RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 ZNF496Q96IT1 587 aaPredicted RBP8.61□□□□□ -1.03
SCN8A-201ENST00000354534 BEGAINQ9BUH8 593 aa8.61□□□□□ -1.03
SCN8A-201ENST00000354534 TSR3Q9UJK0 312 aaKnown RBP8.61□□□□□ -1.03
SCN8A-201ENST00000354534 CCDC151A5D8V7 595 aa8.61□□□□□ -1.03
SCN8A-201ENST00000354534 SNRPA1P09661 255 aaKnown RBP8.61□□□□□ -1.03
SCN8A-201ENST00000354534 AP1S2P56377 157 aa8.61□□□□□ -1.03
SCN8A-201ENST00000354534 LRRC36Q1X8D7 754 aa8.61□□□□□ -1.03
SCN8A-201ENST00000354534 KIF2CQ99661 725 aa8.61□□□□□ -1.03
SCN8A-201ENST00000354534 PCF11O94913 1555 aaKnown RBP8.6□□□□□ -1.03
SCN8A-201ENST00000354534 RNF113AO15541 343 aaKnown RBP8.6□□□□□ -1.03
SCN8A-201ENST00000354534 LRRC74AQ0VAA2 488 aa8.6□□□□□ -1.03
SCN8A-201ENST00000354534 MDM1Q8TC05 714 aa8.6□□□□□ -1.03
SCN8A-201ENST00000354534 CASS4Q9NQ75 786 aa8.6□□□□□ -1.03
SCN8A-201ENST00000354534 RTEL1Q9NZ71 1219 aa8.6□□□□□ -1.03
SCN8A-201ENST00000354534 KCNG1Q9UIX4 513 aa8.6□□□□□ -1.03
SCN8A-201ENST00000354534 MAPK4P31152 587 aa8.6□□□□□ -1.03
SCN8A-201ENST00000354534 BZW1Q7L1Q6 419 aaKnown RBP8.6□□□□□ -1.03
SCN8A-201ENST00000354534 MID2Q9UJV3 735 aa8.6□□□□□ -1.03
SCN8A-201ENST00000354534 CA4P22748 312 aa8.6□□□□□ -1.03
SCN8A-201ENST00000354534 CCDC60Q8IWA6 550 aaPredicted RBP8.6□□□□□ -1.03
SCN8A-201ENST00000354534 DIS3LQ8TF46 1054 aaKnown RBP8.6□□□□□ -1.03
SCN8A-201ENST00000354534 AK9Q5TCS8 1911 aa8.6□□□□□ -1.03
SCN8A-201ENST00000354534 XPOTO43592 962 aaKnown RBP8.6□□□□□ -1.03
SCN8A-201ENST00000354534 TAF1BQ53T94 588 aaPredicted RBP8.6□□□□□ -1.03
SCN8A-201ENST00000354534 ZNF467Q7Z7K2 595 aaPredicted RBP8.6□□□□□ -1.03
SCN8A-201ENST00000354534 DEPTORQ8TB45 409 aa8.6□□□□□ -1.03
SCN8A-201ENST00000354534 DHX38Q92620 1227 aaKnown RBP8.6□□□□□ -1.03
SCN8A-201ENST00000354534 PPP1R36Q96LQ0 422 aa8.6□□□□□ -1.03
SCN8A-201ENST00000354534 ARHGEF10LQ9HCE6 1279 aa8.6□□□□□ -1.03
SCN8A-201ENST00000354534 TPCN1Q9ULQ1 816 aa8.6□□□□□ -1.03
SCN8A-201ENST00000354534 GOLGA8JA6NMD2 632 aa8.6□□□□□ -1.03
SCN8A-201ENST00000354534 M0R3G1 203 aa8.6□□□□□ -1.03
SCN8A-201ENST00000354534 GOLGA8HP0CJ92 632 aa8.6□□□□□ -1.03
SCN8A-201ENST00000354534 MCCD1P59942 119 aaPredicted RBP8.6□□□□□ -1.03
SCN8A-201ENST00000354534 TP53BP2Q13625 1128 aa8.6□□□□□ -1.03
SCN8A-201ENST00000354534 ADCK5Q3MIX3 580 aa8.6□□□□□ -1.03
SCN8A-201ENST00000354534 MPP4Q96JB8 637 aa8.6□□□□□ -1.03
SCN8A-201ENST00000354534 PRPF18Q99633 342 aaKnown RBP8.6□□□□□ -1.03
SCN8A-201ENST00000354534 ZMYND12Q9H0C1 365 aa8.6□□□□□ -1.03
SCN8A-201ENST00000354534 PANK4Q9NVE7 773 aa8.6□□□□□ -1.03
SCN8A-201ENST00000354534 SOS1Q07889 1333 aaPredicted RBP8.6□□□□□ -1.03
SCN8A-201ENST00000354534 IQGAP2Q13576 1575 aa8.6□□□□□ -1.03
SCN8A-201ENST00000354534 ACSL3O95573 720 aa8.6□□□□□ -1.03
SCN8A-201ENST00000354534 SERPINB3P29508 390 aa8.6□□□□□ -1.03
SCN8A-201ENST00000354534 TRIP13Q15645 432 aaPredicted RBP8.6□□□□□ -1.03
SCN8A-201ENST00000354534 ARL13BQ3SXY8 428 aa8.6□□□□□ -1.03
SCN8A-201ENST00000354534 FBXO18Q8NFZ0 1043 aa8.6□□□□□ -1.03
SCN8A-201ENST00000354534 BTBD6Q96KE9 485 aa8.6□□□□□ -1.03
SCN8A-201ENST00000354534 KIFC1Q9BW19 673 aa8.6□□□□□ -1.03
SCN8A-201ENST00000354534 IVNS1ABPQ9Y6Y0 642 aa8.6□□□□□ -1.03
SCN8A-201ENST00000354534 SNAPC4Q5SXM2 1469 aa8.6□□□□□ -1.03
SCN8A-201ENST00000354534 TK2O00142 265 aa8.6□□□□□ -1.03
SCN8A-201ENST00000354534 MYO1FO00160 1098 aa8.6□□□□□ -1.03
SCN8A-201ENST00000354534 PTPREP23469 700 aa8.6□□□□□ -1.03
SCN8A-201ENST00000354534 EPM2AIP1Q7L775 607 aaPredicted RBP8.6□□□□□ -1.03
SCN8A-201ENST00000354534 CATSPER1Q8NEC5 780 aa8.6□□□□□ -1.03
SCN8A-201ENST00000354534 LRRC59Q96AG4 307 aaKnown RBP8.6□□□□□ -1.03
SCN8A-201ENST00000354534 DCTN4Q9UJW0 460 aa8.6□□□□□ -1.03
SCN8A-201ENST00000354534 STON1Q9Y6Q2 735 aa8.6□□□□□ -1.03
SCN8A-201ENST00000354534 SFI1A8K8P3 1242 aa8.6□□□□□ -1.03
SCN8A-201ENST00000354534 CPXCR1Q8N123 301 aa8.6□□□□□ -1.03
SCN8A-201ENST00000354534 RABGGTAQ92696 567 aa8.6□□□□□ -1.03
SCN8A-201ENST00000354534 EIF2S1P05198 315 aaKnown RBP8.6□□□□□ -1.03
SCN8A-201ENST00000354534 RPS6P62753 249 aaKnown RBP8.6□□□□□ -1.03
SCN8A-201ENST00000354534 KRT76Q01546 638 aa8.6□□□□□ -1.03
SCN8A-201ENST00000354534 AOX1Q06278 1338 aa8.6□□□□□ -1.03
SCN8A-201ENST00000354534 TRIM32Q13049 653 aa8.6□□□□□ -1.03
SCN8A-201ENST00000354534 EXOSC4Q9NPD3 245 aaKnown RBP8.6□□□□□ -1.03
SCN8A-201ENST00000354534 RGL1Q9NZL6 768 aa8.6□□□□□ -1.03
SCN8A-201ENST00000354534 SLC12A6Q9UHW9 1150 aa8.6□□□□□ -1.03
SCN8A-201ENST00000354534 AP3B1O00203 1094 aa8.59□□□□□ -1.03
SCN8A-201ENST00000354534 DHX9Q08211 1270 aaKnown RBP8.59□□□□□ -1.03
SCN8A-201ENST00000354534 MXD4Q14582 209 aaPredicted RBP8.59□□□□□ -1.03
SCN8A-201ENST00000354534 OR8H2Q8N162 312 aa8.59□□□□□ -1.03
SCN8A-201ENST00000354534 LZTS2Q9BRK4 669 aa8.59□□□□□ -1.03
SCN8A-201ENST00000354534 PAGR1Q9BTK6 254 aa8.59□□□□□ -1.03
SCN8A-201ENST00000354534 SCG3Q8WXD2 468 aaKnown RBP8.59□□□□□ -1.03
SCN8A-201ENST00000354534 CALN1Q9BXU9 219 aa8.59□□□□□ -1.03
SCN8A-201ENST00000354534 CLCA2Q9UQC9 943 aa8.59□□□□□ -1.03
SCN8A-201ENST00000354534 BNIP3LO60238 219 aa8.59□□□□□ -1.03
SCN8A-201ENST00000354534 PDE9AO76083 593 aa8.59□□□□□ -1.03
SCN8A-201ENST00000354534 C10orf76Q5T2E6 689 aa8.59□□□□□ -1.03
SCN8A-201ENST00000354534 TMEM154Q6P9G4 183 aa8.59□□□□□ -1.03
SCN8A-201ENST00000354534 RSRC2Q7L4I2 434 aaKnown RBP8.59□□□□□ -1.03
SCN8A-201ENST00000354534 FRMD6Q96NE9 622 aa8.59□□□□□ -1.03
SCN8A-201ENST00000354534 FANCEQ9HB96 536 aa8.59□□□□□ -1.03
SCN8A-201ENST00000354534 ECEL1O95672 775 aa8.59□□□□□ -1.03
SCN8A-201ENST00000354534 ZNF568Q3ZCX4 644 aa8.59□□□□□ -1.03
SCN8A-201ENST00000354534 SIX5Q8N196 739 aa8.59□□□□□ -1.03
SCN8A-201ENST00000354534 GYS1P13807 737 aa8.59□□□□□ -1.03
SCN8A-201ENST00000354534 GINM1Q9NU53 330 aa8.59□□□□□ -1.03
SCN8A-201ENST00000354534 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.59□□□□□ -1.03
SCN8A-201ENST00000354534 SOX6P35712 828 aa8.59□□□□□ -1.03
SCN8A-201ENST00000354534 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.59□□□□□ -1.03
SCN8A-201ENST00000354534 EPN1Q9Y6I3 576 aaPredicted RBP8.59□□□□□ -1.03
SCN8A-201ENST00000354534 ADCY2Q08462 1091 aa8.59□□□□□ -1.03
SCN8A-201ENST00000354534 ULK4Q96C45 1275 aa8.59□□□□□ -1.03
SCN8A-201ENST00000354534 USP28Q96RU2 1077 aa8.59□□□□□ -1.03
SCN8A-201ENST00000354534 KDM2BQ8NHM5 1336 aa8.59□□□□□ -1.03
SCN8A-201ENST00000354534 LDHBP07195 334 aaKnown RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms