RNA–Protein interactions for RNA: ENST00000360439.8

SIN3A-201, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 5,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-201ENST00000360439 KCNJ14Q9UNX9 436 aa10.8□□□□□ -0.68
SIN3A-201ENST00000360439 CHMP2BQ9UQN3 213 aa10.8□□□□□ -0.68
SIN3A-201ENST00000360439 SMCO2A6NFE2 343 aa10.8□□□□□ -0.68
SIN3A-201ENST00000360439 CCNT1O60563 726 aaKnown RBP10.8□□□□□ -0.68
SIN3A-201ENST00000360439 LGR5O75473 907 aa10.8□□□□□ -0.68
SIN3A-201ENST00000360439 PTPREP23469 700 aa10.8□□□□□ -0.68
SIN3A-201ENST00000360439 KIAA0753Q2KHM9 967 aa10.8□□□□□ -0.68
SIN3A-201ENST00000360439 ZNF280CQ8ND82 737 aa10.8□□□□□ -0.68
SIN3A-201ENST00000360439 AGBL3Q8NEM8 1001 aa10.8□□□□□ -0.68
SIN3A-201ENST00000360439 NAP1L4Q99733 375 aaKnown RBP10.8□□□□□ -0.68
SIN3A-201ENST00000360439 ZC4H2Q9NQZ6 224 aa10.8□□□□□ -0.68
SIN3A-201ENST00000360439 ZNF70Q9UC06 446 aaPredicted RBP10.8□□□□□ -0.68
SIN3A-201ENST00000360439 RWDD2AQ9UIY3 292 aa10.8□□□□□ -0.68
SIN3A-201ENST00000360439 ZNF142P52746 1687 aaPredicted RBP10.8□□□□□ -0.68
SIN3A-201ENST00000360439 KCNJ18B7U540 433 aa10.79□□□□□ -0.68
SIN3A-201ENST00000360439 COQ9O75208 318 aa10.79□□□□□ -0.68
SIN3A-201ENST00000360439 NAT2P11245 290 aa10.79□□□□□ -0.68
SIN3A-201ENST00000360439 CCT6AP40227 531 aaKnown RBP10.79□□□□□ -0.68
SIN3A-201ENST00000360439 KCNJ12Q14500 433 aa10.79□□□□□ -0.68
SIN3A-201ENST00000360439 SEPT2Q15019 361 aa10.79□□□□□ -0.68
SIN3A-201ENST00000360439 TRMT44Q8IYL2 757 aaKnown RBP10.79□□□□□ -0.68
SIN3A-201ENST00000360439 CCDC155Q8N6L0 562 aa10.79□□□□□ -0.68
SIN3A-201ENST00000360439 CUEDC2Q9H467 287 aa10.79□□□□□ -0.68
SIN3A-201ENST00000360439 AZI2Q9H6S1 392 aa10.79□□□□□ -0.68
SIN3A-201ENST00000360439 PSTPIP2Q9H939 334 aa10.79□□□□□ -0.68
SIN3A-201ENST00000360439 PRM3Q9NNZ6 103 aa10.79□□□□□ -0.68
SIN3A-201ENST00000360439 EME2A4GXA9 379 aaPredicted RBP10.79□□□□□ -0.68
SIN3A-201ENST00000360439 KRT14P02533 472 aa10.79□□□□□ -0.68
SIN3A-201ENST00000360439 FLT3P36888 993 aa10.79□□□□□ -0.68
SIN3A-201ENST00000360439 GSCP56915 257 aaPredicted RBP10.79□□□□□ -0.68
SIN3A-201ENST00000360439 ZNF483Q8TF39 744 aaPredicted RBP10.79□□□□□ -0.68
SIN3A-201ENST00000360439 MLXIPQ9HAP2 919 aa10.79□□□□□ -0.68
SIN3A-201ENST00000360439 DCP1AQ9NPI6 582 aaPredicted RBP10.79□□□□□ -0.68
SIN3A-201ENST00000360439 LAD1O00515 517 aa10.79□□□□□ -0.68
SIN3A-201ENST00000360439 AKR1B10O60218 316 aa10.79□□□□□ -0.68
SIN3A-201ENST00000360439 MYCLP1P12525 358 aaPredicted RBP10.79□□□□□ -0.68
SIN3A-201ENST00000360439 ATP1A2P50993 1020 aa10.79□□□□□ -0.68
SIN3A-201ENST00000360439 STAT2P52630 851 aa10.79□□□□□ -0.68
SIN3A-201ENST00000360439 GPATCH4Q5T3I0 446 aaKnown RBP10.79□□□□□ -0.68
SIN3A-201ENST00000360439 FOXR1Q6PIV2 292 aa10.79□□□□□ -0.68
SIN3A-201ENST00000360439 REXO1Q8N1G1 1221 aaKnown RBP10.79□□□□□ -0.68
SIN3A-201ENST00000360439 RETREG2Q8NC44 543 aa10.79□□□□□ -0.68
SIN3A-201ENST00000360439 NSUN4Q96CB9 384 aaKnown RBP10.79□□□□□ -0.68
SIN3A-201ENST00000360439 C6orf203Q9P0P8 240 aaPredicted RBP10.79□□□□□ -0.68
SIN3A-201ENST00000360439 DSEQ9UL01 958 aa10.79□□□□□ -0.68
SIN3A-201ENST00000360439 GCOM1H8Y6P7 765 aaPredicted RBP10.79□□□□□ -0.68
SIN3A-201ENST00000360439 POLR2MP0CAP2 368 aa10.79□□□□□ -0.68
SIN3A-201ENST00000360439 KRT9P35527 623 aa10.79□□□□□ -0.68
SIN3A-201ENST00000360439 MAP1SQ66K74 1059 aaPredicted RBP10.79□□□□□ -0.68
SIN3A-201ENST00000360439 OLFML2BQ68BL8 750 aa10.79□□□□□ -0.68
SIN3A-201ENST00000360439 USP17L2Q6R6M4 530 aa10.79□□□□□ -0.68
SIN3A-201ENST00000360439 TXNRD3Q86VQ6 643 aa10.79□□□□□ -0.68
SIN3A-201ENST00000360439 OR8K1Q8NGG5 319 aa10.79□□□□□ -0.68
SIN3A-201ENST00000360439 CEP70Q8NHQ1 597 aa10.79□□□□□ -0.68
SIN3A-201ENST00000360439 GLG1Q92896 1179 aa10.79□□□□□ -0.68
SIN3A-201ENST00000360439 FGD4Q96M96 766 aa10.79□□□□□ -0.68
SIN3A-201ENST00000360439 OSBPL1AQ9BXW6 950 aa10.79□□□□□ -0.68
SIN3A-201ENST00000360439 CNGB3Q9NQW8 809 aa10.79□□□□□ -0.68
SIN3A-201ENST00000360439 TMEM110-MUSTN1A8MSY1 372 aa10.78□□□□□ -0.68
SIN3A-201ENST00000360439 BTBD18B2RXH4 712 aa10.78□□□□□ -0.68
SIN3A-201ENST00000360439 USP17L10C9JJH3 530 aa10.78□□□□□ -0.68
SIN3A-201ENST00000360439 E7EVH7 732 aa10.78□□□□□ -0.68
SIN3A-201ENST00000360439 HIP1RO75146 1068 aa10.78□□□□□ -0.68
SIN3A-201ENST00000360439 EEF1GP26641 437 aaKnown RBP10.78□□□□□ -0.68
SIN3A-201ENST00000360439 ARPC4P59998 168 aa10.78□□□□□ -0.68
SIN3A-201ENST00000360439 LONRF3Q496Y0 759 aa10.78□□□□□ -0.68
SIN3A-201ENST00000360439 CFAP157Q5JU67 520 aa10.78□□□□□ -0.68
SIN3A-201ENST00000360439 FBXO33Q7Z6M2 555 aa10.78□□□□□ -0.68
SIN3A-201ENST00000360439 ANKS4BQ8N8V4 417 aa10.78□□□□□ -0.68
SIN3A-201ENST00000360439 KAZALD1Q96I82 304 aa10.78□□□□□ -0.68
SIN3A-201ENST00000360439 ADARB2Q9NS39 739 aaKnown RBP10.78□□□□□ -0.68
SIN3A-201ENST00000360439 P4HA2O15460 535 aa10.78□□□□□ -0.68
SIN3A-201ENST00000360439 GFAPP14136 432 aa10.78□□□□□ -0.68
SIN3A-201ENST00000360439 HPDP32754 393 aaPredicted RBP10.78□□□□□ -0.68
SIN3A-201ENST00000360439 VAV2P52735 878 aa10.78□□□□□ -0.68
SIN3A-201ENST00000360439 ASIC1P78348 528 aa10.78□□□□□ -0.68
SIN3A-201ENST00000360439 PDE4DQ08499 809 aa10.78□□□□□ -0.68
SIN3A-201ENST00000360439 ZNF394Q53GI3 561 aa10.78□□□□□ -0.68
SIN3A-201ENST00000360439 GJC2Q5T442 439 aaPredicted RBP10.78□□□□□ -0.68
SIN3A-201ENST00000360439 STXBP4Q6ZWJ1 553 aa10.78□□□□□ -0.68
SIN3A-201ENST00000360439 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.78□□□□□ -0.68
SIN3A-201ENST00000360439 TEKT4Q8WW24 435 aa10.78□□□□□ -0.68
SIN3A-201ENST00000360439 GPKOWQ92917 476 aaPredicted RBP eCLIP10.78□□□□□ -0.681e-6■■■■□ 23.9
SIN3A-201ENST00000360439 ARPC5LQ9BPX5 153 aa10.78□□□□□ -0.68
SIN3A-201ENST00000360439 CSRNP2Q9H175 543 aa10.78□□□□□ -0.68
SIN3A-201ENST00000360439 SAR1BQ9Y6B6 198 aa10.78□□□□□ -0.68
SIN3A-201ENST00000360439 SALL1Q9NSC2 1324 aa10.78□□□□□ -0.68
SIN3A-201ENST00000360439 TADA3O75528 432 aa10.78□□□□□ -0.68
SIN3A-201ENST00000360439 TXKP42681 527 aa10.78□□□□□ -0.68
SIN3A-201ENST00000360439 CTCFP49711 727 aaPredicted RBP10.78□□□□□ -0.68
SIN3A-201ENST00000360439 DNM2P50570 870 aa10.78□□□□□ -0.68
SIN3A-201ENST00000360439 KLC1Q07866 573 aa10.78□□□□□ -0.68
SIN3A-201ENST00000360439 NONOQ15233 471 aaKnown RBP eCLIP10.78□□□□□ -0.685e-7■■■■■ 27.1
SIN3A-201ENST00000360439 MUM1Q2TAK8 710 aa10.78□□□□□ -0.68
SIN3A-201ENST00000360439 TDRD12Q587J7 1177 aaKnown RBP10.78□□□□□ -0.68
SIN3A-201ENST00000360439 MCF2L2Q86YR7 1114 aa10.78□□□□□ -0.68
SIN3A-201ENST00000360439 TMEM39BQ9GZU3 492 aa10.78□□□□□ -0.68
SIN3A-201ENST00000360439 METTL14Q9HCE5 456 aaKnown RBP10.78□□□□□ -0.68
SIN3A-201ENST00000360439 SEPT11Q9NVA2 429 aaKnown RBP10.78□□□□□ -0.68
SIN3A-201ENST00000360439 PRPF3O43395 683 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms