RNA–Protein interactions for RNA: ENST00000357412.2

LINC01560-201, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

BASIC

Gene LINC01560, Length 1,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-201ENST00000357412 BDP1A6H8Y1 2624 aa11.7□□□□□ -0.54
LINC01560-201ENST00000357412 LAMA4Q16363 1823 aa11.7□□□□□ -0.54
LINC01560-201ENST00000357412 TET1Q8NFU7 2136 aa11.69□□□□□ -0.54
LINC01560-201ENST00000357412 STXBP3O00186 592 aa11.69□□□□□ -0.54
LINC01560-201ENST00000357412 MEIS1O00470 390 aa11.69□□□□□ -0.54
LINC01560-201ENST00000357412 ZBTB43O43298 467 aa11.69□□□□□ -0.54
LINC01560-201ENST00000357412 KCNA5P22460 613 aa11.69□□□□□ -0.54
LINC01560-201ENST00000357412 NAPAP54920 295 aa11.69□□□□□ -0.54
LINC01560-201ENST00000357412 ACTR2P61160 394 aa11.69□□□□□ -0.54
LINC01560-201ENST00000357412 IGBP1P78318 339 aa11.69□□□□□ -0.54
LINC01560-201ENST00000357412 ITGB3BPQ13352 177 aaPredicted RBP11.69□□□□□ -0.54
LINC01560-201ENST00000357412 GPM6BQ13491 265 aa11.69□□□□□ -0.54
LINC01560-201ENST00000357412 PTPROQ16827 1216 aa11.69□□□□□ -0.54
LINC01560-201ENST00000357412 CEP55Q53EZ4 464 aa11.69□□□□□ -0.54
LINC01560-201ENST00000357412 RSPH3Q86UC2 560 aa11.69□□□□□ -0.54
LINC01560-201ENST00000357412 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.69□□□□□ -0.54
LINC01560-201ENST00000357412 C1QTNF1Q9BXJ1 281 aa11.69□□□□□ -0.54
LINC01560-201ENST00000357412 ANO3Q9BYT9 981 aa11.69□□□□□ -0.54
LINC01560-201ENST00000357412 AGO3Q9H9G7 860 aaKnown RBP11.69□□□□□ -0.54
LINC01560-201ENST00000357412 RC3H2Q9HBD1 1191 aaKnown RBP11.69□□□□□ -0.54
LINC01560-201ENST00000357412 AGO4Q9HCK5 861 aaKnown RBP11.69□□□□□ -0.54
LINC01560-201ENST00000357412 CD320Q9NPF0 282 aa11.69□□□□□ -0.54
LINC01560-201ENST00000357412 BARHL2Q9NY43 387 aa11.69□□□□□ -0.54
LINC01560-201ENST00000357412 SLC9A2Q9UBY0 812 aa11.69□□□□□ -0.54
LINC01560-201ENST00000357412 CDY2AQ9Y6F7 541 aa11.69□□□□□ -0.54
LINC01560-201ENST00000357412 NFASCO94856 1347 aa11.68□□□□□ -0.54
LINC01560-201ENST00000357412 SMCO2A6NFE2 343 aa11.68□□□□□ -0.54
LINC01560-201ENST00000357412 RRN3P2A6NIE6 340 aa11.68□□□□□ -0.54
LINC01560-201ENST00000357412 C5orf67F2Z3F1 127 aa11.68□□□□□ -0.54
LINC01560-201ENST00000357412 hCG_1984214I3L0E3 225 aa11.68□□□□□ -0.54
LINC01560-201ENST00000357412 ATG7O95352 703 aa11.68□□□□□ -0.54
LINC01560-201ENST00000357412 FOSP01100 380 aaPredicted RBP11.68□□□□□ -0.54
LINC01560-201ENST00000357412 CDC27P30260 824 aa11.68□□□□□ -0.54
LINC01560-201ENST00000357412 SREBF1P36956 1147 aa11.68□□□□□ -0.54
LINC01560-201ENST00000357412 CLK2P49760 499 aaKnown RBP11.68□□□□□ -0.54
LINC01560-201ENST00000357412 STAT5BP51692 787 aa11.68□□□□□ -0.54
LINC01560-201ENST00000357412 MRPS6P82932 125 aaKnown RBP11.68□□□□□ -0.54
LINC01560-201ENST00000357412 COL19A1Q14993 1142 aa11.68□□□□□ -0.54
LINC01560-201ENST00000357412 PLCB4Q15147 1175 aa11.68□□□□□ -0.54
LINC01560-201ENST00000357412 TIGD5Q53EQ6 642 aa11.68□□□□□ -0.54
LINC01560-201ENST00000357412 TSHZ1Q6ZSZ6 1077 aa11.68□□□□□ -0.54
LINC01560-201ENST00000357412 CENPQQ7L2Z9 268 aaPredicted RBP11.68□□□□□ -0.54
LINC01560-201ENST00000357412 PLPPR4Q7Z2D5 763 aa11.68□□□□□ -0.54
LINC01560-201ENST00000357412 ZNF713Q8N859 430 aaPredicted RBP11.68□□□□□ -0.54
LINC01560-201ENST00000357412 BANK1Q8NDB2 785 aa11.68□□□□□ -0.54
LINC01560-201ENST00000357412 NEK9Q8TD19 979 aa11.68□□□□□ -0.54
LINC01560-201ENST00000357412 LINC01599Q8WXQ3 324 aa11.68□□□□□ -0.54
LINC01560-201ENST00000357412 KHSRPQ92945 711 aaKnown RBP eCLIP11.68□□□□□ -0.54
LINC01560-201ENST00000357412 ZNF689Q96CS4 500 aaPredicted RBP11.68□□□□□ -0.54
LINC01560-201ENST00000357412 SDF4Q9BRK5 362 aa11.68□□□□□ -0.54
LINC01560-201ENST00000357412 FAM49AQ9H0Q0 323 aaPredicted RBP11.68□□□□□ -0.54
LINC01560-201ENST00000357412 AZI2Q9H6S1 392 aa11.68□□□□□ -0.54
LINC01560-201ENST00000357412 TMEM260Q9NX78 707 aa11.68□□□□□ -0.54
LINC01560-201ENST00000357412 TRPC6Q9Y210 931 aa11.68□□□□□ -0.54
LINC01560-201ENST00000357412 IGKV6D-21A0A0A0MT36 114 aa11.67□□□□□ -0.54
LINC01560-201ENST00000357412 KLF18A0A0U1RQI7 1052 aa11.67□□□□□ -0.54
LINC01560-201ENST00000357412 GOLGA8AA7E2F4 631 aa11.67□□□□□ -0.54
LINC01560-201ENST00000357412 GOLGA8BA8MQT2 603 aa11.67□□□□□ -0.54
LINC01560-201ENST00000357412 CCNE2O96020 404 aa11.67□□□□□ -0.54
LINC01560-201ENST00000357412 CD52P31358 61 aa11.67□□□□□ -0.54
LINC01560-201ENST00000357412 ADD1P35611 737 aaKnown RBP11.67□□□□□ -0.54
LINC01560-201ENST00000357412 BMPR1AP36894 532 aa11.67□□□□□ -0.54
LINC01560-201ENST00000357412 ADCY7P51828 1080 aa11.67□□□□□ -0.54
LINC01560-201ENST00000357412 RCAN1P53805 252 aa11.67□□□□□ -0.54
LINC01560-201ENST00000357412 AP3B2Q13367 1082 aa11.67□□□□□ -0.54
LINC01560-201ENST00000357412 KRT32Q14532 448 aa11.67□□□□□ -0.54
LINC01560-201ENST00000357412 TCEAL5Q5H9L2 206 aa11.67□□□□□ -0.54
LINC01560-201ENST00000357412 IER5Q5VY09 327 aa11.67□□□□□ -0.54
LINC01560-201ENST00000357412 RTN4RL1Q86UN2 441 aaPredicted RBP11.67□□□□□ -0.54
LINC01560-201ENST00000357412 CRIPAKQ8N1N5 446 aa11.67□□□□□ -0.54
LINC01560-201ENST00000357412 FIBCD1Q8N539 461 aa11.67□□□□□ -0.54
LINC01560-201ENST00000357412 KCNB2Q92953 911 aa11.67□□□□□ -0.54
LINC01560-201ENST00000357412 CLP1Q92989 425 aaKnown RBP11.67□□□□□ -0.54
LINC01560-201ENST00000357412 PCDHA2Q9Y5H9 948 aa11.67□□□□□ -0.54
LINC01560-201ENST00000357412 SQORQ9Y6N5 450 aa11.67□□□□□ -0.54
LINC01560-201ENST00000357412 TRANK1O15050 2925 aa11.66□□□□□ -0.54
LINC01560-201ENST00000357412 ADGRA3Q8IWK6 1321 aa11.66□□□□□ -0.54
LINC01560-201ENST00000357412 SCN5AQ14524 2016 aa11.66□□□□□ -0.54
LINC01560-201ENST00000357412 SMIM35A0A1B0GVV1 85 aa11.66□□□□□ -0.54
LINC01560-201ENST00000357412 FAM86B1E9PN63 330 aa11.66□□□□□ -0.54
LINC01560-201ENST00000357412 H3BQ06 376 aaPredicted RBP11.66□□□□□ -0.54
LINC01560-201ENST00000357412 DHX15O43143 795 aaKnown RBP11.66□□□□□ -0.54
LINC01560-201ENST00000357412 ABCB7O75027 752 aa11.66□□□□□ -0.54
LINC01560-201ENST00000357412 CDC45O75419 566 aa11.66□□□□□ -0.54
LINC01560-201ENST00000357412 DGKIO75912 1065 aa11.66□□□□□ -0.54
LINC01560-201ENST00000357412 RPLP2P05387 115 aaKnown RBP11.66□□□□□ -0.54
LINC01560-201ENST00000357412 RB1P06400 928 aa11.66□□□□□ -0.54
LINC01560-201ENST00000357412 FAM86B2P0C5J1 330 aa11.66□□□□□ -0.54
LINC01560-201ENST00000357412 IL9P15248 144 aa11.66□□□□□ -0.54
LINC01560-201ENST00000357412 CTNNB1P35222 781 aa11.66□□□□□ -0.54
LINC01560-201ENST00000357412 ABHD15Q6UXT9 468 aa11.66□□□□□ -0.54
LINC01560-201ENST00000357412 FAM178BQ8IXR5 827 aa11.66□□□□□ -0.54
LINC01560-201ENST00000357412 TRAPPC12Q8WVT3 735 aa11.66□□□□□ -0.54
LINC01560-201ENST00000357412 CRYGNQ8WXF5 182 aa11.66□□□□□ -0.54
LINC01560-201ENST00000357412 TNPO1Q92973 898 aaKnown RBP11.66□□□□□ -0.54
LINC01560-201ENST00000357412 PABPC5Q96DU9 382 aaKnown RBP11.66□□□□□ -0.54
LINC01560-201ENST00000357412 GLT8D2Q9H1C3 349 aa11.66□□□□□ -0.54
LINC01560-201ENST00000357412 NSUN3Q9H649 340 aaKnown RBP11.66□□□□□ -0.54
LINC01560-201ENST00000357412 TRPV2Q9Y5S1 764 aa11.66□□□□□ -0.54
LINC01560-201ENST00000357412 POTEB3A0JP26 581 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms