RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 TMEM266Q2M3C6 531 aa12.43□□□□□ -0.42
CNOT3-202ENST00000358389 TMC3Q7Z5M5 1100 aa12.43□□□□□ -0.42
CNOT3-202ENST00000358389 NELFCDQ8IXH7 590 aa12.43□□□□□ -0.42
CNOT3-202ENST00000358389 IQCDQ96DY2 449 aa12.43□□□□□ -0.42
CNOT3-202ENST00000358389 USP15Q9Y4E8 981 aaPredicted RBP12.43□□□□□ -0.42
CNOT3-202ENST00000358389 SLIT1O75093 1534 aa12.43□□□□□ -0.42
CNOT3-202ENST00000358389 SMIM22K7EJ46 135 aa12.43□□□□□ -0.42
CNOT3-202ENST00000358389 RFC4P35249 363 aa12.43□□□□□ -0.42
CNOT3-202ENST00000358389 TECP42680 631 aa12.43□□□□□ -0.42
CNOT3-202ENST00000358389 ITIH4Q14624 930 aa12.43□□□□□ -0.42
CNOT3-202ENST00000358389 MEI1Q5TIA1 1274 aa12.43□□□□□ -0.42
CNOT3-202ENST00000358389 EMC10Q5UCC4 262 aa12.43□□□□□ -0.42
CNOT3-202ENST00000358389 NBPF5PQ86XG9 351 aaPredicted RBP12.43□□□□□ -0.42
CNOT3-202ENST00000358389 BLIDQ8IZY5 108 aa12.43□□□□□ -0.42
CNOT3-202ENST00000358389 ANKS1AQ92625 1134 aa12.43□□□□□ -0.42
CNOT3-202ENST00000358389 L3MBTL3Q96JM7 780 aaPredicted RBP12.43□□□□□ -0.42
CNOT3-202ENST00000358389 RAB34Q9BZG1 259 aa12.43□□□□□ -0.42
CNOT3-202ENST00000358389 RAB17Q9H0T7 212 aa12.43□□□□□ -0.42
CNOT3-202ENST00000358389 TMEM60Q9H2L4 133 aa12.43□□□□□ -0.42
CNOT3-202ENST00000358389 LRRC4CQ9HCJ2 640 aa12.43□□□□□ -0.42
CNOT3-202ENST00000358389 MCM9Q9NXL9 1143 aa12.43□□□□□ -0.42
CNOT3-202ENST00000358389 C2CD2Q9Y426 696 aa12.43□□□□□ -0.42
CNOT3-202ENST00000358389 PXDNQ92626 1479 aa12.43□□□□□ -0.42
CNOT3-202ENST00000358389 RIPK1Q13546 671 aa12.43□□□□□ -0.42
CNOT3-202ENST00000358389 UBE4AQ14139 1066 aa12.43□□□□□ -0.42
CNOT3-202ENST00000358389 FAM47AQ5JRC9 791 aa12.43□□□□□ -0.42
CNOT3-202ENST00000358389 ZNF449Q6P9G9 518 aa12.43□□□□□ -0.42
CNOT3-202ENST00000358389 ENAHQ8N8S7 591 aaPredicted RBP12.43□□□□□ -0.42
CNOT3-202ENST00000358389 SPATA5Q8NB90 893 aa12.43□□□□□ -0.42
CNOT3-202ENST00000358389 SHISA4Q96DD7 197 aa12.43□□□□□ -0.42
CNOT3-202ENST00000358389 TACC3Q9Y6A5 838 aa12.43□□□□□ -0.42
CNOT3-202ENST00000358389 RGPD1P0DJD0 1748 aa12.43□□□□□ -0.42
CNOT3-202ENST00000358389 NEO1Q92859 1461 aa12.43□□□□□ -0.42
CNOT3-202ENST00000358389 SPDYE5A6NIY4 337 aa12.43□□□□□ -0.42
CNOT3-202ENST00000358389 TAOK1Q7L7X3 1001 aa12.43□□□□□ -0.42
CNOT3-202ENST00000358389 PBKQ96KB5 322 aa12.43□□□□□ -0.42
CNOT3-202ENST00000358389 UIMC1Q96RL1 719 aa12.43□□□□□ -0.42
CNOT3-202ENST00000358389 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.43□□□□□ -0.422e-7■■■■□ 22.3
CNOT3-202ENST00000358389 BTG4Q9NY30 223 aa12.43□□□□□ -0.42
CNOT3-202ENST00000358389 DAAM1Q9Y4D1 1078 aa12.43□□□□□ -0.42
CNOT3-202ENST00000358389 ABCC12Q96J65 1359 aa12.42□□□□□ -0.42
CNOT3-202ENST00000358389 H0YGN5 161 aa12.42□□□□□ -0.42
CNOT3-202ENST00000358389 TSPY3P0CV98 308 aa12.42□□□□□ -0.42
CNOT3-202ENST00000358389 TSPY8P0CW00 308 aa12.42□□□□□ -0.42
CNOT3-202ENST00000358389 VEGFAP15692 232 aaPredicted RBP12.42□□□□□ -0.42
CNOT3-202ENST00000358389 CALML3P27482 149 aa12.42□□□□□ -0.42
CNOT3-202ENST00000358389 PMS2P54278 862 aa12.42□□□□□ -0.42
CNOT3-202ENST00000358389 ZNF268Q14587 947 aaPredicted RBP12.42□□□□□ -0.42
CNOT3-202ENST00000358389 SETDB1Q15047 1291 aa12.42□□□□□ -0.42
CNOT3-202ENST00000358389 FIGNQ5HY92 759 aa12.42□□□□□ -0.42
CNOT3-202ENST00000358389 SV2BQ7L1I2 683 aa12.42□□□□□ -0.42
CNOT3-202ENST00000358389 METTL13Q8N6R0 699 aa12.42□□□□□ -0.42
CNOT3-202ENST00000358389 C1orf131Q8NDD1 294 aaKnown RBP12.42□□□□□ -0.42
CNOT3-202ENST00000358389 NUDCD1Q96RS6 583 aa12.42□□□□□ -0.42
CNOT3-202ENST00000358389 CRNKL1Q9BZJ0 848 aaKnown RBP12.42□□□□□ -0.42
CNOT3-202ENST00000358389 PIDD1Q9HB75 910 aa12.42□□□□□ -0.42
CNOT3-202ENST00000358389 NFS1Q9Y697 457 aa12.42□□□□□ -0.42
CNOT3-202ENST00000358389 ASAP2O43150 1006 aa12.42□□□□□ -0.42
CNOT3-202ENST00000358389 USP4Q13107 963 aa12.42□□□□□ -0.42
CNOT3-202ENST00000358389 SLC29A2Q14542 456 aa12.42□□□□□ -0.42
CNOT3-202ENST00000358389 CWF19L1Q69YN2 538 aaKnown RBP12.42□□□□□ -0.42
CNOT3-202ENST00000358389 RPGRQ92834 1020 aaKnown RBP12.42□□□□□ -0.42
CNOT3-202ENST00000358389 RAB3IPQ96QF0 476 aaPredicted RBP12.42□□□□□ -0.42
CNOT3-202ENST00000358389 TRIM9Q9C026 710 aa12.42□□□□□ -0.42
CNOT3-202ENST00000358389 MTFR1LQ9H019 292 aa12.42□□□□□ -0.42
CNOT3-202ENST00000358389 STMN4Q9H169 189 aaPredicted RBP12.42□□□□□ -0.42
CNOT3-202ENST00000358389 GREM2Q9H772 168 aa12.42□□□□□ -0.42
CNOT3-202ENST00000358389 SLC12A4Q9UP95 1085 aa12.42□□□□□ -0.42
CNOT3-202ENST00000358389 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.42□□□□□ -0.42
CNOT3-202ENST00000358389 RASGRF2O14827 1237 aa12.42□□□□□ -0.42
CNOT3-202ENST00000358389 STX2P32856 288 aa12.42□□□□□ -0.42
CNOT3-202ENST00000358389 RNASELQ05823 741 aaKnown RBP12.42□□□□□ -0.42
CNOT3-202ENST00000358389 CUL3Q13618 768 aa12.42□□□□□ -0.42
CNOT3-202ENST00000358389 LLGL1Q15334 1064 aa12.42□□□□□ -0.42
CNOT3-202ENST00000358389 DNAJC10Q8IXB1 793 aa12.42□□□□□ -0.42
CNOT3-202ENST00000358389 SLAIN2Q9P270 581 aa12.42□□□□□ -0.42
CNOT3-202ENST00000358389 ANKRD62A6NC57 917 aa12.41□□□□□ -0.42
CNOT3-202ENST00000358389 NBPF26B4DH59 902 aa12.41□□□□□ -0.42
CNOT3-202ENST00000358389 PJA2O43164 708 aa12.41□□□□□ -0.42
CNOT3-202ENST00000358389 KLRC4O43908 158 aa12.41□□□□□ -0.42
CNOT3-202ENST00000358389 CCNT1O60563 726 aaKnown RBP12.41□□□□□ -0.42
CNOT3-202ENST00000358389 FGFR4P22455 802 aa12.41□□□□□ -0.42
CNOT3-202ENST00000358389 RFC5P40937 340 aa12.41□□□□□ -0.42
CNOT3-202ENST00000358389 TXKP42681 527 aa12.41□□□□□ -0.42
CNOT3-202ENST00000358389 TRAPPC10P48553 1259 aa12.41□□□□□ -0.42
CNOT3-202ENST00000358389 ROR2Q01974 943 aaKnown RBP12.41□□□□□ -0.42
CNOT3-202ENST00000358389 NAALADL2Q58DX5 795 aa12.41□□□□□ -0.42
CNOT3-202ENST00000358389 RASIP1Q5U651 963 aa12.41□□□□□ -0.42
CNOT3-202ENST00000358389 MFN1Q8IWA4 741 aa12.41□□□□□ -0.42
CNOT3-202ENST00000358389 NBPF15Q8N660 670 aa12.41□□□□□ -0.42
CNOT3-202ENST00000358389 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.41□□□□□ -0.42
CNOT3-202ENST00000358389 MTRF1LQ9UGC7 380 aaKnown RBP12.41□□□□□ -0.42
CNOT3-202ENST00000358389 MYH13Q9UKX3 1938 aa12.41□□□□□ -0.42
CNOT3-202ENST00000358389 SSU72P8A0A1W2PR75 194 aa12.41□□□□□ -0.42
CNOT3-202ENST00000358389 NMT2O60551 498 aa12.41□□□□□ -0.42
CNOT3-202ENST00000358389 ABCB4P21439 1286 aa12.41□□□□□ -0.42
CNOT3-202ENST00000358389 KLC1Q07866 573 aa12.41□□□□□ -0.42
CNOT3-202ENST00000358389 ARL6IP4Q66PJ3 421 aaKnown RBP12.41□□□□□ -0.42
CNOT3-202ENST00000358389 EPS8L3Q8TE67 593 aaKnown RBP12.41□□□□□ -0.42
CNOT3-202ENST00000358389 GLG1Q92896 1179 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms