RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 KRT5P13647 590 aa7.1□□□□□ -1.27
TRIM38-201ENST00000357085 KCNA3P22001 575 aa7.1□□□□□ -1.27
TRIM38-201ENST00000357085 FKBP3Q00688 224 aaKnown RBP7.1□□□□□ -1.27
TRIM38-201ENST00000357085 PPARDQ03181 441 aa7.1□□□□□ -1.27
TRIM38-201ENST00000357085 MAP7D1Q3KQU3 841 aa7.1□□□□□ -1.27
TRIM38-201ENST00000357085 TMEM259Q4ZIN3 620 aa7.1□□□□□ -1.27
TRIM38-201ENST00000357085 TEDDM1Q5T9Z0 273 aa7.1□□□□□ -1.27
TRIM38-201ENST00000357085 EAF2Q96CJ1 260 aaPredicted RBP7.1□□□□□ -1.27
TRIM38-201ENST00000357085 PAGE5Q96GU1 130 aa7.1□□□□□ -1.27
TRIM38-201ENST00000357085 SLC39A2Q9NP94 309 aa7.1□□□□□ -1.27
TRIM38-201ENST00000357085 TIMMDC1Q9NPL8 285 aa7.1□□□□□ -1.27
TRIM38-201ENST00000357085 EPS15L1Q9UBC2 864 aa7.1□□□□□ -1.27
TRIM38-201ENST00000357085 LRWD1Q9UFC0 647 aa7.1□□□□□ -1.27
TRIM38-201ENST00000357085 ACTL7BQ9Y614 415 aa7.1□□□□□ -1.27
TRIM38-201ENST00000357085 PVALEFA0A1B0GWK0 134 aa7.1□□□□□ -1.27
TRIM38-201ENST00000357085 KRT14P02533 472 aa7.1□□□□□ -1.27
TRIM38-201ENST00000357085 KRT15P19012 456 aa7.1□□□□□ -1.27
TRIM38-201ENST00000357085 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.1□□□□□ -1.27
TRIM38-201ENST00000357085 SPDYAQ5MJ70 313 aa7.1□□□□□ -1.27
TRIM38-201ENST00000357085 IRGCQ6NXR0 463 aa7.1□□□□□ -1.27
TRIM38-201ENST00000357085 TMEM154Q6P9G4 183 aa7.1□□□□□ -1.27
TRIM38-201ENST00000357085 CCDC82Q8N4S0 544 aa7.1□□□□□ -1.27
TRIM38-201ENST00000357085 GABPB2Q8TAK5 448 aaPredicted RBP7.1□□□□□ -1.27
TRIM38-201ENST00000357085 PNMA2Q9UL42 364 aa7.1□□□□□ -1.27
TRIM38-201ENST00000357085 BAZ2BQ9UIF8 2168 aaKnown RBP7.1□□□□□ -1.27
TRIM38-201ENST00000357085 NPHP4O75161 1426 aaPredicted RBP7.1□□□□□ -1.27
TRIM38-201ENST00000357085 MGARPQ8TDB4 240 aa7.1□□□□□ -1.27
TRIM38-201ENST00000357085 PITPNM2Q9BZ72 1349 aa7.1□□□□□ -1.27
TRIM38-201ENST00000357085 A8MXQ7 604 aa7.1□□□□□ -1.27
TRIM38-201ENST00000357085 ESRRBO95718 433 aa7.1□□□□□ -1.27
TRIM38-201ENST00000357085 H2AFZP0C0S5 128 aa7.1□□□□□ -1.27
TRIM38-201ENST00000357085 COPS2P61201 443 aa7.1□□□□□ -1.27
TRIM38-201ENST00000357085 H2AFVQ71UI9 128 aa7.1□□□□□ -1.27
TRIM38-201ENST00000357085 MYLK4Q86YV6 388 aaPredicted RBP7.1□□□□□ -1.27
TRIM38-201ENST00000357085 CNOT6LQ96LI5 555 aaKnown RBP7.1□□□□□ -1.27
TRIM38-201ENST00000357085 LRRC10BA6NIK2 292 aa7.1□□□□□ -1.27
TRIM38-201ENST00000357085 BIRC5O15392 142 aa7.1□□□□□ -1.27
TRIM38-201ENST00000357085 TRAPPC3O43617 180 aa7.1□□□□□ -1.27
TRIM38-201ENST00000357085 HNRNPCP07910 306 aaKnown RBP eCLIP7.1□□□□□ -1.27
TRIM38-201ENST00000357085 NFRKBQ6P4R8 1299 aa7.1□□□□□ -1.27
TRIM38-201ENST00000357085 RAB3IL1Q8TBN0 382 aa7.1□□□□□ -1.27
TRIM38-201ENST00000357085 SERPINI1Q99574 410 aa7.1□□□□□ -1.27
TRIM38-201ENST00000357085 GMEB1Q9Y692 573 aa7.1□□□□□ -1.27
TRIM38-201ENST00000357085 KCNK3O14649 394 aa7.1□□□□□ -1.27
TRIM38-201ENST00000357085 PJA2O43164 708 aa7.1□□□□□ -1.27
TRIM38-201ENST00000357085 HOXC9P31274 260 aa7.1□□□□□ -1.27
TRIM38-201ENST00000357085 REXO1Q8N1G1 1221 aaKnown RBP7.1□□□□□ -1.27
TRIM38-201ENST00000357085 TRIM31Q9BZY9 425 aa7.1□□□□□ -1.27
TRIM38-201ENST00000357085 DMAP1Q9NPF5 467 aaPredicted RBP7.1□□□□□ -1.27
TRIM38-201ENST00000357085 MOCS3O95396 460 aa7.09□□□□□ -1.27
TRIM38-201ENST00000357085 GAP43P17677 238 aa7.09□□□□□ -1.27
TRIM38-201ENST00000357085 VHLP40337 213 aa7.09□□□□□ -1.27
TRIM38-201ENST00000357085 ACADVLP49748 655 aa7.09□□□□□ -1.27
TRIM38-201ENST00000357085 PLCB3Q01970 1234 aa7.09□□□□□ -1.27
TRIM38-201ENST00000357085 DNAL1Q4LDG9 190 aa7.09□□□□□ -1.27
TRIM38-201ENST00000357085 MIER3Q7Z3K6 550 aa7.09□□□□□ -1.27
TRIM38-201ENST00000357085 COL23A1Q86Y22 540 aaPredicted RBP7.09□□□□□ -1.27
TRIM38-201ENST00000357085 MB21D1Q8N884 522 aa7.09□□□□□ -1.27
TRIM38-201ENST00000357085 XPO6Q96QU8 1125 aaKnown RBP7.09□□□□□ -1.27
TRIM38-201ENST00000357085 DISC1Q9NRI5 854 aa7.09□□□□□ -1.27
TRIM38-201ENST00000357085 PHF20L1A8MW92 1017 aa7.09□□□□□ -1.27
TRIM38-201ENST00000357085 RNMTO43148 476 aaKnown RBP7.09□□□□□ -1.27
TRIM38-201ENST00000357085 ZNF449Q6P9G9 518 aa7.09□□□□□ -1.27
TRIM38-201ENST00000357085 CCDC25Q86WR0 208 aa7.09□□□□□ -1.27
TRIM38-201ENST00000357085 CCDC105Q8IYK2 499 aa7.09□□□□□ -1.27
TRIM38-201ENST00000357085 FANCBQ8NB91 859 aa7.09□□□□□ -1.27
TRIM38-201ENST00000357085 ZSCAN10Q96SZ4 725 aaPredicted RBP7.09□□□□□ -1.27
TRIM38-201ENST00000357085 SH3BP1Q9Y3L3 701 aa7.09□□□□□ -1.27
TRIM38-201ENST00000357085 MAGEA13PA6NCF6 341 aa7.09□□□□□ -1.27
TRIM38-201ENST00000357085 RRAGAQ7L523 313 aa7.09□□□□□ -1.27
TRIM38-201ENST00000357085 MYOCDQ8IZQ8 938 aa7.09□□□□□ -1.27
TRIM38-201ENST00000357085 TEKT1Q969V4 418 aa7.09□□□□□ -1.27
TRIM38-201ENST00000357085 DCLRE1BQ9H816 532 aa7.09□□□□□ -1.27
TRIM38-201ENST00000357085 A0A0A6YYK5 440 aaPredicted RBP7.09□□□□□ -1.27
TRIM38-201ENST00000357085 B4DLN1 442 aa7.09□□□□□ -1.27
TRIM38-201ENST00000357085 SCG2P13521 617 aa7.09□□□□□ -1.27
TRIM38-201ENST00000357085 IFNAR2P48551 515 aa7.09□□□□□ -1.27
TRIM38-201ENST00000357085 SLC4A8Q2Y0W8 1093 aa7.09□□□□□ -1.27
TRIM38-201ENST00000357085 GRAMD4Q6IC98 578 aa7.09□□□□□ -1.27
TRIM38-201ENST00000357085 ARL8AQ96BM9 186 aa7.09□□□□□ -1.27
TRIM38-201ENST00000357085 NRBF2Q96F24 287 aa7.09□□□□□ -1.27
TRIM38-201ENST00000357085 ELAC2Q9BQ52 826 aaKnown RBP7.09□□□□□ -1.27
TRIM38-201ENST00000357085 MAST3O60307 1309 aa7.09□□□□□ -1.27
TRIM38-201ENST00000357085 HGSO14964 777 aaPredicted RBP7.09□□□□□ -1.27
TRIM38-201ENST00000357085 GFAPP14136 432 aa7.09□□□□□ -1.27
TRIM38-201ENST00000357085 FBLN1P23142 703 aa7.09□□□□□ -1.27
TRIM38-201ENST00000357085 EHHADHQ08426 723 aa7.09□□□□□ -1.27
TRIM38-201ENST00000357085 SPARCL1Q14515 664 aa7.09□□□□□ -1.27
TRIM38-201ENST00000357085 NONOQ15233 471 aaKnown RBP eCLIP7.09□□□□□ -1.27
TRIM38-201ENST00000357085 ACTRT1Q8TDG2 376 aa7.09□□□□□ -1.27
TRIM38-201ENST00000357085 ETNK1Q9HBU6 452 aa7.09□□□□□ -1.27
TRIM38-201ENST00000357085 ABCF2Q9UG63 623 aa7.09□□□□□ -1.27
TRIM38-201ENST00000357085 TMCO1Q9UM00 188 aa7.09□□□□□ -1.27
TRIM38-201ENST00000357085 EXOC7Q9UPT5 735 aa7.09□□□□□ -1.27
TRIM38-201ENST00000357085 CLASP2O75122 1294 aaKnown RBP7.09□□□□□ -1.27
TRIM38-201ENST00000357085 GYPCP04921 128 aa7.09□□□□□ -1.27
TRIM38-201ENST00000357085 EZH1Q92800 747 aaPredicted RBP7.09□□□□□ -1.27
TRIM38-201ENST00000357085 COL4A3BPQ9Y5P4 624 aa7.09□□□□□ -1.27
TRIM38-201ENST00000357085 CCDC189A1A4V9 331 aa7.09□□□□□ -1.28
TRIM38-201ENST00000357085 CDH16O75309 829 aa7.09□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms