RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 FAM83BQ5T0W9 1011 aa8.32□□□□□ -1.08
BRCA1-201ENST00000352993 NUGGCQ68CJ6 796 aa8.32□□□□□ -1.08
BRCA1-201ENST00000352993 CDCA2Q69YH5 1023 aaPredicted RBP8.32□□□□□ -1.08
BRCA1-201ENST00000352993 TMC3Q7Z5M5 1100 aa8.32□□□□□ -1.08
BRCA1-201ENST00000352993 DZIP3Q86Y13 1208 aaKnown RBP8.32□□□□□ -1.08
BRCA1-201ENST00000352993 ANKS1AQ92625 1134 aa8.32□□□□□ -1.08
BRCA1-201ENST00000352993 UPF1Q92900 1129 aaKnown RBP eCLIP8.32□□□□□ -1.08
BRCA1-201ENST00000352993 TBC1D7Q9P0N9 293 aa8.32□□□□□ -1.08
BRCA1-201ENST00000352993 CORO1CQ9ULV4 474 aaPredicted RBP8.32□□□□□ -1.08
BRCA1-201ENST00000352993 TRIM33Q9UPN9 1127 aa8.32□□□□□ -1.08
BRCA1-201ENST00000352993 TCRBV5S4A2TA0A5A2 114 aa8.32□□□□□ -1.08
BRCA1-201ENST00000352993 H0Y3Z8 333 aa8.32□□□□□ -1.08
BRCA1-201ENST00000352993 STXBP3O00186 592 aa8.32□□□□□ -1.08
BRCA1-201ENST00000352993 KRT16P08779 473 aa8.32□□□□□ -1.08
BRCA1-201ENST00000352993 SLC5A1P13866 664 aa8.32□□□□□ -1.08
BRCA1-201ENST00000352993 COPB2P35606 906 aa8.32□□□□□ -1.08
BRCA1-201ENST00000352993 PAPOLAP51003 745 aaKnown RBP8.32□□□□□ -1.08
BRCA1-201ENST00000352993 IFI35P80217 286 aaPredicted RBP8.32□□□□□ -1.08
BRCA1-201ENST00000352993 TRAF1Q13077 416 aa8.32□□□□□ -1.08
BRCA1-201ENST00000352993 RASGRF1Q13972 1273 aa8.32□□□□□ -1.08
BRCA1-201ENST00000352993 IFI16Q16666 785 aaKnown RBP8.32□□□□□ -1.08
BRCA1-201ENST00000352993 TMTC3Q6ZXV5 915 aa8.32□□□□□ -1.08
BRCA1-201ENST00000352993 ACSBG1Q96GR2 724 aa8.32□□□□□ -1.08
BRCA1-201ENST00000352993 NAF1Q96HR8 494 aaKnown RBP8.32□□□□□ -1.08
BRCA1-201ENST00000352993 ZMYND12Q9H0C1 365 aa8.32□□□□□ -1.08
BRCA1-201ENST00000352993 MYH7BA7E2Y1 1941 aa8.31□□□□□ -1.08
BRCA1-201ENST00000352993 SSU72P8A0A1W2PR75 194 aa8.31□□□□□ -1.08
BRCA1-201ENST00000352993 CCDC169A6NNP5 214 aa8.31□□□□□ -1.08
BRCA1-201ENST00000352993 SUN1O94901 812 aa8.31□□□□□ -1.08
BRCA1-201ENST00000352993 ATP4AP20648 1035 aa8.31□□□□□ -1.08
BRCA1-201ENST00000352993 HNRNPH3P31942 346 aaKnown RBP8.31□□□□□ -1.08
BRCA1-201ENST00000352993 GBP1P32455 592 aa8.31□□□□□ -1.08
BRCA1-201ENST00000352993 ITIH4Q14624 930 aa8.31□□□□□ -1.08
BRCA1-201ENST00000352993 TXNRD1Q16881 649 aa8.31□□□□□ -1.08
BRCA1-201ENST00000352993 KSR1Q8IVT5 923 aa8.31□□□□□ -1.08
BRCA1-201ENST00000352993 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.31□□□□□ -1.08
BRCA1-201ENST00000352993 L3MBTL3Q96JM7 780 aaPredicted RBP8.31□□□□□ -1.08
BRCA1-201ENST00000352993 PBKQ96KB5 322 aa8.31□□□□□ -1.08
BRCA1-201ENST00000352993 NUCKS1Q9H1E3 243 aaKnown RBP8.31□□□□□ -1.08
BRCA1-201ENST00000352993 FGFR1OP2Q9NVK5 253 aa8.31□□□□□ -1.08
BRCA1-201ENST00000352993 KBTBD4Q9NVX7 518 aa8.31□□□□□ -1.08
BRCA1-201ENST00000352993 CCNT1O60563 726 aaKnown RBP8.31□□□□□ -1.08
BRCA1-201ENST00000352993 MSH2P43246 934 aa8.31□□□□□ -1.08
BRCA1-201ENST00000352993 EIF3BP55884 814 aaKnown RBP8.31□□□□□ -1.08
BRCA1-201ENST00000352993 ADCY1Q08828 1119 aa8.31□□□□□ -1.08
BRCA1-201ENST00000352993 RIPK1Q13546 671 aa8.31□□□□□ -1.08
BRCA1-201ENST00000352993 SV2BQ7L1I2 683 aa8.31□□□□□ -1.08
BRCA1-201ENST00000352993 ZSCAN29Q8IWY8 852 aaPredicted RBP8.31□□□□□ -1.08
BRCA1-201ENST00000352993 NELFCDQ8IXH7 590 aa8.31□□□□□ -1.08
BRCA1-201ENST00000352993 RPUSD2Q8IZ73 545 aaKnown RBP8.31□□□□□ -1.08
BRCA1-201ENST00000352993 METTL13Q8N6R0 699 aa8.31□□□□□ -1.08
BRCA1-201ENST00000352993 NEK9Q8TD19 979 aa8.31□□□□□ -1.08
BRCA1-201ENST00000352993 BAP1Q92560 729 aa8.31□□□□□ -1.08
BRCA1-201ENST00000352993 PAIP2Q9BPZ3 127 aaKnown RBP8.31□□□□□ -1.08
BRCA1-201ENST00000352993 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.31□□□□□ -1.086e-6■■□□□ 12.9
BRCA1-201ENST00000352993 ARHGEF10LQ9HCE6 1279 aa8.31□□□□□ -1.08
BRCA1-201ENST00000352993 FAM114A2Q9NRY5 505 aa8.31□□□□□ -1.08
BRCA1-201ENST00000352993 SLC5A4Q9NY91 659 aa8.31□□□□□ -1.08
BRCA1-201ENST00000352993 TRMT112Q9UI30 125 aaKnown RBP8.31□□□□□ -1.08
BRCA1-201ENST00000352993 DBR1Q9UK59 544 aaKnown RBP8.31□□□□□ -1.08
BRCA1-201ENST00000352993 FBXO3Q9UK99 471 aa8.31□□□□□ -1.08
BRCA1-201ENST00000352993 G3BP2Q9UN86 482 aaKnown RBP8.31□□□□□ -1.08
BRCA1-201ENST00000352993 SLC12A4Q9UP95 1085 aa8.31□□□□□ -1.08
BRCA1-201ENST00000352993 SNX24Q9Y343 169 aa8.31□□□□□ -1.08
BRCA1-201ENST00000352993 ATP6V0A2Q9Y487 856 aa8.31□□□□□ -1.08
BRCA1-201ENST00000352993 LTN1O94822 1766 aa8.31□□□□□ -1.08
BRCA1-201ENST00000352993 ECM29Q5VYK3 1845 aa8.31□□□□□ -1.08
BRCA1-201ENST00000352993 SPATA31A3Q5VYP0 1347 aa8.31□□□□□ -1.08
BRCA1-201ENST00000352993 MAGEB6P1A0A0J9YX57 407 aa8.31□□□□□ -1.08
BRCA1-201ENST00000352993 TCP11X1B4DZS4 312 aa8.31□□□□□ -1.08
BRCA1-201ENST00000352993 MARCH6O60337 910 aa8.31□□□□□ -1.08
BRCA1-201ENST00000352993 TXKP42681 527 aa8.31□□□□□ -1.08
BRCA1-201ENST00000352993 RANBP1P43487 201 aa8.31□□□□□ -1.08
BRCA1-201ENST00000352993 PDE6CP51160 858 aa8.31□□□□□ -1.08
BRCA1-201ENST00000352993 SESN3P58005 492 aa8.31□□□□□ -1.08
BRCA1-201ENST00000352993 NCALDP61601 193 aa8.31□□□□□ -1.08
BRCA1-201ENST00000352993 SEC23AQ15436 765 aa8.31□□□□□ -1.08
BRCA1-201ENST00000352993 SLC18A3Q16572 532 aa8.31□□□□□ -1.08
BRCA1-201ENST00000352993 GDAP1Q8TB36 358 aa8.31□□□□□ -1.08
BRCA1-201ENST00000352993 TEKT4Q8WW24 435 aa8.31□□□□□ -1.08
BRCA1-201ENST00000352993 TNFRSF25Q93038 417 aa8.31□□□□□ -1.08
BRCA1-201ENST00000352993 TRIM7Q9C029 511 aa8.31□□□□□ -1.08
BRCA1-201ENST00000352993 TRIM4Q9C037 500 aa8.31□□□□□ -1.08
BRCA1-201ENST00000352993 MTFR1LQ9H019 292 aa8.31□□□□□ -1.08
BRCA1-201ENST00000352993 PNMA3Q9UL41 463 aa8.31□□□□□ -1.08
BRCA1-201ENST00000352993 PAPPAQ13219 1627 aa8.31□□□□□ -1.08
BRCA1-201ENST00000352993 FAM205AQ6ZU69 1335 aa8.3□□□□□ -1.08
BRCA1-201ENST00000352993 TSPY2A6NKD2 308 aa8.3□□□□□ -1.08
BRCA1-201ENST00000352993 CYP27B1O15528 508 aa8.3□□□□□ -1.08
BRCA1-201ENST00000352993 ASAP2O43150 1006 aa8.3□□□□□ -1.08
BRCA1-201ENST00000352993 CLSTN1O94985 981 aa8.3□□□□□ -1.08
BRCA1-201ENST00000352993 LCA5LO95447 670 aa8.3□□□□□ -1.08
BRCA1-201ENST00000352993 FGGP02679 453 aa8.3□□□□□ -1.08
BRCA1-201ENST00000352993 MYL1P05976 194 aa8.3□□□□□ -1.08
BRCA1-201ENST00000352993 PAEPP09466 180 aa8.3□□□□□ -1.08
BRCA1-201ENST00000352993 PPP1R2P41236 205 aa8.3□□□□□ -1.08
BRCA1-201ENST00000352993 PMS2P54278 862 aa8.3□□□□□ -1.08
BRCA1-201ENST00000352993 RAD23BP54727 409 aa8.3□□□□□ -1.08
BRCA1-201ENST00000352993 COPS2P61201 443 aa8.3□□□□□ -1.08
BRCA1-201ENST00000352993 BLMHQ13867 455 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms