RNA–Protein interactions for RNA: ENST00000359446.9

LDLRAD4-201, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD4, Length 8,486 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-201ENST00000359446 PFDN1O60925 122 aa13.7□□□□□ -0.22
LDLRAD4-201ENST00000359446 DYNLL1P63167 89 aaKnown RBP13.7□□□□□ -0.22
LDLRAD4-201ENST00000359446 TMEM259Q4ZIN3 620 aa13.7□□□□□ -0.22
LDLRAD4-201ENST00000359446 CTNND1O60716 968 aaKnown RBP13.7□□□□□ -0.22
LDLRAD4-201ENST00000359446 EPHB4P54760 987 aa13.7□□□□□ -0.22
LDLRAD4-201ENST00000359446 SURF1Q15526 300 aa13.7□□□□□ -0.22
LDLRAD4-201ENST00000359446 TBCCQ15814 346 aa13.7□□□□□ -0.22
LDLRAD4-201ENST00000359446 ACBD5Q5T8D3 534 aaPredicted RBP13.7□□□□□ -0.22
LDLRAD4-201ENST00000359446 ELMOD1Q8N336 334 aa13.7□□□□□ -0.22
LDLRAD4-201ENST00000359446 CEP19Q96LK0 163 aa13.7□□□□□ -0.22
LDLRAD4-201ENST00000359446 FSD1LQ9BXM9 530 aa13.7□□□□□ -0.22
LDLRAD4-201ENST00000359446 ZWILCHQ9H900 591 aa13.7□□□□□ -0.22
LDLRAD4-201ENST00000359446 CFLARO15519 480 aa13.7□□□□□ -0.22
LDLRAD4-201ENST00000359446 PYGLP06737 847 aa13.7□□□□□ -0.22
LDLRAD4-201ENST00000359446 HSPA6P17066 643 aa13.7□□□□□ -0.22
LDLRAD4-201ENST00000359446 BZW1Q7L1Q6 419 aaKnown RBP13.7□□□□□ -0.22
LDLRAD4-201ENST00000359446 SRRM1Q8IYB3 904 aaKnown RBP13.7□□□□□ -0.22
LDLRAD4-201ENST00000359446 PYROXD1Q8WU10 500 aa13.7□□□□□ -0.22
LDLRAD4-201ENST00000359446 PBKQ96KB5 322 aa13.7□□□□□ -0.22
LDLRAD4-201ENST00000359446 SERPINI1Q99574 410 aa13.7□□□□□ -0.22
LDLRAD4-201ENST00000359446 PNMA3Q9UL41 463 aa13.7□□□□□ -0.22
LDLRAD4-201ENST00000359446 MXI1P50539 228 aa13.7□□□□□ -0.22
LDLRAD4-201ENST00000359446 DRP2Q13474 957 aa13.7□□□□□ -0.22
LDLRAD4-201ENST00000359446 FBXO41Q8TF61 875 aa13.7□□□□□ -0.22
LDLRAD4-201ENST00000359446 PDCD6IPQ8WUM4 868 aaKnown RBP13.7□□□□□ -0.22
LDLRAD4-201ENST00000359446 RABGGTAQ92696 567 aa13.7□□□□□ -0.22
LDLRAD4-201ENST00000359446 MOCS3O95396 460 aa13.7□□□□□ -0.22
LDLRAD4-201ENST00000359446 PSMA2P25787 234 aa13.7□□□□□ -0.22
LDLRAD4-201ENST00000359446 MRFAP1L1Q96HT8 127 aa13.7□□□□□ -0.22
LDLRAD4-201ENST00000359446 HPCAL4Q9UM19 191 aa13.7□□□□□ -0.22
LDLRAD4-201ENST00000359446 CAPRIN1Q14444 709 aaKnown RBP13.69□□□□□ -0.22
LDLRAD4-201ENST00000359446 LZICQ8WZA0 190 aa13.69□□□□□ -0.22
LDLRAD4-201ENST00000359446 NSUN2Q08J23 767 aaKnown RBP eCLIP13.69□□□□□ -0.22
LDLRAD4-201ENST00000359446 MSTO1Q9BUK6 570 aa13.69□□□□□ -0.22
LDLRAD4-201ENST00000359446 EIF2AQ9BY44 585 aaKnown RBP13.69□□□□□ -0.22
LDLRAD4-201ENST00000359446 TXLNGQ9NUQ3 528 aa13.69□□□□□ -0.22
LDLRAD4-201ENST00000359446 CDC23Q9UJX2 597 aa13.69□□□□□ -0.22
LDLRAD4-201ENST00000359446 G3BP2Q9UN86 482 aaKnown RBP13.69□□□□□ -0.22
LDLRAD4-201ENST00000359446 HOXA13P31271 388 aaPredicted RBP13.69□□□□□ -0.22
LDLRAD4-201ENST00000359446 RECQLP46063 649 aaPredicted RBP13.69□□□□□ -0.22
LDLRAD4-201ENST00000359446 GOLGA8FQ08AF8 430 aa13.69□□□□□ -0.22
LDLRAD4-201ENST00000359446 GOLGA8DPQ0D2H9 430 aa13.69□□□□□ -0.22
LDLRAD4-201ENST00000359446 THEM5Q8N1Q8 247 aa13.69□□□□□ -0.22
LDLRAD4-201ENST00000359446 N4BP2L2Q92802 583 aaPredicted RBP13.69□□□□□ -0.22
LDLRAD4-201ENST00000359446 TRAIPQ9BWF2 469 aa13.69□□□□□ -0.22
LDLRAD4-201ENST00000359446 FAM49AQ9H0Q0 323 aaPredicted RBP13.69□□□□□ -0.22
LDLRAD4-201ENST00000359446 FTCDO95954 541 aa13.69□□□□□ -0.22
LDLRAD4-201ENST00000359446 FAM133BQ5BKY9 247 aaKnown RBP13.69□□□□□ -0.22
LDLRAD4-201ENST00000359446 APOA5Q6Q788 366 aa13.69□□□□□ -0.22
LDLRAD4-201ENST00000359446 DONSONQ9NYP3 566 aa13.69□□□□□ -0.22
LDLRAD4-201ENST00000359446 PCDHA5Q9Y5H7 936 aa13.69□□□□□ -0.22
LDLRAD4-201ENST00000359446 CIAO1O76071 339 aa13.69□□□□□ -0.22
LDLRAD4-201ENST00000359446 SERPING1P05155 500 aa13.69□□□□□ -0.22
LDLRAD4-201ENST00000359446 EEF1DP29692 281 aaKnown RBP13.69□□□□□ -0.22
LDLRAD4-201ENST00000359446 ZBTB17Q13105 803 aa13.69□□□□□ -0.22
LDLRAD4-201ENST00000359446 PIGSQ96S52 555 aa13.69□□□□□ -0.22
LDLRAD4-201ENST00000359446 TRIM15Q9C019 465 aa13.69□□□□□ -0.22
LDLRAD4-201ENST00000359446 MYL3P08590 195 aa13.69□□□□□ -0.22
LDLRAD4-201ENST00000359446 ERFEQ4G0M1 354 aa13.69□□□□□ -0.22
LDLRAD4-201ENST00000359446 SLC10A4Q96EP9 437 aa13.69□□□□□ -0.22
LDLRAD4-201ENST00000359446 ZNF341Q9BYN7 854 aa13.69□□□□□ -0.22
LDLRAD4-201ENST00000359446 UPF3AQ9H1J1 476 aaKnown RBP13.69□□□□□ -0.22
LDLRAD4-201ENST00000359446 ABCC4O15439 1325 aa13.68□□□□□ -0.22
LDLRAD4-201ENST00000359446 MAP3K7O43318 606 aa13.68□□□□□ -0.22
LDLRAD4-201ENST00000359446 PLA2G4BP0C869 781 aa13.68□□□□□ -0.22
LDLRAD4-201ENST00000359446 PLCG1P19174 1290 aa13.68□□□□□ -0.22
LDLRAD4-201ENST00000359446 GPT2Q8TD30 523 aa13.68□□□□□ -0.22
LDLRAD4-201ENST00000359446 NHEJ1Q9H9Q4 299 aaPredicted RBP13.68□□□□□ -0.22
LDLRAD4-201ENST00000359446 IFNA8P32881 189 aa13.68□□□□□ -0.22
LDLRAD4-201ENST00000359446 GRAMD1CQ8IYS0 662 aa13.68□□□□□ -0.22
LDLRAD4-201ENST00000359446 ASAP1Q9ULH1 1129 aa13.68□□□□□ -0.22
LDLRAD4-201ENST00000359446 USP17L3A6NCW0 530 aa13.68□□□□□ -0.22
LDLRAD4-201ENST00000359446 USP17L4A6NCW7 530 aa13.68□□□□□ -0.22
LDLRAD4-201ENST00000359446 ESRRBO95718 433 aa13.68□□□□□ -0.22
LDLRAD4-201ENST00000359446 DHX9Q08211 1270 aaKnown RBP13.68□□□□□ -0.22
LDLRAD4-201ENST00000359446 SLC39A14Q15043 492 aa13.68□□□□□ -0.22
LDLRAD4-201ENST00000359446 USP17L1Q7RTZ2 530 aa13.68□□□□□ -0.22
LDLRAD4-201ENST00000359446 OR6B3Q8NGW1 331 aa13.68□□□□□ -0.22
LDLRAD4-201ENST00000359446 NCLNQ969V3 563 aa13.68□□□□□ -0.22
LDLRAD4-201ENST00000359446 DHX36Q9H2U1 1008 aaKnown RBP13.68□□□□□ -0.22
LDLRAD4-201ENST00000359446 FAM95CA0A1B0GW59 222 aa13.68□□□□□ -0.22
LDLRAD4-201ENST00000359446 NEMP1O14524 444 aa13.68□□□□□ -0.22
LDLRAD4-201ENST00000359446 FAM196AQ6ZSG2 479 aa13.68□□□□□ -0.22
LDLRAD4-201ENST00000359446 IL17REQ8NFR9 667 aa13.68□□□□□ -0.22
LDLRAD4-201ENST00000359446 IQANK1A0A1B0GTG1 560 aa13.68□□□□□ -0.22
LDLRAD4-201ENST00000359446 SERPINB2P05120 415 aa13.68□□□□□ -0.22
LDLRAD4-201ENST00000359446 CENPUQ71F23 418 aa13.68□□□□□ -0.22
LDLRAD4-201ENST00000359446 FTOQ9C0B1 505 aaKnown RBP eCLIP13.68□□□□□ -0.22
LDLRAD4-201ENST00000359446 TRPC5Q9UL62 973 aaPredicted RBP13.68□□□□□ -0.22
LDLRAD4-201ENST00000359446 ADAMTS12P58397 1594 aa13.68□□□□□ -0.22
LDLRAD4-201ENST00000359446 TJP3O95049 919 aa13.68□□□□□ -0.22
LDLRAD4-201ENST00000359446 SYF2O95926 243 aaKnown RBP13.68□□□□□ -0.22
LDLRAD4-201ENST00000359446 CDC25BP30305 580 aa13.68□□□□□ -0.22
LDLRAD4-201ENST00000359446 TAF1BQ53T94 588 aaPredicted RBP13.68□□□□□ -0.22
LDLRAD4-201ENST00000359446 MAN1B1Q9UKM7 699 aa13.68□□□□□ -0.22
LDLRAD4-201ENST00000359446 PUS3Q9BZE2 481 aaKnown RBP13.68□□□□□ -0.22
LDLRAD4-201ENST00000359446 BBOX1O75936 387 aa13.67□□□□□ -0.22
LDLRAD4-201ENST00000359446 MYL1P05976 194 aa13.67□□□□□ -0.22
LDLRAD4-201ENST00000359446 UBE2SQ16763 222 aa13.67□□□□□ -0.22
LDLRAD4-201ENST00000359446 TMC4Q7Z404 712 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms