RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 TMX4Q9H1E5 349 aaPredicted RBP21.5■■□□□ 1.03
COL13A1-201ENST00000354547 BHMT2Q9H2M3 363 aa21.5■■□□□ 1.03
COL13A1-201ENST00000354547 RGL1Q9NZL6 768 aa21.5■■□□□ 1.03
COL13A1-201ENST00000354547 PRLRP16471 622 aa21.5■■□□□ 1.03
COL13A1-201ENST00000354547 NOP2P46087 812 aaKnown RBP21.5■■□□□ 1.03
COL13A1-201ENST00000354547 USP11P51784 963 aa21.5■■□□□ 1.03
COL13A1-201ENST00000354547 GIT2Q14161 759 aa21.5■■□□□ 1.03
COL13A1-201ENST00000354547 HYIQ5T013 277 aa21.5■■□□□ 1.03
COL13A1-201ENST00000354547 MYH4Q9Y623 1939 aa21.49■■□□□ 1.03
COL13A1-201ENST00000354547 CHMP2AO43633 222 aa21.49■■□□□ 1.03
COL13A1-201ENST00000354547 GLI1P08151 1106 aa21.49■■□□□ 1.03
COL13A1-201ENST00000354547 GUCY2DQ02846 1103 aa21.49■■□□□ 1.03
COL13A1-201ENST00000354547 SLC18A3Q16572 532 aa21.49■■□□□ 1.03
COL13A1-201ENST00000354547 PIGOQ8TEQ8 1089 aa21.49■■□□□ 1.03
COL13A1-201ENST00000354547 KRT12Q99456 494 aa21.49■■□□□ 1.03
COL13A1-201ENST00000354547 ARMCX3Q9UH62 379 aaPredicted RBP21.49■■□□□ 1.03
COL13A1-201ENST00000354547 NFU1Q9UMS0 254 aa21.49■■□□□ 1.03
COL13A1-201ENST00000354547 GNA14O95837 355 aa21.49■■□□□ 1.03
COL13A1-201ENST00000354547 GUCY2FP51841 1108 aa21.49■■□□□ 1.03
COL13A1-201ENST00000354547 PPARDQ03181 441 aa21.49■■□□□ 1.03
COL13A1-201ENST00000354547 PTK2Q05397 1052 aa21.49■■□□□ 1.03
COL13A1-201ENST00000354547 MSL1Q68DK7 614 aa21.49■■□□□ 1.03
COL13A1-201ENST00000354547 CCDC17Q96LX7 622 aa21.49■■□□□ 1.03
COL13A1-201ENST00000354547 EDEM3Q9BZQ6 932 aa21.49■■□□□ 1.03
COL13A1-201ENST00000354547 EPB41L5Q9HCM4 733 aa21.49■■□□□ 1.03
COL13A1-201ENST00000354547 PCDHB13Q9Y5F0 798 aa21.49■■□□□ 1.03
COL13A1-201ENST00000354547 CARSP49589 748 aaKnown RBP21.48■■□□□ 1.03
COL13A1-201ENST00000354547 CASP4P49662 377 aa21.48■■□□□ 1.03
COL13A1-201ENST00000354547 UBXN2AP68543 259 aa21.48■■□□□ 1.03
COL13A1-201ENST00000354547 TRADDQ15628 312 aa21.48■■□□□ 1.03
COL13A1-201ENST00000354547 HHIPL2Q6UWX4 724 aa21.48■■□□□ 1.03
COL13A1-201ENST00000354547 SH3BP5LQ7L8J4 393 aa21.48■■□□□ 1.03
COL13A1-201ENST00000354547 SIAH1Q8IUQ4 282 aa21.48■■□□□ 1.03
COL13A1-201ENST00000354547 KLHL7Q8IXQ5 586 aa21.48■■□□□ 1.03
COL13A1-201ENST00000354547 SLFN12Q8IYM2 578 aa21.48■■□□□ 1.03
COL13A1-201ENST00000354547 FAM76AQ8TAV0 307 aa21.48■■□□□ 1.03
COL13A1-201ENST00000354547 EHD4Q9H223 541 aa21.48■■□□□ 1.03
COL13A1-201ENST00000354547 LUC7LQ9NQ29 371 aaKnown RBP21.48■■□□□ 1.03
COL13A1-201ENST00000354547 SUGT1Q9Y2Z0 365 aa21.48■■□□□ 1.03
COL13A1-201ENST00000354547 GCNT3O95395 438 aa21.48■■□□□ 1.03
COL13A1-201ENST00000354547 NAB2Q15742 525 aa21.48■■□□□ 1.03
COL13A1-201ENST00000354547 GJB7Q6PEY0 223 aa21.48■■□□□ 1.03
COL13A1-201ENST00000354547 FBXO11Q86XK2 927 aa21.48■■□□□ 1.03
COL13A1-201ENST00000354547 RNF10Q8N5U6 811 aaKnown RBP21.48■■□□□ 1.03
COL13A1-201ENST00000354547 AMNQ9BXJ7 453 aa21.48■■□□□ 1.03
COL13A1-201ENST00000354547 RRP15Q9Y3B9 282 aaKnown RBP21.48■■□□□ 1.03
COL13A1-201ENST00000354547 AFF2P51816 1311 aa21.48■■□□□ 1.03
COL13A1-201ENST00000354547 MYO1CO00159 1063 aa21.47■■□□□ 1.03
COL13A1-201ENST00000354547 SPATA31C1P0DKV0 1188 aa21.47■■□□□ 1.03
COL13A1-201ENST00000354547 ETNPPLQ8TBG4 499 aa21.47■■□□□ 1.03
COL13A1-201ENST00000354547 RUFY1Q96T51 708 aa21.47■■□□□ 1.03
COL13A1-201ENST00000354547 NUCKS1Q9H1E3 243 aaKnown RBP21.47■■□□□ 1.03
COL13A1-201ENST00000354547 FAM198AQ9UFP1 575 aa21.47■■□□□ 1.03
COL13A1-201ENST00000354547 TULP2O00295 520 aa21.47■■□□□ 1.03
COL13A1-201ENST00000354547 HEXIM1O94992 359 aaKnown RBP21.47■■□□□ 1.03
COL13A1-201ENST00000354547 KCTD16Q68DU8 428 aa21.47■■□□□ 1.03
COL13A1-201ENST00000354547 LY75O60449 1722 aa21.47■■□□□ 1.03
COL13A1-201ENST00000354547 ZBTB39O15060 712 aa21.47■■□□□ 1.03
COL13A1-201ENST00000354547 FAM153BP0C7A2 387 aa21.47■■□□□ 1.03
COL13A1-201ENST00000354547 HOXD13P35453 343 aa21.47■■□□□ 1.03
COL13A1-201ENST00000354547 SPIRE1Q08AE8 756 aa21.47■■□□□ 1.03
COL13A1-201ENST00000354547 KNOP1Q1ED39 458 aaKnown RBP21.47■■□□□ 1.03
COL13A1-201ENST00000354547 FAM153CQ494X1 144 aa21.47■■□□□ 1.03
COL13A1-201ENST00000354547 KSR1Q8IVT5 923 aa21.47■■□□□ 1.03
COL13A1-201ENST00000354547 ERMNQ8TAM6 284 aa21.47■■□□□ 1.03
COL13A1-201ENST00000354547 RUSC1Q9BVN2 902 aa21.47■■□□□ 1.03
COL13A1-201ENST00000354547 GANQ9H2C0 597 aa21.47■■□□□ 1.03
COL13A1-201ENST00000354547 PI4KBQ9UBF8 816 aa21.47■■□□□ 1.03
COL13A1-201ENST00000354547 FAM153AQ9UHL3 310 aa21.47■■□□□ 1.03
COL13A1-201ENST00000354547 AKAP3O75969 853 aa21.46■■□□□ 1.03
COL13A1-201ENST00000354547 NDUFB10O96000 172 aa21.46■■□□□ 1.03
COL13A1-201ENST00000354547 IVLP07476 585 aa21.46■■□□□ 1.03
COL13A1-201ENST00000354547 JAG1P78504 1218 aa21.46■■□□□ 1.03
COL13A1-201ENST00000354547 CTTNQ14247 550 aaKnown RBP21.46■■□□□ 1.03
COL13A1-201ENST00000354547 ZNF571Q7Z3V5 609 aaPredicted RBP21.46■■□□□ 1.03
COL13A1-201ENST00000354547 NAP1L4Q99733 375 aaKnown RBP21.46■■□□□ 1.03
COL13A1-201ENST00000354547 RBAK-RBAKDNI3L0D1 243 aa21.46■■□□□ 1.03
COL13A1-201ENST00000354547 KCNK3O14649 394 aa21.46■■□□□ 1.03
COL13A1-201ENST00000354547 XRCC5P13010 732 aaKnown RBP21.46■■□□□ 1.03
COL13A1-201ENST00000354547 EXOC3L4Q17RC7 722 aa21.46■■□□□ 1.03
COL13A1-201ENST00000354547 MSH4O15457 936 aa21.45■■□□□ 1.02
COL13A1-201ENST00000354547 GH2P01242 217 aa21.45■■□□□ 1.02
COL13A1-201ENST00000354547 UCHL3P15374 230 aa21.45■■□□□ 1.02
COL13A1-201ENST00000354547 POLD1P28340 1107 aa21.45■■□□□ 1.02
COL13A1-201ENST00000354547 EPHB4P54760 987 aa21.45■■□□□ 1.02
COL13A1-201ENST00000354547 ARL8AQ96BM9 186 aa21.45■■□□□ 1.02
COL13A1-201ENST00000354547 TDRD3Q9H7E2 651 aaKnown RBP21.45■■□□□ 1.02
COL13A1-201ENST00000354547 KLRG2A4D1S0 409 aaPredicted RBP21.45■■□□□ 1.02
COL13A1-201ENST00000354547 GRID2IPA4D2P6 1211 aa21.45■■□□□ 1.02
COL13A1-201ENST00000354547 EML1O00423 815 aa21.45■■□□□ 1.02
COL13A1-201ENST00000354547 AFPP02771 609 aaKnown RBP21.45■■□□□ 1.02
COL13A1-201ENST00000354547 ABCB5Q2M3G0 1257 aa21.45■■□□□ 1.02
COL13A1-201ENST00000354547 SRLQ86TD4 932 aa21.45■■□□□ 1.02
COL13A1-201ENST00000354547 DCAF4Q8WV16 495 aa21.45■■□□□ 1.02
COL13A1-201ENST00000354547 SYN2Q92777 582 aaPredicted RBP21.45■■□□□ 1.02
COL13A1-201ENST00000354547 FEZ2Q9UHY8 353 aaPredicted RBP21.45■■□□□ 1.02
COL13A1-201ENST00000354547 ARFGEF1Q9Y6D6 1849 aa21.45■■□□□ 1.02
COL13A1-201ENST00000354547 ZNF572Q7Z3I7 529 aaPredicted RBP21.45■■□□□ 1.02
COL13A1-201ENST00000354547 TPH2Q8IWU9 490 aa21.45■■□□□ 1.02
COL13A1-201ENST00000354547 LENG9Q96B70 501 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms