RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 SESN3P58005 492 aa13.65□□□□□ -0.22
BDNF-202ENST00000356660 PPP4R3AQ6IN85 833 aa13.65□□□□□ -0.22
BDNF-202ENST00000356660 LRP10Q7Z4F1 713 aa13.65□□□□□ -0.22
BDNF-202ENST00000356660 SYCE1Q8N0S2 351 aa13.65□□□□□ -0.22
BDNF-202ENST00000356660 RBM17Q96I25 401 aaKnown RBP13.65□□□□□ -0.22
BDNF-202ENST00000356660 PIGSQ96S52 555 aa13.65□□□□□ -0.22
BDNF-202ENST00000356660 SH3GL2Q99962 352 aa13.65□□□□□ -0.22
BDNF-202ENST00000356660 CCSER1Q9C0I3 900 aa13.65□□□□□ -0.22
BDNF-202ENST00000356660 EHMT1Q9H9B1 1298 aa13.65□□□□□ -0.22
BDNF-202ENST00000356660 FSBPO95073 299 aa13.64□□□□□ -0.23
BDNF-202ENST00000356660 ACTN1P12814 892 aa13.64□□□□□ -0.23
BDNF-202ENST00000356660 PRDX5P30044 214 aa13.64□□□□□ -0.23
BDNF-202ENST00000356660 SCTRP47872 440 aa13.64□□□□□ -0.23
BDNF-202ENST00000356660 NUGGCQ68CJ6 796 aa13.64□□□□□ -0.23
BDNF-202ENST00000356660 TAOK1Q7L7X3 1001 aa13.64□□□□□ -0.23
BDNF-202ENST00000356660 CAVIN3Q969G5 261 aa13.64□□□□□ -0.23
BDNF-202ENST00000356660 ZMYND12Q9H0C1 365 aa13.64□□□□□ -0.23
BDNF-202ENST00000356660 MAGEF1Q9HAY2 307 aa13.64□□□□□ -0.23
BDNF-202ENST00000356660 PLCB1Q9NQ66 1216 aa13.64□□□□□ -0.23
BDNF-202ENST00000356660 HOMER2Q9NSB8 354 aa13.64□□□□□ -0.23
BDNF-202ENST00000356660 NKIRAS1Q9NYS0 192 aa13.64□□□□□ -0.23
BDNF-202ENST00000356660 TPX2Q9ULW0 747 aaKnown RBP13.64□□□□□ -0.23
BDNF-202ENST00000356660 TACC3Q9Y6A5 838 aa13.64□□□□□ -0.23
BDNF-202ENST00000356660 TRIM37O94972 964 aa13.64□□□□□ -0.23
BDNF-202ENST00000356660 EPB41P11171 864 aaKnown RBP13.64□□□□□ -0.23
BDNF-202ENST00000356660 CTNNA2P26232 953 aa13.64□□□□□ -0.23
BDNF-202ENST00000356660 STX2P32856 288 aa13.64□□□□□ -0.23
BDNF-202ENST00000356660 UNC13DQ70J99 1090 aa13.64□□□□□ -0.23
BDNF-202ENST00000356660 ADGRA1Q86SQ6 560 aa13.64□□□□□ -0.23
BDNF-202ENST00000356660 NEK9Q8TD19 979 aa13.64□□□□□ -0.23
BDNF-202ENST00000356660 PBKQ96KB5 322 aa13.64□□□□□ -0.23
BDNF-202ENST00000356660 AZI2Q9H6S1 392 aa13.64□□□□□ -0.23
BDNF-202ENST00000356660 FAM114A2Q9NRY5 505 aa13.64□□□□□ -0.23
BDNF-202ENST00000356660 USP40Q9NVE5 1235 aa13.64□□□□□ -0.23
BDNF-202ENST00000356660 CEP72Q9P209 647 aa13.64□□□□□ -0.23
BDNF-202ENST00000356660 ARPP21Q9UBL0 812 aaPredicted RBP13.64□□□□□ -0.23
BDNF-202ENST00000356660 TBK1Q9UHD2 729 aa13.64□□□□□ -0.23
BDNF-202ENST00000356660 PCDHA6Q9UN73 950 aa13.64□□□□□ -0.23
BDNF-202ENST00000356660 PCDHA8Q9Y5H6 950 aa13.64□□□□□ -0.23
BDNF-202ENST00000356660 PNPLA7Q6ZV29 1317 aa13.64□□□□□ -0.23
BDNF-202ENST00000356660 MYMKA6NI61 221 aa13.64□□□□□ -0.23
BDNF-202ENST00000356660 CLIC2O15247 247 aa13.64□□□□□ -0.23
BDNF-202ENST00000356660 DIAPH2O60879 1101 aa13.64□□□□□ -0.23
BDNF-202ENST00000356660 HIP1RO75146 1068 aa13.64□□□□□ -0.23
BDNF-202ENST00000356660 ADCY7P51828 1080 aa13.64□□□□□ -0.23
BDNF-202ENST00000356660 LRRC63Q05C16 580 aa13.64□□□□□ -0.23
BDNF-202ENST00000356660 SETDB1Q15047 1291 aa13.64□□□□□ -0.23
BDNF-202ENST00000356660 KIF2BQ8N4N8 673 aa13.64□□□□□ -0.23
BDNF-202ENST00000356660 USP38Q8NB14 1042 aa13.64□□□□□ -0.23
BDNF-202ENST00000356660 NAP1L3Q99457 506 aaPredicted RBP13.64□□□□□ -0.23
BDNF-202ENST00000356660 SEMA6BQ9H3T3 888 aa13.64□□□□□ -0.23
BDNF-202ENST00000356660 LAD1O00515 517 aa13.63□□□□□ -0.23
BDNF-202ENST00000356660 GCNT3O95395 438 aa13.63□□□□□ -0.23
BDNF-202ENST00000356660 MECOMQ03112 1051 aa13.63□□□□□ -0.23
BDNF-202ENST00000356660 TRIM28Q13263 835 aaKnown RBP13.63□□□□□ -0.23
BDNF-202ENST00000356660 ARMC9Q7Z3E5 817 aa13.63□□□□□ -0.23
BDNF-202ENST00000356660 NSMCE1Q8WV22 266 aa13.63□□□□□ -0.23
BDNF-202ENST00000356660 TRIM7Q9C029 511 aa13.63□□□□□ -0.23
BDNF-202ENST00000356660 L3MBTL1Q9Y468 752 aa13.63□□□□□ -0.23
BDNF-202ENST00000356660 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.63□□□□□ -0.23
BDNF-202ENST00000356660 GRIN2DO15399 1336 aa13.63□□□□□ -0.23
BDNF-202ENST00000356660 PRKG1Q13976 671 aa13.63□□□□□ -0.23
BDNF-202ENST00000356660 SEL1L2Q5TEA6 688 aa13.63□□□□□ -0.23
BDNF-202ENST00000356660 RPUSD2Q8IZ73 545 aaKnown RBP13.63□□□□□ -0.23
BDNF-202ENST00000356660 DCP1AQ9NPI6 582 aaPredicted RBP13.63□□□□□ -0.23
BDNF-202ENST00000356660 HOMER3Q9NSC5 361 aa13.63□□□□□ -0.23
BDNF-202ENST00000356660 HARSP12081 509 aaKnown RBP13.63□□□□□ -0.23
BDNF-202ENST00000356660 CHN1P15882 459 aa13.63□□□□□ -0.23
BDNF-202ENST00000356660 GCFC2P16383 781 aaKnown RBP13.63□□□□□ -0.23
BDNF-202ENST00000356660 FAM196AQ6ZSG2 479 aa13.63□□□□□ -0.23
BDNF-202ENST00000356660 FUKQ8N0W3 1084 aa13.63□□□□□ -0.23
BDNF-202ENST00000356660 NOD2Q9HC29 1040 aa13.63□□□□□ -0.23
BDNF-202ENST00000356660 ZNF804BA4D1E1 1349 aa13.63□□□□□ -0.23
BDNF-202ENST00000356660 MYH8P13535 1937 aa13.63□□□□□ -0.23
BDNF-202ENST00000356660 PRLRP16471 622 aa13.62□□□□□ -0.23
BDNF-202ENST00000356660 DR1Q01658 176 aa13.62□□□□□ -0.23
BDNF-202ENST00000356660 KCNH2Q12809 1159 aa13.62□□□□□ -0.23
BDNF-202ENST00000356660 SLC18A3Q16572 532 aa13.62□□□□□ -0.23
BDNF-202ENST00000356660 MTA3Q9BTC8 594 aa13.62□□□□□ -0.23
BDNF-202ENST00000356660 CNOT10Q9H9A5 744 aaKnown RBP13.62□□□□□ -0.23
BDNF-202ENST00000356660 TMBIM4Q9HC24 238 aa13.62□□□□□ -0.23
BDNF-202ENST00000356660 RIC8AQ9NPQ8 531 aa13.62□□□□□ -0.23
BDNF-202ENST00000356660 HDAC9Q9UKV0 1011 aa13.62□□□□□ -0.23
BDNF-202ENST00000356660 MEIS1O00470 390 aa13.62□□□□□ -0.23
BDNF-202ENST00000356660 LRRN2O75325 713 aa13.62□□□□□ -0.23
BDNF-202ENST00000356660 SUN1O94901 812 aa13.62□□□□□ -0.23
BDNF-202ENST00000356660 ACSL3O95573 720 aa13.62□□□□□ -0.23
BDNF-202ENST00000356660 CYP4A11Q02928 519 aa13.62□□□□□ -0.23
BDNF-202ENST00000356660 DPH6Q7L8W6 267 aa13.62□□□□□ -0.23
BDNF-202ENST00000356660 ANKS1AQ92625 1134 aa13.62□□□□□ -0.23
BDNF-202ENST00000356660 LBHD1Q9BQE6 289 aaPredicted RBP13.62□□□□□ -0.23
BDNF-202ENST00000356660 KBTBD4Q9NVX7 518 aa13.62□□□□□ -0.23
BDNF-202ENST00000356660 NOP53Q9NZM5 478 aaKnown RBP13.62□□□□□ -0.23
BDNF-202ENST00000356660 SALL4Q9UJQ4 1053 aa13.62□□□□□ -0.23
BDNF-202ENST00000356660 MTUS1Q9ULD2 1270 aa13.62□□□□□ -0.23
BDNF-202ENST00000356660 RPL13P26373 211 aaKnown RBP13.62□□□□□ -0.23
BDNF-202ENST00000356660 ERVK-9P63128 1117 aa13.62□□□□□ -0.23
BDNF-202ENST00000356660 EVX2Q03828 476 aa13.62□□□□□ -0.23
BDNF-202ENST00000356660 PABPC4Q13310 644 aaKnown RBP eCLIP13.62□□□□□ -0.23
BDNF-202ENST00000356660 TAF11Q15544 211 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms