RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 EPHX2P34913 555 aa14.02□□□□□ -0.17
GGPS1-202ENST00000358966 GSDMDP57764 484 aa14.02□□□□□ -0.17
GGPS1-202ENST00000358966 SP4Q02446 784 aa14.02□□□□□ -0.17
GGPS1-202ENST00000358966 RBL2Q08999 1139 aa14.02□□□□□ -0.17
GGPS1-202ENST00000358966 FSTL1Q12841 308 aa14.02□□□□□ -0.17
GGPS1-202ENST00000358966 MAEAQ7L5Y9 396 aa14.02□□□□□ -0.17
GGPS1-202ENST00000358966 TC2NQ8N9U0 490 aa14.02□□□□□ -0.17
GGPS1-202ENST00000358966 TMOD4Q9NZQ9 345 aa14.02□□□□□ -0.17
GGPS1-202ENST00000358966 B4DLN1 442 aa14.01□□□□□ -0.17
GGPS1-202ENST00000358966 CCNE1P24864 410 aa14.01□□□□□ -0.17
GGPS1-202ENST00000358966 MAP3K9P80192 1104 aa14.01□□□□□ -0.17
GGPS1-202ENST00000358966 EHHADHQ08426 723 aa14.01□□□□□ -0.17
GGPS1-202ENST00000358966 SEMA3FQ13275 785 aa14.01□□□□□ -0.17
GGPS1-202ENST00000358966 COG2Q14746 738 aa14.01□□□□□ -0.17
GGPS1-202ENST00000358966 PGM5Q15124 567 aa14.01□□□□□ -0.17
GGPS1-202ENST00000358966 E4F1Q66K89 784 aaPredicted RBP14.01□□□□□ -0.17
GGPS1-202ENST00000358966 GADL1Q6ZQY3 521 aa14.01□□□□□ -0.17
GGPS1-202ENST00000358966 CATSPERGQ6ZRH7 1159 aa14.01□□□□□ -0.17
GGPS1-202ENST00000358966 CCDC47Q96A33 483 aaKnown RBP14.01□□□□□ -0.17
GGPS1-202ENST00000358966 CDCA5Q96FF9 252 aa14.01□□□□□ -0.17
GGPS1-202ENST00000358966 DNM3Q9UQ16 869 aa14.01□□□□□ -0.17
GGPS1-202ENST00000358966 SH3BP1Q9Y3L3 701 aa14.01□□□□□ -0.17
GGPS1-202ENST00000358966 WDR90Q96KV7 1748 aa14.01□□□□□ -0.17
GGPS1-202ENST00000358966 TRAF5O00463 557 aa14.01□□□□□ -0.17
GGPS1-202ENST00000358966 FXR1P51114 621 aaKnown RBP eCLIP14.01□□□□□ -0.17
GGPS1-202ENST00000358966 UBXN1Q04323 297 aa14.01□□□□□ -0.17
GGPS1-202ENST00000358966 TRAF1Q13077 416 aa14.01□□□□□ -0.17
GGPS1-202ENST00000358966 TBX2Q13207 712 aaPredicted RBP14.01□□□□□ -0.17
GGPS1-202ENST00000358966 MTF1Q14872 753 aa14.01□□□□□ -0.17
GGPS1-202ENST00000358966 TKFCQ3LXA3 575 aa14.01□□□□□ -0.17
GGPS1-202ENST00000358966 FAM26FQ5R3K3 315 aa14.01□□□□□ -0.17
GGPS1-202ENST00000358966 ERMNQ8TAM6 284 aa14.01□□□□□ -0.17
GGPS1-202ENST00000358966 CNOT6LQ96LI5 555 aaKnown RBP14.01□□□□□ -0.17
GGPS1-202ENST00000358966 HSD17B14Q9BPX1 270 aa14.01□□□□□ -0.17
GGPS1-202ENST00000358966 PLCD4Q9BRC7 762 aa14.01□□□□□ -0.17
GGPS1-202ENST00000358966 SAMM50Q9Y512 469 aa14.01□□□□□ -0.17
GGPS1-202ENST00000358966 RPTORQ8N122 1335 aa14.01□□□□□ -0.17
GGPS1-202ENST00000358966 PPP1R12BO60237 982 aaPredicted RBP14□□□□□ -0.17
GGPS1-202ENST00000358966 CASP14P31944 242 aa14□□□□□ -0.17
GGPS1-202ENST00000358966 KCNA1Q09470 495 aa14□□□□□ -0.17
GGPS1-202ENST00000358966 MKRN3Q13064 507 aaKnown RBP14□□□□□ -0.17
GGPS1-202ENST00000358966 MTMR1Q13613 665 aa14□□□□□ -0.17
GGPS1-202ENST00000358966 ARHGEF16Q5VV41 709 aa14□□□□□ -0.17
GGPS1-202ENST00000358966 MCTP2Q6DN12 878 aa14□□□□□ -0.17
GGPS1-202ENST00000358966 SFR1Q86XK3 245 aa14□□□□□ -0.17
GGPS1-202ENST00000358966 KSR1Q8IVT5 923 aa14□□□□□ -0.17
GGPS1-202ENST00000358966 CCDC150Q8NCX0 1101 aa14□□□□□ -0.17
GGPS1-202ENST00000358966 ZNF397Q8NF99 534 aaPredicted RBP14□□□□□ -0.17
GGPS1-202ENST00000358966 CXorf56Q9H5V9 222 aa14□□□□□ -0.17
GGPS1-202ENST00000358966 RABGAP1Q9Y3P9 1069 aa14□□□□□ -0.17
GGPS1-202ENST00000358966 CSADQ9Y600 493 aa14□□□□□ -0.17
GGPS1-202ENST00000358966 GYPCP04921 128 aa14□□□□□ -0.17
GGPS1-202ENST00000358966 PBX1P40424 430 aa14□□□□□ -0.17
GGPS1-202ENST00000358966 GIT2Q14161 759 aa14□□□□□ -0.17
GGPS1-202ENST00000358966 DPY19L2Q6NUT2 758 aa14□□□□□ -0.17
GGPS1-202ENST00000358966 TMEM139Q8IV31 216 aa14□□□□□ -0.17
GGPS1-202ENST00000358966 PDCD2LQ9BRP1 358 aa14□□□□□ -0.17
GGPS1-202ENST00000358966 LXNQ9BS40 222 aa14□□□□□ -0.17
GGPS1-202ENST00000358966 DESI2Q9BSY9 194 aa14□□□□□ -0.17
GGPS1-202ENST00000358966 PAGR1Q9BTK6 254 aa14□□□□□ -0.17
GGPS1-202ENST00000358966 A1CFQ9NQ94 594 aaKnown RBP14□□□□□ -0.17
GGPS1-202ENST00000358966 PXMP2Q9NR77 195 aa14□□□□□ -0.17
GGPS1-202ENST00000358966 LIMA1Q9UHB6 759 aaKnown RBP14□□□□□ -0.17
GGPS1-202ENST00000358966 SUFUQ9UMX1 484 aa14□□□□□ -0.17
GGPS1-202ENST00000358966 PPP2R3BQ9Y5P8 575 aa14□□□□□ -0.17
GGPS1-202ENST00000358966 PVALEFA0A1B0GWK0 134 aa13.99□□□□□ -0.17
GGPS1-202ENST00000358966 MCF2L2Q86YR7 1114 aa13.99□□□□□ -0.17
GGPS1-202ENST00000358966 CCDC155Q8N6L0 562 aa13.99□□□□□ -0.17
GGPS1-202ENST00000358966 FAM212AQ96EL1 285 aa13.99□□□□□ -0.17
GGPS1-202ENST00000358966 SGSM3Q96HU1 749 aa13.99□□□□□ -0.17
GGPS1-202ENST00000358966 DHTKD1Q96HY7 919 aaPredicted RBP13.99□□□□□ -0.17
GGPS1-202ENST00000358966 GINM1Q9NU53 330 aa13.99□□□□□ -0.17
GGPS1-202ENST00000358966 PCDHA2Q9Y5H9 948 aa13.99□□□□□ -0.17
GGPS1-202ENST00000358966 PITPNM2Q9BZ72 1349 aa13.99□□□□□ -0.17
GGPS1-202ENST00000358966 A0A0U1RQJ8 604 aa13.99□□□□□ -0.17
GGPS1-202ENST00000358966 DHX15O43143 795 aaKnown RBP13.99□□□□□ -0.17
GGPS1-202ENST00000358966 CNTN2Q02246 1040 aa13.99□□□□□ -0.17
GGPS1-202ENST00000358966 MAP2K1Q02750 393 aaPredicted RBP13.99□□□□□ -0.17
GGPS1-202ENST00000358966 PPP2R5CQ13362 524 aa13.99□□□□□ -0.17
GGPS1-202ENST00000358966 SCFD1Q8WVM8 642 aa13.99□□□□□ -0.17
GGPS1-202ENST00000358966 ATRIPQ8WXE1 791 aa13.99□□□□□ -0.17
GGPS1-202ENST00000358966 ZNF592Q92610 1267 aa13.99□□□□□ -0.17
GGPS1-202ENST00000358966 C12orf42Q96LP6 360 aa13.99□□□□□ -0.17
GGPS1-202ENST00000358966 EHMT1Q9H9B1 1298 aa13.99□□□□□ -0.17
GGPS1-202ENST00000358966 BTBD7Q9P203 1132 aa13.99□□□□□ -0.17
GGPS1-202ENST00000358966 KIAA1217Q5T5P2 1943 aa13.99□□□□□ -0.17
GGPS1-202ENST00000358966 C19orf81C9J6K1 198 aa13.99□□□□□ -0.17
GGPS1-202ENST00000358966 MYBP10242 640 aa13.99□□□□□ -0.17
GGPS1-202ENST00000358966 UGCGQ16739 394 aa13.99□□□□□ -0.17
GGPS1-202ENST00000358966 NOL9Q5SY16 702 aaKnown RBP13.99□□□□□ -0.17
GGPS1-202ENST00000358966 MAP1SQ66K74 1059 aaPredicted RBP13.99□□□□□ -0.17
GGPS1-202ENST00000358966 CENPPQ6IPU0 288 aa13.99□□□□□ -0.17
GGPS1-202ENST00000358966 SYT2Q8N9I0 419 aaPredicted RBP13.99□□□□□ -0.17
GGPS1-202ENST00000358966 TUBGCP2Q9BSJ2 902 aa13.99□□□□□ -0.17
GGPS1-202ENST00000358966 TEKT3Q9BXF9 490 aa13.99□□□□□ -0.17
GGPS1-202ENST00000358966 SOWAHDA6NJG2 315 aa13.98□□□□□ -0.17
GGPS1-202ENST00000358966 PRPF6O94906 941 aaKnown RBP13.98□□□□□ -0.17
GGPS1-202ENST00000358966 FILIP1LQ4L180 1135 aa13.98□□□□□ -0.17
GGPS1-202ENST00000358966 PCNX4Q63HM2 1172 aa13.98□□□□□ -0.17
GGPS1-202ENST00000358966 AGO4Q9HCK5 861 aaKnown RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms