RNA–Protein interactions for RNA: ENST00000358971.7

SEPSECS-201, Transcript of Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase, humanhuman

TSL 1 (best)

Gene SEPSECS, Length 3,344 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEPSECS-201ENST00000358971 CDK17Q00537 523 aa12.38□□□□□ -0.43
SEPSECS-201ENST00000358971 SNX30Q5VWJ9 437 aa12.38□□□□□ -0.43
SEPSECS-201ENST00000358971 UHMK1Q8TAS1 419 aaKnown RBP12.38□□□□□ -0.43
SEPSECS-201ENST00000358971 FAM207AQ9NSI2 230 aaPredicted RBP12.38□□□□□ -0.43
SEPSECS-201ENST00000358971 MYH6P13533 1939 aa12.38□□□□□ -0.43
SEPSECS-201ENST00000358971 CCDC169A6NNP5 214 aa12.38□□□□□ -0.43
SEPSECS-201ENST00000358971 ZNF213O14771 459 aa12.38□□□□□ -0.43
SEPSECS-201ENST00000358971 FGAP02671 866 aa12.38□□□□□ -0.43
SEPSECS-201ENST00000358971 MYBP10242 640 aa12.38□□□□□ -0.43
SEPSECS-201ENST00000358971 SLCO1A2P46721 670 aa12.38□□□□□ -0.43
SEPSECS-201ENST00000358971 SLC4A8Q2Y0W8 1093 aa12.38□□□□□ -0.43
SEPSECS-201ENST00000358971 SLC44A4Q53GD3 710 aa12.38□□□□□ -0.43
SEPSECS-201ENST00000358971 TDRD12Q587J7 1177 aaKnown RBP12.38□□□□□ -0.43
SEPSECS-201ENST00000358971 INTS8Q75QN2 995 aaKnown RBP12.38□□□□□ -0.43
SEPSECS-201ENST00000358971 SLF2Q8IX21 1173 aa12.38□□□□□ -0.43
SEPSECS-201ENST00000358971 STAG2Q8N3U4 1231 aa12.38□□□□□ -0.43
SEPSECS-201ENST00000358971 HAUS1Q96CS2 278 aa12.38□□□□□ -0.43
SEPSECS-201ENST00000358971 DYDC2Q96IM9 177 aa12.38□□□□□ -0.43
SEPSECS-201ENST00000358971 CENPKQ9BS16 269 aa12.38□□□□□ -0.43
SEPSECS-201ENST00000358971 METTL5Q9NRN9 209 aaKnown RBP12.38□□□□□ -0.43
SEPSECS-201ENST00000358971 XDHP47989 1333 aa12.38□□□□□ -0.43
SEPSECS-201ENST00000358971 CAPN15O75808 1086 aa12.37□□□□□ -0.43
SEPSECS-201ENST00000358971 CCNB1P14635 433 aa12.37□□□□□ -0.43
SEPSECS-201ENST00000358971 PMS1P54277 932 aaKnown RBP12.37□□□□□ -0.43
SEPSECS-201ENST00000358971 CCDC152Q4G0S7 254 aa12.37□□□□□ -0.43
SEPSECS-201ENST00000358971 APOA5Q6Q788 366 aa12.37□□□□□ -0.43
SEPSECS-201ENST00000358971 ENDOVQ8N8Q3 282 aaKnown RBP12.37□□□□□ -0.43
SEPSECS-201ENST00000358971 PPFIBP2Q8ND30 876 aa12.37□□□□□ -0.43
SEPSECS-201ENST00000358971 LENG1Q96BZ8 264 aaPredicted RBP12.37□□□□□ -0.43
SEPSECS-201ENST00000358971 MLXIPLQ9NP71 852 aa12.37□□□□□ -0.43
SEPSECS-201ENST00000358971 LARSQ9P2J5 1176 aaKnown RBP12.37□□□□□ -0.43
SEPSECS-201ENST00000358971 CIDEBQ9UHD4 219 aa12.37□□□□□ -0.43
SEPSECS-201ENST00000358971 AMACRQ9UHK6 382 aa12.37□□□□□ -0.43
SEPSECS-201ENST00000358971 PLAGL2Q9UPG8 496 aa12.37□□□□□ -0.43
SEPSECS-201ENST00000358971 ZNF711Q9Y462 761 aa12.37□□□□□ -0.43
SEPSECS-201ENST00000358971 PCDH11XQ9BZA7 1347 aa12.37□□□□□ -0.43
SEPSECS-201ENST00000358971 TRIM75PA6NK02 468 aa12.37□□□□□ -0.43
SEPSECS-201ENST00000358971 O00370 1275 aa12.37□□□□□ -0.43
SEPSECS-201ENST00000358971 RNF113AO15541 343 aaKnown RBP12.37□□□□□ -0.43
SEPSECS-201ENST00000358971 ITGA2BP08514 1039 aa12.37□□□□□ -0.43
SEPSECS-201ENST00000358971 AIMP1Q12904 312 aaKnown RBP12.37□□□□□ -0.43
SEPSECS-201ENST00000358971 PTPROQ16827 1216 aa12.37□□□□□ -0.43
SEPSECS-201ENST00000358971 KSR2Q6VAB6 950 aa12.37□□□□□ -0.43
SEPSECS-201ENST00000358971 MAP7D3Q8IWC1 876 aa12.37□□□□□ -0.43
SEPSECS-201ENST00000358971 AGGF1Q8N302 714 aaeCLIP12.37□□□□□ -0.43
SEPSECS-201ENST00000358971 SPIRE2Q8WWL2 714 aa12.37□□□□□ -0.43
SEPSECS-201ENST00000358971 AGBL1Q96MI9 1066 aa12.37□□□□□ -0.43
SEPSECS-201ENST00000358971 NOC4LQ9BVI4 516 aaKnown RBP12.37□□□□□ -0.43
SEPSECS-201ENST00000358971 MIS12Q9H081 205 aa12.37□□□□□ -0.43
SEPSECS-201ENST00000358971 BRD8Q9H0E9 1235 aa12.37□□□□□ -0.43
SEPSECS-201ENST00000358971 DCLRE1BQ9H816 532 aa12.37□□□□□ -0.43
SEPSECS-201ENST00000358971 FAM114A2Q9NRY5 505 aa12.37□□□□□ -0.43
SEPSECS-201ENST00000358971 CLTCQ00610 1675 aaKnown RBP12.37□□□□□ -0.43
SEPSECS-201ENST00000358971 OAS1P00973 400 aaKnown RBP12.37□□□□□ -0.43
SEPSECS-201ENST00000358971 AFPP02771 609 aaKnown RBP12.37□□□□□ -0.43
SEPSECS-201ENST00000358971 RASA1P20936 1047 aa12.37□□□□□ -0.43
SEPSECS-201ENST00000358971 TARSP26639 723 aaKnown RBP12.37□□□□□ -0.43
SEPSECS-201ENST00000358971 GUCY1A2P33402 732 aa12.37□□□□□ -0.43
SEPSECS-201ENST00000358971 SH3BGRP55822 239 aaPredicted RBP12.37□□□□□ -0.43
SEPSECS-201ENST00000358971 PLOD1Q02809 727 aaPredicted RBP12.37□□□□□ -0.43
SEPSECS-201ENST00000358971 BTG3Q14201 252 aaPredicted RBP12.37□□□□□ -0.43
SEPSECS-201ENST00000358971 PARP6Q2NL67 630 aa12.37□□□□□ -0.43
SEPSECS-201ENST00000358971 DENND2CQ68D51 928 aa12.37□□□□□ -0.43
SEPSECS-201ENST00000358971 RRAGAQ7L523 313 aa12.37□□□□□ -0.43
SEPSECS-201ENST00000358971 HAO1Q9UJM8 370 aa12.37□□□□□ -0.43
SEPSECS-201ENST00000358971 TMEM98Q9Y2Y6 226 aa12.37□□□□□ -0.43
SEPSECS-201ENST00000358971 CYP1A1P04798 512 aaPredicted RBP12.36□□□□□ -0.43
SEPSECS-201ENST00000358971 RPN1P04843 607 aaKnown RBP12.36□□□□□ -0.43
SEPSECS-201ENST00000358971 SERPINB3P29508 390 aa12.36□□□□□ -0.43
SEPSECS-201ENST00000358971 ZNF554Q86TJ5 538 aa12.36□□□□□ -0.43
SEPSECS-201ENST00000358971 CSGALNACT2Q8N6G5 542 aa12.36□□□□□ -0.43
SEPSECS-201ENST00000358971 CTNNBL1Q8WYA6 563 aaPredicted RBP12.36□□□□□ -0.43
SEPSECS-201ENST00000358971 WASF1Q92558 559 aa12.36□□□□□ -0.43
SEPSECS-201ENST00000358971 CCDC134Q9H6E4 229 aa12.36□□□□□ -0.43
SEPSECS-201ENST00000358971 MMRN2Q9H8L6 949 aa12.36□□□□□ -0.43
SEPSECS-201ENST00000358971 DENND2AQ9ULE3 1009 aa12.36□□□□□ -0.43
SEPSECS-201ENST00000358971 IQSEC3Q9UPP2 1182 aaPredicted RBP12.36□□□□□ -0.43
SEPSECS-201ENST00000358971 CPS1P31327 1500 aa12.36□□□□□ -0.43
SEPSECS-201ENST00000358971 ASLP04424 464 aa12.36□□□□□ -0.43
SEPSECS-201ENST00000358971 NAT1P18440 290 aa12.36□□□□□ -0.43
SEPSECS-201ENST00000358971 EPHB2P29323 1055 aa12.36□□□□□ -0.43
SEPSECS-201ENST00000358971 CA8P35219 290 aa12.36□□□□□ -0.43
SEPSECS-201ENST00000358971 MLH1P40692 756 aa12.36□□□□□ -0.43
SEPSECS-201ENST00000358971 SKIV2L2P42285 1042 aaKnown RBP12.36□□□□□ -0.43
SEPSECS-201ENST00000358971 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.36□□□□□ -0.43
SEPSECS-201ENST00000358971 LIN52Q52LA3 116 aa12.36□□□□□ -0.43
SEPSECS-201ENST00000358971 TBC1D16Q8TBP0 767 aa12.36□□□□□ -0.43
SEPSECS-201ENST00000358971 OXER1Q8TDS5 423 aa12.36□□□□□ -0.43
SEPSECS-201ENST00000358971 NCSTNQ92542 709 aa12.36□□□□□ -0.43
SEPSECS-201ENST00000358971 EYA1Q99502 592 aa12.36□□□□□ -0.43
SEPSECS-201ENST00000358971 FMO2Q99518 471 aa12.36□□□□□ -0.43
SEPSECS-201ENST00000358971 CEP170BQ9Y4F5 1589 aaPredicted RBP12.36□□□□□ -0.43
SEPSECS-201ENST00000358971 TRIM43BA6NCK2 446 aa12.36□□□□□ -0.43
SEPSECS-201ENST00000358971 GTPBP6O43824 516 aaPredicted RBP12.36□□□□□ -0.43
SEPSECS-201ENST00000358971 GJB6O95452 261 aa12.36□□□□□ -0.43
SEPSECS-201ENST00000358971 KPNB1Q14974 876 aaKnown RBP12.36□□□□□ -0.43
SEPSECS-201ENST00000358971 MAP7D1Q3KQU3 841 aa12.36□□□□□ -0.43
SEPSECS-201ENST00000358971 CFAP157Q5JU67 520 aa12.36□□□□□ -0.43
SEPSECS-201ENST00000358971 ZNF449Q6P9G9 518 aa12.36□□□□□ -0.43
SEPSECS-201ENST00000358971 GATA6Q92908 595 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms