RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 KRT8P05787 483 aa11.96□□□□□ -0.49
SMARCE1-202ENST00000348513 GSTA2P09210 222 aa11.96□□□□□ -0.49
SMARCE1-202ENST00000348513 SERPINB4P48594 390 aa11.96□□□□□ -0.49
SMARCE1-202ENST00000348513 PABPC4Q13310 644 aaKnown RBP eCLIP11.96□□□□□ -0.494e-8■□□□□ 9.6
SMARCE1-202ENST00000348513 TLK2Q86UE8 772 aa11.96□□□□□ -0.49
SMARCE1-202ENST00000348513 TDRD7Q8NHU6 1098 aaKnown RBP11.96□□□□□ -0.49
SMARCE1-202ENST00000348513 HINFPQ9BQA5 517 aa11.96□□□□□ -0.49
SMARCE1-202ENST00000348513 HAUS8Q9BT25 410 aa11.96□□□□□ -0.49
SMARCE1-202ENST00000348513 ZBED2Q9BTP6 218 aa11.96□□□□□ -0.49
SMARCE1-202ENST00000348513 ARMCX3Q9UH62 379 aaPredicted RBP11.96□□□□□ -0.49
SMARCE1-202ENST00000348513 SOS2Q07890 1332 aaPredicted RBP11.96□□□□□ -0.49
SMARCE1-202ENST00000348513 CFAP74Q9C0B2 1584 aa11.96□□□□□ -0.5
SMARCE1-202ENST00000348513 PALM3A6NDB9 673 aaPredicted RBP11.96□□□□□ -0.5
SMARCE1-202ENST00000348513 ATP5HO75947 161 aa11.96□□□□□ -0.5
SMARCE1-202ENST00000348513 CAPN1P07384 714 aa11.96□□□□□ -0.5
SMARCE1-202ENST00000348513 ADAM9Q13443 819 aa11.96□□□□□ -0.5
SMARCE1-202ENST00000348513 CAPN12Q6ZSI9 719 aa11.96□□□□□ -0.5
SMARCE1-202ENST00000348513 COA7Q96BR5 231 aa11.96□□□□□ -0.5
SMARCE1-202ENST00000348513 FANCLQ9NW38 375 aa11.96□□□□□ -0.5
SMARCE1-202ENST00000348513 RABL2AQ9UBK7 228 aaPredicted RBP11.96□□□□□ -0.5
SMARCE1-202ENST00000348513 CAPN9O14815 690 aa11.96□□□□□ -0.5
SMARCE1-202ENST00000348513 LCA5LO95447 670 aa11.96□□□□□ -0.5
SMARCE1-202ENST00000348513 CYP21A2P08686 494 aa11.96□□□□□ -0.5
SMARCE1-202ENST00000348513 ENOX1Q8TC92 643 aaKnown RBP11.96□□□□□ -0.5
SMARCE1-202ENST00000348513 CATSPER2Q96P56 530 aa11.96□□□□□ -0.5
SMARCE1-202ENST00000348513 PIGSQ96S52 555 aa11.96□□□□□ -0.5
SMARCE1-202ENST00000348513 C1orf112Q9NSG2 853 aa11.96□□□□□ -0.5
SMARCE1-202ENST00000348513 USP6P35125 1406 aa11.95□□□□□ -0.5
SMARCE1-202ENST00000348513 SEMA3EO15041 775 aa11.95□□□□□ -0.5
SMARCE1-202ENST00000348513 PRR36Q9H6K5 1346 aa11.95□□□□□ -0.5
SMARCE1-202ENST00000348513 MEIS1O00470 390 aa11.95□□□□□ -0.5
SMARCE1-202ENST00000348513 KCNK3O14649 394 aa11.95□□□□□ -0.5
SMARCE1-202ENST00000348513 TTLL1O95922 423 aa11.95□□□□□ -0.5
SMARCE1-202ENST00000348513 FLOT2Q14254 428 aa11.95□□□□□ -0.5
SMARCE1-202ENST00000348513 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.95□□□□□ -0.5
SMARCE1-202ENST00000348513 POMGNT1Q8WZA1 660 aa11.95□□□□□ -0.5
SMARCE1-202ENST00000348513 FAM193BQ96PV7 902 aaPredicted RBP11.95□□□□□ -0.5
SMARCE1-202ENST00000348513 ADPGKQ9BRR6 497 aa11.95□□□□□ -0.5
SMARCE1-202ENST00000348513 ZNF577Q9BSK1 485 aa11.95□□□□□ -0.5
SMARCE1-202ENST00000348513 DDX28Q9NUL7 540 aaKnown RBP11.95□□□□□ -0.5
SMARCE1-202ENST00000348513 INTS9Q9NV88 658 aaKnown RBP11.95□□□□□ -0.5
SMARCE1-202ENST00000348513 AMFRQ9UKV5 643 aa11.95□□□□□ -0.5
SMARCE1-202ENST00000348513 ERVK-7P63135 1459 aa11.95□□□□□ -0.5
SMARCE1-202ENST00000348513 STAM2O75886 525 aa11.95□□□□□ -0.5
SMARCE1-202ENST00000348513 KRT15P19012 456 aa11.95□□□□□ -0.5
SMARCE1-202ENST00000348513 GGCXP38435 758 aa11.95□□□□□ -0.5
SMARCE1-202ENST00000348513 ST13P50502 369 aaKnown RBP11.95□□□□□ -0.5
SMARCE1-202ENST00000348513 KCTD2Q14681 263 aa11.95□□□□□ -0.5
SMARCE1-202ENST00000348513 SMYD4Q8IYR2 804 aaPredicted RBP11.95□□□□□ -0.5
SMARCE1-202ENST00000348513 A0A087WWV3 80 aa11.95□□□□□ -0.5
SMARCE1-202ENST00000348513 KLHL33A6NCF5 533 aa11.95□□□□□ -0.5
SMARCE1-202ENST00000348513 TMEM191BP0C7N4 346 aa11.95□□□□□ -0.5
SMARCE1-202ENST00000348513 ATF7P17544 494 aaPredicted RBP11.95□□□□□ -0.5
SMARCE1-202ENST00000348513 PIK3CAP42336 1068 aa11.95□□□□□ -0.5
SMARCE1-202ENST00000348513 RCN2Q14257 317 aa11.95□□□□□ -0.5
SMARCE1-202ENST00000348513 LRRC41Q15345 812 aa11.95□□□□□ -0.5
SMARCE1-202ENST00000348513 RSPH3Q86UC2 560 aa11.95□□□□□ -0.5
SMARCE1-202ENST00000348513 AMNQ9BXJ7 453 aa11.95□□□□□ -0.5
SMARCE1-202ENST00000348513 ARAP3Q8WWN8 1544 aa11.95□□□□□ -0.5
SMARCE1-202ENST00000348513 SMAPO00193 183 aa11.94□□□□□ -0.5
SMARCE1-202ENST00000348513 MSL3P1P0C860 447 aa11.94□□□□□ -0.5
SMARCE1-202ENST00000348513 ADD2P35612 726 aa11.94□□□□□ -0.5
SMARCE1-202ENST00000348513 YWHAEP62258 255 aaKnown RBP11.94□□□□□ -0.5
SMARCE1-202ENST00000348513 ITKQ08881 620 aa11.94□□□□□ -0.5
SMARCE1-202ENST00000348513 IQCB1Q15051 598 aa11.94□□□□□ -0.5
SMARCE1-202ENST00000348513 ODR4Q5SWX8 454 aa11.94□□□□□ -0.5
SMARCE1-202ENST00000348513 SUSD4Q5VX71 490 aa11.94□□□□□ -0.5
SMARCE1-202ENST00000348513 USP17L2Q6R6M4 530 aa11.94□□□□□ -0.5
SMARCE1-202ENST00000348513 LRRC31Q6UY01 552 aa11.94□□□□□ -0.5
SMARCE1-202ENST00000348513 SSH2Q76I76 1423 aa11.94□□□□□ -0.5
SMARCE1-202ENST00000348513 SEPT12Q8IYM1 358 aa11.94□□□□□ -0.5
SMARCE1-202ENST00000348513 RSAD2Q8WXG1 361 aa11.94□□□□□ -0.5
SMARCE1-202ENST00000348513 INTUQ9ULD6 942 aa11.94□□□□□ -0.5
SMARCE1-202ENST00000348513 AKT3Q9Y243 479 aa11.94□□□□□ -0.5
SMARCE1-202ENST00000348513 CARD8Q9Y2G2 431 aa11.94□□□□□ -0.5
SMARCE1-202ENST00000348513 UBN2Q6ZU65 1347 aa11.94□□□□□ -0.5
SMARCE1-202ENST00000348513 CMA1P23946 247 aa11.94□□□□□ -0.5
SMARCE1-202ENST00000348513 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.94□□□□□ -0.5
SMARCE1-202ENST00000348513 MAP4K1Q92918 833 aa11.94□□□□□ -0.5
SMARCE1-202ENST00000348513 CCDC51Q96ER9 411 aa11.94□□□□□ -0.5
SMARCE1-202ENST00000348513 DIABLOQ9NR28 239 aa11.94□□□□□ -0.5
SMARCE1-202ENST00000348513 ATP11BQ9Y2G3 1177 aa11.94□□□□□ -0.5
SMARCE1-202ENST00000348513 EIF3HO15372 352 aaKnown RBP eCLIP11.94□□□□□ -0.5
SMARCE1-202ENST00000348513 ROR2Q01974 943 aaKnown RBP11.94□□□□□ -0.5
SMARCE1-202ENST00000348513 KAZNQ674X7 775 aa11.94□□□□□ -0.5
SMARCE1-202ENST00000348513 NLRP9Q7RTR0 991 aa11.94□□□□□ -0.5
SMARCE1-202ENST00000348513 GRAMD1CQ8IYS0 662 aa11.94□□□□□ -0.5
SMARCE1-202ENST00000348513 ERBB3P21860 1342 aa11.94□□□□□ -0.5
SMARCE1-202ENST00000348513 USP17L3A6NCW0 530 aa11.94□□□□□ -0.5
SMARCE1-202ENST00000348513 USP17L4A6NCW7 530 aa11.94□□□□□ -0.5
SMARCE1-202ENST00000348513 GTPBP6O43824 516 aaPredicted RBP11.94□□□□□ -0.5
SMARCE1-202ENST00000348513 PDE6CP51160 858 aa11.94□□□□□ -0.5
SMARCE1-202ENST00000348513 GOLGA8FQ08AF8 430 aa11.94□□□□□ -0.5
SMARCE1-202ENST00000348513 GOLGA8DPQ0D2H9 430 aa11.94□□□□□ -0.5
SMARCE1-202ENST00000348513 ZNF772Q68DY9 489 aaPredicted RBP11.94□□□□□ -0.5
SMARCE1-202ENST00000348513 CC2D2BQ6DHV5 1058 aa11.94□□□□□ -0.5
SMARCE1-202ENST00000348513 USP17L1Q7RTZ2 530 aa11.94□□□□□ -0.5
SMARCE1-202ENST00000348513 PARD3BQ8TEW8 1205 aa11.94□□□□□ -0.5
SMARCE1-202ENST00000348513 NLRP7Q8WX94 980 aa11.94□□□□□ -0.5
SMARCE1-202ENST00000348513 CCDC138Q96M89 665 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms