RNA–Protein interactions for RNA: ENST00000357508.5

C1orf228-201, Transcript of Uncharacterized protein C1orf228, humanhuman

TSL 1 (best)

Gene C1orf228, Length 2,113 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf228-201ENST00000357508 SOCS7O14512 581 aa28.78■■■□□ 2.2
C1orf228-201ENST00000357508 CPXCR1Q8N123 301 aa28.78■■■□□ 2.2
C1orf228-201ENST00000357508 MMRN2Q9H8L6 949 aa28.78■■■□□ 2.2
C1orf228-201ENST00000357508 MYH11P35749 1972 aa28.78■■■□□ 2.2
C1orf228-201ENST00000357508 TADA3O75528 432 aa28.78■■■□□ 2.2
C1orf228-201ENST00000357508 VCAM1P19320 739 aa28.78■■■□□ 2.2
C1orf228-201ENST00000357508 MUTP22033 750 aa28.78■■■□□ 2.2
C1orf228-201ENST00000357508 HNRNPH3P31942 346 aaKnown RBP28.78■■■□□ 2.2
C1orf228-201ENST00000357508 HERVK_113P62684 666 aa28.78■■■□□ 2.2
C1orf228-201ENST00000357508 MTMR2Q13614 643 aa28.78■■■□□ 2.2
C1orf228-201ENST00000357508 TRIM59Q8IWR1 403 aa28.78■■■□□ 2.2
C1orf228-201ENST00000357508 TEKT3Q9BXF9 490 aa28.78■■■□□ 2.2
C1orf228-201ENST00000357508 NHEJ1Q9H9Q4 299 aaPredicted RBP28.78■■■□□ 2.2
C1orf228-201ENST00000357508 RAVER2Q9HCJ3 691 aaKnown RBP28.78■■■□□ 2.2
C1orf228-201ENST00000357508 MYO1AQ9UBC5 1043 aa28.78■■■□□ 2.2
C1orf228-201ENST00000357508 HOXD13P35453 343 aa28.77■■■□□ 2.2
C1orf228-201ENST00000357508 CYLC1P35663 651 aaPredicted RBP28.77■■■□□ 2.2
C1orf228-201ENST00000357508 KRT26Q7Z3Y9 468 aa28.77■■■□□ 2.2
C1orf228-201ENST00000357508 MCF2L2Q86YR7 1114 aa28.77■■■□□ 2.2
C1orf228-201ENST00000357508 CCDC170Q8IYT3 715 aa28.77■■■□□ 2.2
C1orf228-201ENST00000357508 SLC35F6Q8N357 371 aa28.77■■■□□ 2.2
C1orf228-201ENST00000357508 PLAGL2Q9UPG8 496 aa28.77■■■□□ 2.2
C1orf228-201ENST00000357508 TRAF3IP3Q9Y228 551 aa28.77■■■□□ 2.2
C1orf228-201ENST00000357508 TBCAO75347 108 aaKnown RBP28.76■■■□□ 2.2
C1orf228-201ENST00000357508 MYBP10242 640 aa28.76■■■□□ 2.2
C1orf228-201ENST00000357508 ALAS1P13196 640 aa28.76■■■□□ 2.2
C1orf228-201ENST00000357508 ITGB5P18084 799 aa28.76■■■□□ 2.2
C1orf228-201ENST00000357508 KNOP1Q1ED39 458 aaKnown RBP28.76■■■□□ 2.2
C1orf228-201ENST00000357508 PPP1R9AQ9ULJ8 1098 aa28.76■■■□□ 2.2
C1orf228-201ENST00000357508 COL11A1P12107 1806 aaPredicted RBP28.76■■■□□ 2.19
C1orf228-201ENST00000357508 IPO5O00410 1097 aaKnown RBP28.76■■■□□ 2.19
C1orf228-201ENST00000357508 FLOT1O75955 427 aa28.76■■■□□ 2.19
C1orf228-201ENST00000357508 KCNMA1Q12791 1236 aa28.76■■■□□ 2.19
C1orf228-201ENST00000357508 ADAM9Q13443 819 aa28.76■■■□□ 2.19
C1orf228-201ENST00000357508 EPHA7Q15375 998 aa28.76■■■□□ 2.19
C1orf228-201ENST00000357508 CCDC155Q8N6L0 562 aa28.76■■■□□ 2.19
C1orf228-201ENST00000357508 PHIPQ8WWQ0 1821 aa28.76■■■□□ 2.19
C1orf228-201ENST00000357508 ZC3H4Q9UPT8 1303 aaKnown RBP28.75■■■□□ 2.19
C1orf228-201ENST00000357508 RLFQ13129 1914 aa28.75■■■□□ 2.19
C1orf228-201ENST00000357508 GLTPD2A6NH11 291 aa28.75■■■□□ 2.19
C1orf228-201ENST00000357508 BCRP11274 1271 aa28.75■■■□□ 2.19
C1orf228-201ENST00000357508 BMT2Q1RMZ1 405 aa28.75■■■□□ 2.19
C1orf228-201ENST00000357508 DCAF15Q66K64 600 aa28.75■■■□□ 2.19
C1orf228-201ENST00000357508 C1orf186Q6ZWK4 172 aa28.75■■■□□ 2.19
C1orf228-201ENST00000357508 IL31RAQ8NI17 732 aa28.75■■■□□ 2.19
C1orf228-201ENST00000357508 RIT2Q99578 217 aa28.75■■■□□ 2.19
C1orf228-201ENST00000357508 HAUS4Q9H6D7 363 aa28.75■■■□□ 2.19
C1orf228-201ENST00000357508 BCAS3Q9H6U6 928 aa28.75■■■□□ 2.19
C1orf228-201ENST00000357508 EIF3CLB5ME19 914 aaKnown RBP28.75■■■□□ 2.19
C1orf228-201ENST00000357508 KRT83P78385 493 aa28.75■■■□□ 2.19
C1orf228-201ENST00000357508 PPP2R3AQ06190 1150 aa28.75■■■□□ 2.19
C1orf228-201ENST00000357508 MUM1L1Q5H9M0 696 aa28.75■■■□□ 2.19
C1orf228-201ENST00000357508 SMCR8Q8TEV9 937 aaPredicted RBP28.75■■■□□ 2.19
C1orf228-201ENST00000357508 EIF3CQ99613 913 aaKnown RBP28.75■■■□□ 2.19
C1orf228-201ENST00000357508 OLFML3Q9NRN5 406 aa28.75■■■□□ 2.19
C1orf228-201ENST00000357508 WRAP73Q9P2S5 460 aaPredicted RBP28.75■■■□□ 2.19
C1orf228-201ENST00000357508 PPP2R3BQ9Y5P8 575 aa28.75■■■□□ 2.19
C1orf228-201ENST00000357508 EFCAB8A8MWE9 144 aa28.74■■■□□ 2.19
C1orf228-201ENST00000357508 ZBTB39O15060 712 aa28.74■■■□□ 2.19
C1orf228-201ENST00000357508 CETN3O15182 167 aa28.74■■■□□ 2.19
C1orf228-201ENST00000357508 PRPF6O94906 941 aaKnown RBP28.74■■■□□ 2.19
C1orf228-201ENST00000357508 GAP43P17677 238 aa28.74■■■□□ 2.19
C1orf228-201ENST00000357508 NR2F2P24468 414 aa28.74■■■□□ 2.19
C1orf228-201ENST00000357508 ZNF662Q6ZS27 426 aa28.74■■■□□ 2.19
C1orf228-201ENST00000357508 RPAP3Q9H6T3 665 aaPredicted RBP28.74■■■□□ 2.19
C1orf228-201ENST00000357508 POLD4Q9HCU8 107 aa28.74■■■□□ 2.19
C1orf228-201ENST00000357508 TRIM10Q9UDY6 481 aa28.74■■■□□ 2.19
C1orf228-201ENST00000357508 FZD1Q9UP38 647 aa28.74■■■□□ 2.19
C1orf228-201ENST00000357508 USP14P54578 494 aa28.73■■■□□ 2.19
C1orf228-201ENST00000357508 DLK2Q6UY11 383 aa28.73■■■□□ 2.19
C1orf228-201ENST00000357508 NIPA1Q7RTP0 329 aa28.73■■■□□ 2.19
C1orf228-201ENST00000357508 NEK11Q8NG66 645 aa28.73■■■□□ 2.19
C1orf228-201ENST00000357508 BAP1Q92560 729 aa28.73■■■□□ 2.19
C1orf228-201ENST00000357508 EDEM3Q9BZQ6 932 aa28.73■■■□□ 2.19
C1orf228-201ENST00000357508 ZNF112Q9UJU3 913 aa28.73■■■□□ 2.19
C1orf228-201ENST00000357508 UTP18Q9Y5J1 556 aaKnown RBP eCLIP28.73■■■□□ 2.19
C1orf228-201ENST00000357508 POLR2AP24928 1970 aaKnown RBP28.73■■■□□ 2.19
C1orf228-201ENST00000357508 FRMPD4Q14CM0 1322 aa28.73■■■□□ 2.19
C1orf228-201ENST00000357508 PDXKO00764 312 aa28.73■■■□□ 2.19
C1orf228-201ENST00000357508 SCYL3Q8IZE3 742 aa28.73■■■□□ 2.19
C1orf228-201ENST00000357508 SYTL5Q8TDW5 730 aaPredicted RBP28.73■■■□□ 2.19
C1orf228-201ENST00000357508 UBXN4Q92575 508 aa28.73■■■□□ 2.19
C1orf228-201ENST00000357508 NACC1Q96RE7 527 aa28.73■■■□□ 2.19
C1orf228-201ENST00000357508 CCDC94Q9BW85 323 aaPredicted RBP28.73■■■□□ 2.19
C1orf228-201ENST00000357508 HOMER2Q9NSB8 354 aa28.73■■■□□ 2.19
C1orf228-201ENST00000357508 FAM184BQ9ULE4 1060 aa28.73■■■□□ 2.19
C1orf228-201ENST00000357508 CTAGE9A4FU28 777 aa28.72■■■□□ 2.19
C1orf228-201ENST00000357508 SPP2Q13103 211 aa28.72■■■□□ 2.19
C1orf228-201ENST00000357508 FBXO38Q6PIJ6 1188 aa28.72■■■□□ 2.19
C1orf228-201ENST00000357508 KCNH7Q9NS40 1196 aa28.72■■■□□ 2.19
C1orf228-201ENST00000357508 MAP3K20Q9NYL2 800 aaKnown RBP28.72■■■□□ 2.19
C1orf228-201ENST00000357508 GCNT3O95395 438 aa28.72■■■□□ 2.19
C1orf228-201ENST00000357508 EPHX2P34913 555 aa28.72■■■□□ 2.19
C1orf228-201ENST00000357508 PCNX4Q63HM2 1172 aa28.72■■■□□ 2.19
C1orf228-201ENST00000357508 DCPSQ96C86 337 aaKnown RBP28.72■■■□□ 2.19
C1orf228-201ENST00000357508 ARID3AQ99856 593 aa28.72■■■□□ 2.19
C1orf228-201ENST00000357508 GUCA1BQ9UMX6 200 aa28.72■■■□□ 2.19
C1orf228-201ENST00000357508 UBIAD1Q9Y5Z9 338 aa28.72■■■□□ 2.19
C1orf228-201ENST00000357508 LRRC53A6NM62 1247 aa28.71■■■□□ 2.19
C1orf228-201ENST00000357508 CALUO43852 315 aaPredicted RBP28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms