RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 CD163L1Q9NR16 1453 aa12.69□□□□□ -0.38
COL9A1-202ENST00000357250 OSBPP22059 807 aa12.69□□□□□ -0.38
COL9A1-202ENST00000357250 CCT5P48643 541 aa12.69□□□□□ -0.38
COL9A1-202ENST00000357250 JAK3P52333 1124 aa12.69□□□□□ -0.38
COL9A1-202ENST00000357250 ADCY2Q08462 1091 aa12.69□□□□□ -0.38
COL9A1-202ENST00000357250 TRIM28Q13263 835 aaKnown RBP12.69□□□□□ -0.38
COL9A1-202ENST00000357250 LRRC41Q15345 812 aa12.69□□□□□ -0.38
COL9A1-202ENST00000357250 C6orf118Q5T5N4 469 aa12.69□□□□□ -0.38
COL9A1-202ENST00000357250 ALKBH5Q6P6C2 394 aaKnown RBP12.69□□□□□ -0.38
COL9A1-202ENST00000357250 GADL1Q6ZQY3 521 aa12.69□□□□□ -0.38
COL9A1-202ENST00000357250 GRAMD1CQ8IYS0 662 aa12.69□□□□□ -0.38
COL9A1-202ENST00000357250 CNPY4Q8N129 248 aa12.69□□□□□ -0.38
COL9A1-202ENST00000357250 MARCH10Q8NA82 808 aaPredicted RBP12.69□□□□□ -0.38
COL9A1-202ENST00000357250 CFAP61Q8NHU2 1237 aa12.69□□□□□ -0.38
COL9A1-202ENST00000357250 MAD1L1Q9Y6D9 718 aa12.69□□□□□ -0.38
COL9A1-202ENST00000357250 SOWAHDA6NJG2 315 aa12.69□□□□□ -0.38
COL9A1-202ENST00000357250 SGK1O00141 431 aa12.69□□□□□ -0.38
COL9A1-202ENST00000357250 DHX9Q08211 1270 aaKnown RBP12.69□□□□□ -0.38
COL9A1-202ENST00000357250 PLCB4Q15147 1175 aa12.69□□□□□ -0.38
COL9A1-202ENST00000357250 NME8Q8N427 588 aa12.69□□□□□ -0.38
COL9A1-202ENST00000357250 ACRBPQ8NEB7 543 aa12.69□□□□□ -0.38
COL9A1-202ENST00000357250 EDEM3Q9BZQ6 932 aa12.69□□□□□ -0.38
COL9A1-202ENST00000357250 PLEKHA4Q9H4M7 779 aa12.69□□□□□ -0.38
COL9A1-202ENST00000357250 GPC4O75487 556 aa12.69□□□□□ -0.38
COL9A1-202ENST00000357250 RPS6KA4O75676 772 aa12.69□□□□□ -0.38
COL9A1-202ENST00000357250 SLC16A2P36021 539 aa12.69□□□□□ -0.38
COL9A1-202ENST00000357250 ARL4AP40617 200 aa12.69□□□□□ -0.38
COL9A1-202ENST00000357250 MSH2P43246 934 aa12.69□□□□□ -0.38
COL9A1-202ENST00000357250 NAA35Q5VZE5 725 aa12.69□□□□□ -0.38
COL9A1-202ENST00000357250 PLTPP55058 493 aa12.68□□□□□ -0.38
COL9A1-202ENST00000357250 HSP90AA5PQ58FG0 334 aa12.68□□□□□ -0.38
COL9A1-202ENST00000357250 USP17L2Q6R6M4 530 aa12.68□□□□□ -0.38
COL9A1-202ENST00000357250 GBP7Q8N8V2 638 aaPredicted RBP12.68□□□□□ -0.38
COL9A1-202ENST00000357250 SLC44A5Q8NCS7 719 aa12.68□□□□□ -0.38
COL9A1-202ENST00000357250 COA7Q96BR5 231 aa12.68□□□□□ -0.38
COL9A1-202ENST00000357250 FAM193BQ96PV7 902 aaPredicted RBP12.68□□□□□ -0.38
COL9A1-202ENST00000357250 FMO2Q99518 471 aa12.68□□□□□ -0.38
COL9A1-202ENST00000357250 EFCC1Q9HA90 598 aa12.68□□□□□ -0.38
COL9A1-202ENST00000357250 MYO3BQ8WXR4 1341 aa12.68□□□□□ -0.38
COL9A1-202ENST00000357250 A0A0G2JLW4 131 aa12.68□□□□□ -0.38
COL9A1-202ENST00000357250 NMT2O60551 498 aa12.68□□□□□ -0.38
COL9A1-202ENST00000357250 RAD17O75943 681 aa12.68□□□□□ -0.38
COL9A1-202ENST00000357250 GFPT2O94808 682 aa12.68□□□□□ -0.38
COL9A1-202ENST00000357250 RWDD2BP57060 319 aa12.68□□□□□ -0.38
COL9A1-202ENST00000357250 KIF22Q14807 665 aa12.68□□□□□ -0.38
COL9A1-202ENST00000357250 ADAT2Q7Z6V5 191 aaKnown RBP12.68□□□□□ -0.38
COL9A1-202ENST00000357250 SGMS1Q86VZ5 419 aa12.68□□□□□ -0.38
COL9A1-202ENST00000357250 SCYL1Q96KG9 808 aa12.68□□□□□ -0.38
COL9A1-202ENST00000357250 TXLNGQ9NUQ3 528 aa12.68□□□□□ -0.38
COL9A1-202ENST00000357250 SEL1LQ9UBV2 794 aa12.68□□□□□ -0.38
COL9A1-202ENST00000357250 COL15A1P39059 1388 aa12.68□□□□□ -0.38
COL9A1-202ENST00000357250 HSPA8P11142 646 aaKnown RBP12.68□□□□□ -0.38
COL9A1-202ENST00000357250 LIG3P49916 1009 aa12.68□□□□□ -0.38
COL9A1-202ENST00000357250 KAZNQ674X7 775 aa12.68□□□□□ -0.38
COL9A1-202ENST00000357250 MB21D2Q8IYB1 491 aaPredicted RBP12.68□□□□□ -0.38
COL9A1-202ENST00000357250 FMR1NBQ8N0W7 255 aaPredicted RBP12.68□□□□□ -0.38
COL9A1-202ENST00000357250 ZDHHC9Q9Y397 364 aa12.68□□□□□ -0.38
COL9A1-202ENST00000357250 ASNSP08243 561 aa12.68□□□□□ -0.38
COL9A1-202ENST00000357250 ADRA2BP18089 450 aa12.68□□□□□ -0.38
COL9A1-202ENST00000357250 RFX1P22670 979 aa12.68□□□□□ -0.38
COL9A1-202ENST00000357250 DDIT3P35638 169 aa12.68□□□□□ -0.38
COL9A1-202ENST00000357250 MYO1EQ12965 1108 aa12.68□□□□□ -0.38
COL9A1-202ENST00000357250 CASP8Q14790 479 aa12.68□□□□□ -0.38
COL9A1-202ENST00000357250 MCPH1Q8NEM0 835 aa12.68□□□□□ -0.38
COL9A1-202ENST00000357250 UBE2TQ9NPD8 197 aaPredicted RBP12.68□□□□□ -0.38
COL9A1-202ENST00000357250 THEGQ9P2T0 379 aa12.68□□□□□ -0.38
COL9A1-202ENST00000357250 ATP8A1Q9Y2Q0 1164 aa12.68□□□□□ -0.38
COL9A1-202ENST00000357250 SYNGAP1Q96PV0 1343 aa12.67□□□□□ -0.38
COL9A1-202ENST00000357250 INO80B-WBP1J3KQ70 363 aa12.67□□□□□ -0.38
COL9A1-202ENST00000357250 GDF11O95390 407 aa12.67□□□□□ -0.38
COL9A1-202ENST00000357250 KRT1P04264 644 aa12.67□□□□□ -0.38
COL9A1-202ENST00000357250 GSTA1P08263 222 aa12.67□□□□□ -0.38
COL9A1-202ENST00000357250 GSTA2P09210 222 aa12.67□□□□□ -0.38
COL9A1-202ENST00000357250 CLCN6P51797 869 aa12.67□□□□□ -0.38
COL9A1-202ENST00000357250 CAV1Q03135 178 aa12.67□□□□□ -0.38
COL9A1-202ENST00000357250 DMTNQ08495 405 aa12.67□□□□□ -0.38
COL9A1-202ENST00000357250 RAB44Q7Z6P3 723 aaPredicted RBP12.67□□□□□ -0.38
COL9A1-202ENST00000357250 INO80BQ9C086 356 aaPredicted RBP12.67□□□□□ -0.38
COL9A1-202ENST00000357250 FAM196BA6NMK8 535 aa12.67□□□□□ -0.38
COL9A1-202ENST00000357250 POC1B-GALNT4F8VUJ3 575 aa12.67□□□□□ -0.38
COL9A1-202ENST00000357250 RASGRF2O14827 1237 aa12.67□□□□□ -0.38
COL9A1-202ENST00000357250 ZBTB5O15062 677 aa12.67□□□□□ -0.38
COL9A1-202ENST00000357250 MOCS3O95396 460 aa12.67□□□□□ -0.38
COL9A1-202ENST00000357250 CPP00450 1065 aa12.67□□□□□ -0.38
COL9A1-202ENST00000357250 DR1Q01658 176 aa12.67□□□□□ -0.38
COL9A1-202ENST00000357250 STOX1Q6ZVD7 989 aa12.67□□□□□ -0.38
COL9A1-202ENST00000357250 CYB5R4Q7L1T6 521 aa12.67□□□□□ -0.38
COL9A1-202ENST00000357250 RTKN2Q8IZC4 609 aa12.67□□□□□ -0.38
COL9A1-202ENST00000357250 MICAL1Q8TDZ2 1067 aa12.67□□□□□ -0.38
COL9A1-202ENST00000357250 NUB1Q9Y5A7 615 aa12.67□□□□□ -0.38
COL9A1-202ENST00000357250 ATP8B3O60423 1300 aa12.67□□□□□ -0.38
COL9A1-202ENST00000357250 TTI1O43156 1089 aa12.67□□□□□ -0.38
COL9A1-202ENST00000357250 SORBS3O60504 671 aa12.67□□□□□ -0.38
COL9A1-202ENST00000357250 CTNND1O60716 968 aaKnown RBP12.67□□□□□ -0.38
COL9A1-202ENST00000357250 NR1H3Q13133 447 aa12.67□□□□□ -0.38
COL9A1-202ENST00000357250 NNTQ13423 1086 aa12.67□□□□□ -0.38
COL9A1-202ENST00000357250 ARHGEF6Q15052 776 aa12.67□□□□□ -0.38
COL9A1-202ENST00000357250 KRT39Q6A163 491 aa12.67□□□□□ -0.38
COL9A1-202ENST00000357250 TTBK2Q6IQ55 1244 aa12.67□□□□□ -0.38
COL9A1-202ENST00000357250 METTL23Q86XA0 190 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms