RNA–Protein interactions for RNA: ENST00000358173.7

EPHB4-201, Transcript of EPH receptor B4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB4, Length 4,329 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-201ENST00000358173 CEP83Q9Y592 693 aa17.19■□□□□ 0.34
EPHB4-201ENST00000358173 EZRP15311 586 aaKnown RBP17.19■□□□□ 0.34
EPHB4-201ENST00000358173 RAD54LQ92698 747 aa17.19■□□□□ 0.34
EPHB4-201ENST00000358173 KIFAP3Q92845 792 aa17.19■□□□□ 0.34
EPHB4-201ENST00000358173 ZMYND12Q9H0C1 365 aa17.19■□□□□ 0.34
EPHB4-201ENST00000358173 STMN4Q9H169 189 aaPredicted RBP17.19■□□□□ 0.34
EPHB4-201ENST00000358173 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.19■□□□□ 0.34
EPHB4-201ENST00000358173 PKN1Q16512 942 aa17.18■□□□□ 0.34
EPHB4-201ENST00000358173 SEL1L2Q5TEA6 688 aa17.18■□□□□ 0.34
EPHB4-201ENST00000358173 NAP1L3Q99457 506 aaPredicted RBP17.18■□□□□ 0.34
EPHB4-201ENST00000358173 THAP9Q9H5L6 903 aa17.18■□□□□ 0.34
EPHB4-201ENST00000358173 JRKLQ9Y4A0 524 aa17.18■□□□□ 0.34
EPHB4-201ENST00000358173 PALM3A6NDB9 673 aaPredicted RBP17.18■□□□□ 0.34
EPHB4-201ENST00000358173 LGALS16A8MUM7 142 aa17.18■□□□□ 0.34
EPHB4-201ENST00000358173 GOLGA8KD6RF30 607 aa17.18■□□□□ 0.34
EPHB4-201ENST00000358173 KRIT1O00522 736 aa17.18■□□□□ 0.34
EPHB4-201ENST00000358173 ACTN4O43707 911 aaKnown RBP17.18■□□□□ 0.34
EPHB4-201ENST00000358173 FTCDO95954 541 aa17.18■□□□□ 0.34
EPHB4-201ENST00000358173 GSTA5Q7RTV2 222 aa17.18■□□□□ 0.34
EPHB4-201ENST00000358173 CCDC170Q8IYT3 715 aa17.18■□□□□ 0.34
EPHB4-201ENST00000358173 EPB41L5Q9HCM4 733 aa17.18■□□□□ 0.34
EPHB4-201ENST00000358173 VEGFAP15692 232 aaPredicted RBP17.18■□□□□ 0.34
EPHB4-201ENST00000358173 FXR1P51114 621 aaKnown RBP eCLIP17.18■□□□□ 0.34
EPHB4-201ENST00000358173 NAA35Q5VZE5 725 aa17.18■□□□□ 0.34
EPHB4-201ENST00000358173 ILDR1Q86SU0 546 aaPredicted RBP17.18■□□□□ 0.34
EPHB4-201ENST00000358173 GSPT2Q8IYD1 628 aaKnown RBP17.18■□□□□ 0.34
EPHB4-201ENST00000358173 FAM151AQ8WW52 585 aa17.18■□□□□ 0.34
EPHB4-201ENST00000358173 CCDC77Q9BR77 488 aa17.18■□□□□ 0.34
EPHB4-201ENST00000358173 TRIM9Q9C026 710 aa17.18■□□□□ 0.34
EPHB4-201ENST00000358173 DPH5Q9H2P9 285 aa17.18■□□□□ 0.34
EPHB4-201ENST00000358173 FEM1BQ9UK73 627 aa17.18■□□□□ 0.34
EPHB4-201ENST00000358173 GOLGA8IPA6NC78 632 aa17.17■□□□□ 0.34
EPHB4-201ENST00000358173 GOLGA8JA6NMD2 632 aa17.17■□□□□ 0.34
EPHB4-201ENST00000358173 IPO5O00410 1097 aaKnown RBP17.17■□□□□ 0.34
EPHB4-201ENST00000358173 HEXIM1O94992 359 aaKnown RBP17.17■□□□□ 0.34
EPHB4-201ENST00000358173 CAPN7Q9Y6W3 813 aa17.17■□□□□ 0.34
EPHB4-201ENST00000358173 GMPSP49915 693 aaPredicted RBP17.17■□□□□ 0.34
EPHB4-201ENST00000358173 KIF11P52732 1056 aa17.17■□□□□ 0.34
EPHB4-201ENST00000358173 ANGEL2Q5VTE6 544 aaKnown RBP17.17■□□□□ 0.34
EPHB4-201ENST00000358173 FAM133AQ8N9E0 248 aa17.17■□□□□ 0.34
EPHB4-201ENST00000358173 SLC7A3Q8WY07 619 aa17.17■□□□□ 0.34
EPHB4-201ENST00000358173 OTUD5Q96G74 571 aa17.17■□□□□ 0.34
EPHB4-201ENST00000358173 DNAI2Q9GZS0 605 aa17.17■□□□□ 0.34
EPHB4-201ENST00000358173 PEX3P56589 373 aa17.17■□□□□ 0.34
EPHB4-201ENST00000358173 COASYQ13057 564 aa17.17■□□□□ 0.34
EPHB4-201ENST00000358173 PPP1R18Q6NYC8 613 aa17.17■□□□□ 0.34
EPHB4-201ENST00000358173 RAD9BQ6WBX8 426 aa17.17■□□□□ 0.34
EPHB4-201ENST00000358173 TRIM6Q9C030 488 aaPredicted RBP17.17■□□□□ 0.34
EPHB4-201ENST00000358173 USTQ9Y2C2 406 aa17.17■□□□□ 0.34
EPHB4-201ENST00000358173 FAM205AQ6ZU69 1335 aa17.17■□□□□ 0.34
EPHB4-201ENST00000358173 A0A1B0GTH6 734 aa17.17■□□□□ 0.34
EPHB4-201ENST00000358173 MARK3P27448 753 aa17.17■□□□□ 0.34
EPHB4-201ENST00000358173 MAP3K9P80192 1104 aa17.17■□□□□ 0.34
EPHB4-201ENST00000358173 ZFPM1Q8IX07 1006 aa17.17■□□□□ 0.34
EPHB4-201ENST00000358173 NPHP3-ACAD11A0A0J9YXS1 232 aa17.16■□□□□ 0.34
EPHB4-201ENST00000358173 ARHGAP25P42331 645 aa17.16■□□□□ 0.34
EPHB4-201ENST00000358173 VSNL1P62760 191 aa17.16■□□□□ 0.34
EPHB4-201ENST00000358173 ZRSR2Q15696 482 aaKnown RBP17.16■□□□□ 0.34
EPHB4-201ENST00000358173 PDXDC2PQ6P474 469 aa17.16■□□□□ 0.34
EPHB4-201ENST00000358173 PPP1R16BQ96T49 567 aa17.16■□□□□ 0.34
EPHB4-201ENST00000358173 MAP3K14Q99558 947 aa17.16■□□□□ 0.34
EPHB4-201ENST00000358173 CHP1Q99653 195 aa17.16■□□□□ 0.34
EPHB4-201ENST00000358173 RPAP3Q9H6T3 665 aaPredicted RBP17.16■□□□□ 0.34
EPHB4-201ENST00000358173 KMT5AQ9NQR1 393 aa17.16■□□□□ 0.34
EPHB4-201ENST00000358173 PNMA2Q9UL42 364 aa17.16■□□□□ 0.34
EPHB4-201ENST00000358173 PCDHAC2Q9Y5I4 1007 aa17.16■□□□□ 0.34
EPHB4-201ENST00000358173 TAL1P17542 331 aaPredicted RBP17.16■□□□□ 0.34
EPHB4-201ENST00000358173 STK4Q13043 487 aa17.16■□□□□ 0.34
EPHB4-201ENST00000358173 DPP9Q86TI2 863 aa17.16■□□□□ 0.34
EPHB4-201ENST00000358173 FAM20AQ96MK3 541 aa17.16■□□□□ 0.34
EPHB4-201ENST00000358173 ZDHHC15Q96MV8 337 aa17.16■□□□□ 0.34
EPHB4-201ENST00000358173 L2HGDHQ9H9P8 463 aa17.16■□□□□ 0.34
EPHB4-201ENST00000358173 MYO1CO00159 1063 aa17.16■□□□□ 0.34
EPHB4-201ENST00000358173 PSMC2P35998 433 aaKnown RBP17.16■□□□□ 0.34
EPHB4-201ENST00000358173 IREB2P48200 963 aaKnown RBP17.16■□□□□ 0.34
EPHB4-201ENST00000358173 CCDC91Q7Z6B0 441 aa17.16■□□□□ 0.34
EPHB4-201ENST00000358173 CCSER1Q9C0I3 900 aa17.16■□□□□ 0.34
EPHB4-201ENST00000358173 AFPP02771 609 aaKnown RBP17.15■□□□□ 0.34
EPHB4-201ENST00000358173 H2AFZP0C0S5 128 aa17.15■□□□□ 0.34
EPHB4-201ENST00000358173 GAP43P17677 238 aa17.15■□□□□ 0.34
EPHB4-201ENST00000358173 EPHB4P54760 987 aa17.15■□□□□ 0.34
EPHB4-201ENST00000358173 H2AFVQ71UI9 128 aa17.15■□□□□ 0.34
EPHB4-201ENST00000358173 MYOZ2Q9NPC6 264 aa17.15■□□□□ 0.34
EPHB4-201ENST00000358173 LRRC63Q05C16 580 aa17.15■□□□□ 0.34
EPHB4-201ENST00000358173 NBPF9Q3BBW0 867 aa17.15■□□□□ 0.34
EPHB4-201ENST00000358173 SLC51AQ86UW1 340 aa17.15■□□□□ 0.34
EPHB4-201ENST00000358173 DEFB129Q9H1M3 183 aa17.15■□□□□ 0.34
EPHB4-201ENST00000358173 AMFRQ9UKV5 643 aa17.15■□□□□ 0.34
EPHB4-201ENST00000358173 PCDHA13Q9Y5I0 950 aa17.15■□□□□ 0.34
EPHB4-201ENST00000358173 CCND2P30279 289 aa17.15■□□□□ 0.34
EPHB4-201ENST00000358173 HOXA10P31260 410 aaPredicted RBP17.15■□□□□ 0.34
EPHB4-201ENST00000358173 PSMD2Q13200 908 aa17.15■□□□□ 0.34
EPHB4-201ENST00000358173 FMNL3Q8IVF7 1028 aa17.15■□□□□ 0.34
EPHB4-201ENST00000358173 ADD3Q9UEY8 706 aaKnown RBP17.15■□□□□ 0.34
EPHB4-201ENST00000358173 CALRP27797 417 aaKnown RBP17.15■□□□□ 0.34
EPHB4-201ENST00000358173 LLGL1Q15334 1064 aa17.15■□□□□ 0.34
EPHB4-201ENST00000358173 SYCE1Q8N0S2 351 aa17.15■□□□□ 0.34
EPHB4-201ENST00000358173 UHMK1Q8TAS1 419 aaKnown RBP17.15■□□□□ 0.34
EPHB4-201ENST00000358173 GCNT4Q9P109 453 aa17.15■□□□□ 0.34
EPHB4-201ENST00000358173 INO80B-WBP1J3KQ70 363 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms