RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 ADAM30Q9UKF2 790 aa8.61□□□□□ -1.03
HTT-201ENST00000355072 L3MBTL1Q9Y468 752 aa8.61□□□□□ -1.03
HTT-201ENST00000355072 NOS1P29475 1434 aa8.61□□□□□ -1.03
HTT-201ENST00000355072 ABCC4O15439 1325 aa8.61□□□□□ -1.03
HTT-201ENST00000355072 DENND4BO75064 1496 aaPredicted RBP8.61□□□□□ -1.03
HTT-201ENST00000355072 LETM2Q2VYF4 491 aa8.61□□□□□ -1.03
HTT-201ENST00000355072 SLC27A2O14975 620 aa8.6□□□□□ -1.03
HTT-201ENST00000355072 SERPING1P05155 500 aa8.6□□□□□ -1.03
HTT-201ENST00000355072 SNX25Q9H3E2 840 aa8.6□□□□□ -1.03
HTT-201ENST00000355072 SENP3Q9H4L4 574 aaPredicted RBP8.6□□□□□ -1.03
HTT-201ENST00000355072 CAAP1Q9H8G2 361 aa8.6□□□□□ -1.03
HTT-201ENST00000355072 FANCEQ9HB96 536 aa8.6□□□□□ -1.03
HTT-201ENST00000355072 PRDM11Q9NQV5 511 aa8.6□□□□□ -1.03
HTT-201ENST00000355072 RPL26L1Q9UNX3 145 aaKnown RBP8.6□□□□□ -1.03
HTT-201ENST00000355072 NR1I2O75469 434 aa8.6□□□□□ -1.03
HTT-201ENST00000355072 HEXIM1O94992 359 aaKnown RBP8.6□□□□□ -1.03
HTT-201ENST00000355072 GRAMD1BQ3KR37 738 aa8.6□□□□□ -1.03
HTT-201ENST00000355072 KIAA0825Q8IV33 1275 aa8.6□□□□□ -1.03
HTT-201ENST00000355072 NUDCD1Q96RS6 583 aa8.6□□□□□ -1.03
HTT-201ENST00000355072 INO80Q9ULG1 1556 aaPredicted RBP8.6□□□□□ -1.03
HTT-201ENST00000355072 ZNF658Q5TYW1 1059 aaPredicted RBP8.6□□□□□ -1.03
HTT-201ENST00000355072 KIAA2013Q8IYS2 634 aa8.6□□□□□ -1.03
HTT-201ENST00000355072 KIF17Q9P2E2 1029 aa8.6□□□□□ -1.03
HTT-201ENST00000355072 AFG3L2Q9Y4W6 797 aa8.6□□□□□ -1.03
HTT-201ENST00000355072 LRRC43Q8N309 656 aa8.6□□□□□ -1.03
HTT-201ENST00000355072 MSL3Q8N5Y2 521 aaKnown RBP8.6□□□□□ -1.03
HTT-201ENST00000355072 HIC2Q96JB3 615 aa8.6□□□□□ -1.03
HTT-201ENST00000355072 CEP72Q9P209 647 aa8.6□□□□□ -1.03
HTT-201ENST00000355072 LRCH1Q9Y2L9 728 aa8.6□□□□□ -1.03
HTT-201ENST00000355072 PCSK2P16519 638 aa8.6□□□□□ -1.03
HTT-201ENST00000355072 MTX1Q13505 466 aa8.6□□□□□ -1.03
HTT-201ENST00000355072 MAN2A1Q16706 1144 aa8.6□□□□□ -1.03
HTT-201ENST00000355072 AGBL2Q5U5Z8 902 aa8.6□□□□□ -1.03
HTT-201ENST00000355072 DCTN2Q13561 401 aaKnown RBP8.6□□□□□ -1.03
HTT-201ENST00000355072 TP53BP2Q13625 1128 aa8.6□□□□□ -1.03
HTT-201ENST00000355072 KBTBD12Q3ZCT8 623 aa8.6□□□□□ -1.03
HTT-201ENST00000355072 TUBGCP2Q9BSJ2 902 aa8.6□□□□□ -1.03
HTT-201ENST00000355072 ATP11BQ9Y2G3 1177 aa8.6□□□□□ -1.03
HTT-201ENST00000355072 USP14P54578 494 aa8.6□□□□□ -1.03
HTT-201ENST00000355072 THAP11Q96EK4 314 aa8.6□□□□□ -1.03
HTT-201ENST00000355072 TIMMDC1Q9NPL8 285 aa8.6□□□□□ -1.03
HTT-201ENST00000355072 WARS2Q9UGM6 360 aaKnown RBP8.6□□□□□ -1.03
HTT-201ENST00000355072 TNNI2P48788 182 aa8.6□□□□□ -1.03
HTT-201ENST00000355072 ATP1A2P50993 1020 aa8.6□□□□□ -1.03
HTT-201ENST00000355072 LSG1Q9H089 658 aaKnown RBP8.6□□□□□ -1.03
HTT-201ENST00000355072 CPSF1Q10570 1443 aaKnown RBP8.6□□□□□ -1.03
HTT-201ENST00000355072 NR5A1Q13285 461 aa8.6□□□□□ -1.03
HTT-201ENST00000355072 ITIH4Q14624 930 aa8.6□□□□□ -1.03
HTT-201ENST00000355072 NLRP9Q7RTR0 991 aa8.6□□□□□ -1.03
HTT-201ENST00000355072 CDCA7Q9BWT1 371 aaPredicted RBP8.6□□□□□ -1.03
HTT-201ENST00000355072 PI4KAP2A4QPH2 592 aa8.6□□□□□ -1.03
HTT-201ENST00000355072 ATP5JP18859 108 aa8.6□□□□□ -1.03
HTT-201ENST00000355072 IL10P22301 178 aa8.6□□□□□ -1.03
HTT-201ENST00000355072 ATP2B4P23634 1241 aa8.6□□□□□ -1.03
HTT-201ENST00000355072 ARL4CP56559 192 aa8.6□□□□□ -1.03
HTT-201ENST00000355072 GPATCH4Q5T3I0 446 aaKnown RBP8.6□□□□□ -1.03
HTT-201ENST00000355072 PI4KAP1Q8N8J0 262 aa8.6□□□□□ -1.03
HTT-201ENST00000355072 PBXIP1Q96AQ6 731 aa8.6□□□□□ -1.03
HTT-201ENST00000355072 APPL1Q9UKG1 709 aa8.6□□□□□ -1.03
HTT-201ENST00000355072 MAP3K4Q9Y6R4 1608 aa8.6□□□□□ -1.03
HTT-201ENST00000355072 NXNQ6DKJ4 435 aa8.6□□□□□ -1.03
HTT-201ENST00000355072 ZFP1Q6P2D0 407 aa8.6□□□□□ -1.03
HTT-201ENST00000355072 SNF8Q96H20 258 aa8.6□□□□□ -1.03
HTT-201ENST00000355072 PRRG3Q9BZD7 231 aa8.6□□□□□ -1.03
HTT-201ENST00000355072 ATP8A2Q9NTI2 1148 aa8.6□□□□□ -1.03
HTT-201ENST00000355072 PCDHB15Q9Y5E8 787 aa8.6□□□□□ -1.03
HTT-201ENST00000355072 ANKRD26Q9UPS8 1709 aa8.59□□□□□ -1.03
HTT-201ENST00000355072 POTEMA6NI47 508 aa8.59□□□□□ -1.03
HTT-201ENST00000355072 MFAP3P55082 362 aa8.59□□□□□ -1.03
HTT-201ENST00000355072 POTEHQ6S545 545 aa8.59□□□□□ -1.03
HTT-201ENST00000355072 POTEGQ6S5H5 508 aa8.59□□□□□ -1.03
HTT-201ENST00000355072 LUZP2Q86TE4 346 aa8.59□□□□□ -1.03
HTT-201ENST00000355072 PSMA8Q8TAA3 256 aa8.59□□□□□ -1.03
HTT-201ENST00000355072 ATG3Q9NT62 314 aa8.59□□□□□ -1.03
HTT-201ENST00000355072 HGSO14964 777 aaPredicted RBP8.59□□□□□ -1.03
HTT-201ENST00000355072 ARL13BQ3SXY8 428 aa8.59□□□□□ -1.03
HTT-201ENST00000355072 TMEM259Q4ZIN3 620 aa8.59□□□□□ -1.03
HTT-201ENST00000355072 SUGP1Q8IWZ8 645 aaKnown RBP8.59□□□□□ -1.03
HTT-201ENST00000355072 ATP11CQ8NB49 1132 aa8.59□□□□□ -1.03
HTT-201ENST00000355072 ZNF555Q8NEP9 628 aa8.59□□□□□ -1.03
HTT-201ENST00000355072 LARP4BQ92615 738 aaKnown RBP8.59□□□□□ -1.03
HTT-201ENST00000355072 MRPL48Q96GC5 212 aaKnown RBP8.59□□□□□ -1.03
HTT-201ENST00000355072 PHACTR1Q9C0D0 580 aa8.59□□□□□ -1.03
HTT-201ENST00000355072 ADCY7P51828 1080 aa8.59□□□□□ -1.03
HTT-201ENST00000355072 CC2D1AQ6P1N0 951 aaPredicted RBP8.59□□□□□ -1.03
HTT-201ENST00000355072 FRMD8P1Q9BZ68 369 aaPredicted RBP8.59□□□□□ -1.03
HTT-201ENST00000355072 YIPF3Q9GZM5 350 aa8.59□□□□□ -1.03
HTT-201ENST00000355072 A8MXQ7 604 aa8.59□□□□□ -1.03
HTT-201ENST00000355072 BFSP2Q13515 415 aa8.59□□□□□ -1.03
HTT-201ENST00000355072 STAT4Q14765 748 aa8.59□□□□□ -1.03
HTT-201ENST00000355072 TAF12Q16514 161 aa8.59□□□□□ -1.03
HTT-201ENST00000355072 TLK1Q9UKI8 766 aa8.59□□□□□ -1.03
HTT-201ENST00000355072 PRR23D1E9PI22 279 aaPredicted RBP8.59□□□□□ -1.03
HTT-201ENST00000355072 PRR23D2P0DMB1 279 aaPredicted RBP8.59□□□□□ -1.03
HTT-201ENST00000355072 CORO7P57737 925 aa8.59□□□□□ -1.03
HTT-201ENST00000355072 TRMT10CQ7L0Y3 403 aaKnown RBP8.59□□□□□ -1.03
HTT-201ENST00000355072 WNT8AQ9H1J5 351 aa8.59□□□□□ -1.03
HTT-201ENST00000355072 KIAA1586Q9HCI6 787 aa8.59□□□□□ -1.03
HTT-201ENST00000355072 TBC1D7Q9P0N9 293 aa8.59□□□□□ -1.03
HTT-201ENST00000355072 RAP1GAPP47736 663 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms