RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 FBXL5Q9UKA1 691 aa20.41■□□□□ 0.86
SCARF1-202ENST00000348987 CCNT1O60563 726 aaKnown RBP20.4■□□□□ 0.86
SCARF1-202ENST00000348987 PAEPP09466 180 aa20.4■□□□□ 0.86
SCARF1-202ENST00000348987 MYBP10242 640 aa20.4■□□□□ 0.86
SCARF1-202ENST00000348987 GHRP10912 638 aa20.4■□□□□ 0.86
SCARF1-202ENST00000348987 KLRC1P26715 233 aa20.4■□□□□ 0.86
SCARF1-202ENST00000348987 MEI1Q5TIA1 1274 aa20.4■□□□□ 0.86
SCARF1-202ENST00000348987 HGSNATQ68CP4 663 aa20.4■□□□□ 0.86
SCARF1-202ENST00000348987 CACNA2D4Q7Z3S7 1137 aa20.4■□□□□ 0.86
SCARF1-202ENST00000348987 P3H4Q92791 437 aa20.4■□□□□ 0.86
SCARF1-202ENST00000348987 LRRC45Q96CN5 670 aa20.4■□□□□ 0.86
SCARF1-202ENST00000348987 CCSER1Q9C0I3 900 aa20.4■□□□□ 0.86
SCARF1-202ENST00000348987 SEMA6BQ9H3T3 888 aa20.4■□□□□ 0.86
SCARF1-202ENST00000348987 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.4■□□□□ 0.86
SCARF1-202ENST00000348987 CDC25CP30307 473 aa20.4■□□□□ 0.86
SCARF1-202ENST00000348987 SARNPP82979 210 aaKnown RBP20.4■□□□□ 0.86
SCARF1-202ENST00000348987 TAX1BP1Q86VP1 789 aa20.4■□□□□ 0.86
SCARF1-202ENST00000348987 ARMC2Q8NEN0 867 aa20.4■□□□□ 0.86
SCARF1-202ENST00000348987 BTAF1O14981 1849 aa20.4■□□□□ 0.86
SCARF1-202ENST00000348987 CCT8L1PA6NM43 557 aa20.4■□□□□ 0.86
SCARF1-202ENST00000348987 ANP32DO95626 131 aa20.4■□□□□ 0.86
SCARF1-202ENST00000348987 MYL1P05976 194 aa20.4■□□□□ 0.86
SCARF1-202ENST00000348987 PEX19P40855 299 aa20.4■□□□□ 0.86
SCARF1-202ENST00000348987 NAPAP54920 295 aa20.4■□□□□ 0.86
SCARF1-202ENST00000348987 INHBEP58166 350 aa20.4■□□□□ 0.86
SCARF1-202ENST00000348987 ASIC1P78348 528 aa20.4■□□□□ 0.86
SCARF1-202ENST00000348987 KIF9Q9HAQ2 790 aa20.4■□□□□ 0.86
SCARF1-202ENST00000348987 NLRC4Q9NPP4 1024 aa20.4■□□□□ 0.86
SCARF1-202ENST00000348987 EME2A4GXA9 379 aaPredicted RBP20.39■□□□□ 0.85
SCARF1-202ENST00000348987 TECP42680 631 aa20.39■□□□□ 0.85
SCARF1-202ENST00000348987 GNAQP50148 359 aa20.39■□□□□ 0.85
SCARF1-202ENST00000348987 TRAPPC3LQ5T215 181 aa20.39■□□□□ 0.85
SCARF1-202ENST00000348987 RC3H1Q5TC82 1133 aaKnown RBP20.39■□□□□ 0.85
SCARF1-202ENST00000348987 CABP7Q86V35 215 aa20.39■□□□□ 0.85
SCARF1-202ENST00000348987 DAGLBQ8NCG7 672 aa20.39■□□□□ 0.85
SCARF1-202ENST00000348987 WDR66Q8TBY9 1149 aa20.39■□□□□ 0.85
SCARF1-202ENST00000348987 LMBR1Q8WVP7 490 aa20.39■□□□□ 0.85
SCARF1-202ENST00000348987 TRIM9Q9C026 710 aa20.39■□□□□ 0.85
SCARF1-202ENST00000348987 PDXDC1Q6P996 788 aa20.39■□□□□ 0.85
SCARF1-202ENST00000348987 TBC1D1Q86TI0 1168 aaPredicted RBP20.39■□□□□ 0.85
SCARF1-202ENST00000348987 CCDC63Q8NA47 563 aa20.39■□□□□ 0.85
SCARF1-202ENST00000348987 NAB2Q15742 525 aa20.38■□□□□ 0.85
SCARF1-202ENST00000348987 AGBL2Q5U5Z8 902 aa20.38■□□□□ 0.85
SCARF1-202ENST00000348987 BZW1Q7L1Q6 419 aaKnown RBP20.38■□□□□ 0.85
SCARF1-202ENST00000348987 CCDC84Q86UT8 332 aaPredicted RBP20.38■□□□□ 0.85
SCARF1-202ENST00000348987 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.38■□□□□ 0.85
SCARF1-202ENST00000348987 CHMP6Q96FZ7 201 aa20.38■□□□□ 0.85
SCARF1-202ENST00000348987 RTFDC1Q9BY42 306 aaPredicted RBP20.38■□□□□ 0.85
SCARF1-202ENST00000348987 UBA5Q9GZZ9 404 aa20.38■□□□□ 0.85
SCARF1-202ENST00000348987 ZMYND12Q9H0C1 365 aa20.38■□□□□ 0.85
SCARF1-202ENST00000348987 SLC39A2Q9NP94 309 aa20.38■□□□□ 0.85
SCARF1-202ENST00000348987 TMEM59LQ9UK28 342 aa20.38■□□□□ 0.85
SCARF1-202ENST00000348987 SMCO2A6NFE2 343 aa20.38■□□□□ 0.85
SCARF1-202ENST00000348987 CUL1Q13616 776 aa20.38■□□□□ 0.85
SCARF1-202ENST00000348987 KRT71Q3SY84 523 aa20.38■□□□□ 0.85
SCARF1-202ENST00000348987 KIAA0895Q8NCT3 520 aa20.38■□□□□ 0.85
SCARF1-202ENST00000348987 CCDC197Q8NCU1 140 aa20.38■□□□□ 0.85
SCARF1-202ENST00000348987 C15orf41Q9Y2V0 281 aa20.38■□□□□ 0.85
SCARF1-202ENST00000348987 ROBO3Q96MS0 1386 aa20.38■□□□□ 0.85
SCARF1-202ENST00000348987 SSU72P8A0A1W2PR75 194 aa20.37■□□□□ 0.85
SCARF1-202ENST00000348987 KCNK3O14649 394 aa20.37■□□□□ 0.85
SCARF1-202ENST00000348987 BAG3O95817 575 aa20.37■□□□□ 0.85
SCARF1-202ENST00000348987 CDK8P49336 464 aa20.37■□□□□ 0.85
SCARF1-202ENST00000348987 PTPROQ16827 1216 aa20.37■□□□□ 0.85
SCARF1-202ENST00000348987 MEX3CQ5U5Q3 659 aaKnown RBP20.37■□□□□ 0.85
SCARF1-202ENST00000348987 CCDC47Q96A33 483 aaKnown RBP20.37■□□□□ 0.85
SCARF1-202ENST00000348987 EYA3Q99504 573 aa20.37■□□□□ 0.85
SCARF1-202ENST00000348987 MMTAG2Q9BU76 263 aaKnown RBP20.37■□□□□ 0.85
SCARF1-202ENST00000348987 AP1M1Q9BXS5 423 aa20.37■□□□□ 0.85
SCARF1-202ENST00000348987 TMEM260Q9NX78 707 aa20.37■□□□□ 0.85
SCARF1-202ENST00000348987 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.37■□□□□ 0.85
SCARF1-202ENST00000348987 CTNND1O60716 968 aaKnown RBP20.37■□□□□ 0.85
SCARF1-202ENST00000348987 OR52Z1P0C646 297 aa20.37■□□□□ 0.85
SCARF1-202ENST00000348987 PDE6BP35913 854 aa20.37■□□□□ 0.85
SCARF1-202ENST00000348987 BTDP43251 543 aa20.37■□□□□ 0.85
SCARF1-202ENST00000348987 PIGSQ96S52 555 aa20.37■□□□□ 0.85
SCARF1-202ENST00000348987 PACSIN1Q9BY11 444 aa20.37■□□□□ 0.85
SCARF1-202ENST00000348987 BATF3Q9NR55 127 aa20.37■□□□□ 0.85
SCARF1-202ENST00000348987 TCP11L1Q9NUJ3 509 aa20.37■□□□□ 0.85
SCARF1-202ENST00000348987 BIN2Q9UBW5 565 aaPredicted RBP20.37■□□□□ 0.85
SCARF1-202ENST00000348987 TRPC6Q9Y210 931 aa20.37■□□□□ 0.85
SCARF1-202ENST00000348987 CCDC88AQ3V6T2 1871 aa20.36■□□□□ 0.85
SCARF1-202ENST00000348987 PPP4CP60510 307 aa20.36■□□□□ 0.85
SCARF1-202ENST00000348987 CEP95Q96GE4 821 aa20.36■□□□□ 0.85
SCARF1-202ENST00000348987 PSMD1Q99460 953 aa20.36■□□□□ 0.85
SCARF1-202ENST00000348987 GOLPH3Q9H4A6 298 aa20.36■□□□□ 0.85
SCARF1-202ENST00000348987 PCDHGC5Q9Y5F6 944 aa20.36■□□□□ 0.85
SCARF1-202ENST00000348987 RBAK-RBAKDNI3L0D1 243 aa20.36■□□□□ 0.85
SCARF1-202ENST00000348987 TLR2O60603 784 aa20.36■□□□□ 0.85
SCARF1-202ENST00000348987 MAN2A1Q16706 1144 aa20.36■□□□□ 0.85
SCARF1-202ENST00000348987 CRELD2Q6UXH1 353 aaPredicted RBP20.36■□□□□ 0.85
SCARF1-202ENST00000348987 CNBD1Q8NA66 436 aa20.36■□□□□ 0.85
SCARF1-202ENST00000348987 TBCKQ8TEA7 893 aa20.36■□□□□ 0.85
SCARF1-202ENST00000348987 XPO6Q96QU8 1125 aaKnown RBP20.36■□□□□ 0.85
SCARF1-202ENST00000348987 SPAG5Q96R06 1193 aa20.36■□□□□ 0.85
SCARF1-202ENST00000348987 PANK4Q9NVE7 773 aa20.36■□□□□ 0.85
SCARF1-202ENST00000348987 SWAP70Q9UH65 585 aa20.36■□□□□ 0.85
SCARF1-202ENST00000348987 SNED1Q8TER0 1413 aa20.36■□□□□ 0.85
SCARF1-202ENST00000348987 PRPHP41219 470 aa20.35■□□□□ 0.85
SCARF1-202ENST00000348987 ENOX2Q16206 610 aaKnown RBP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms