00000361804 PHIPQ8WWQ0 1821 aa11.61□□□□□ -0.55
SMC3-201ENST00000361804 SHTN1A0MZ66 631 aa11.61□□□□□ -0.55
SMC3-201ENST00000361804 ZBTB39O15060 712 aa11.61□□□□□ -0.55
SMC3-201ENST00000361804 PRLRP16471 622 aa11.61□□□□□ -0.55
SMC3-201ENST00000361804 LSP1P33241 339 aa11.61□□□□□ -0.55
SMC3-201ENST00000361804 SPRED3Q2MJR0 410 aa11.61□□□□□ -0.55
SMC3-201ENST00000361804 IFT20Q8IY31 132 aa11.61□□□□□ -0.55
SMC3-201ENST00000361804 CYP2W1Q8TAV3 490 aa11.61□□□□□ -0.55
SMC3-201ENST00000361804 OPA1O60313 960 aa11.6□□□□□ -0.55
SMC3-201ENST00000361804 CYP11B2P19099 503 aa11.6□□□□□ -0.55
SMC3-201ENST00000361804 HOXD13P35453 343 aa11.6□□□□□ -0.55
SMC3-201ENST00000361804 GTF2A1P52655 376 aaPredicted RBP11.6□□□□□ -0.55
SMC3-201ENST00000361804 GSTO1P78417 241 aa11.6□□□□□ -0.55
SMC3-201ENST00000361804 ASIC2Q16515 512 aa11.6□□□□□ -0.55
SMC3-201ENST00000361804 EFCAB13Q8IY85 973 aa11.6□□□□□ -0.55
SMC3-201ENST00000361804 GANQ9H2C0 597 aa11.6□□□□□ -0.55
SMC3-201ENST00000361804 KCTD10Q9H3F6 313 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms