RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 WDR59Q6PJI9 974 aa15.61■□□□□ 0.09
CDK5RAP1-202ENST00000346416 C1orf186Q6ZWK4 172 aa15.61■□□□□ 0.09
CDK5RAP1-202ENST00000346416 EPM2AIP1Q7L775 607 aaPredicted RBP15.61■□□□□ 0.09
CDK5RAP1-202ENST00000346416 ACRBPQ8NEB7 543 aa15.61■□□□□ 0.09
CDK5RAP1-202ENST00000346416 ATRIPQ8WXE1 791 aa15.61■□□□□ 0.09
CDK5RAP1-202ENST00000346416 C12orf42Q96LP6 360 aa15.61■□□□□ 0.09
CDK5RAP1-202ENST00000346416 NACC1Q96RE7 527 aa15.61■□□□□ 0.09
CDK5RAP1-202ENST00000346416 WDR24Q96S15 920 aa15.61■□□□□ 0.09
CDK5RAP1-202ENST00000346416 BCAS3Q9H6U6 928 aa15.61■□□□□ 0.09
CDK5RAP1-202ENST00000346416 SIK3Q9Y2K2 1263 aa15.61■□□□□ 0.09
CDK5RAP1-202ENST00000346416 RIPK3Q9Y572 518 aa15.61■□□□□ 0.09
CDK5RAP1-202ENST00000346416 UBIAD1Q9Y5Z9 338 aa15.61■□□□□ 0.09
CDK5RAP1-202ENST00000346416 SSC5DA1L4H1 1573 aa15.61■□□□□ 0.09
CDK5RAP1-202ENST00000346416 C19orf81C9J6K1 198 aa15.61■□□□□ 0.09
CDK5RAP1-202ENST00000346416 MYBP10242 640 aa15.61■□□□□ 0.09
CDK5RAP1-202ENST00000346416 FRMPD4Q14CM0 1322 aa15.61■□□□□ 0.09
CDK5RAP1-202ENST00000346416 EDRF1Q3B7T1 1238 aa15.61■□□□□ 0.09
CDK5RAP1-202ENST00000346416 NSMFQ6X4W1 530 aa15.61■□□□□ 0.09
CDK5RAP1-202ENST00000346416 PPP4R3CPQ6ZMV5 832 aa15.61■□□□□ 0.09
CDK5RAP1-202ENST00000346416 RNF207Q6ZRF8 634 aa15.61■□□□□ 0.09
CDK5RAP1-202ENST00000346416 LXNQ9BS40 222 aa15.61■□□□□ 0.09
CDK5RAP1-202ENST00000346416 ZNF215Q9UL58 517 aaPredicted RBP15.61■□□□□ 0.09
CDK5RAP1-202ENST00000346416 PHIPQ8WWQ0 1821 aa15.6■□□□□ 0.09
CDK5RAP1-202ENST00000346416 A0A1W2PQJ5 194 aa15.6■□□□□ 0.09
CDK5RAP1-202ENST00000346416 SFI1A8K8P3 1242 aa15.6■□□□□ 0.09
CDK5RAP1-202ENST00000346416 DHX15O43143 795 aaKnown RBP15.6■□□□□ 0.09
CDK5RAP1-202ENST00000346416 GNA14O95837 355 aa15.6■□□□□ 0.09
CDK5RAP1-202ENST00000346416 HOXD13P35453 343 aa15.6■□□□□ 0.09
CDK5RAP1-202ENST00000346416 ADAM9Q13443 819 aa15.6■□□□□ 0.09
CDK5RAP1-202ENST00000346416 MTMR1Q13613 665 aa15.6■□□□□ 0.09
CDK5RAP1-202ENST00000346416 PRKG1Q13976 671 aa15.6■□□□□ 0.09
CDK5RAP1-202ENST00000346416 PGM5Q15124 567 aa15.6■□□□□ 0.09
CDK5RAP1-202ENST00000346416 MEA1Q16626 185 aa15.6■□□□□ 0.09
CDK5RAP1-202ENST00000346416 KNOP1Q1ED39 458 aaKnown RBP15.6■□□□□ 0.09
CDK5RAP1-202ENST00000346416 SUPT20HL1Q3ZLR7 823 aa15.6■□□□□ 0.09
CDK5RAP1-202ENST00000346416 ZNF710Q8N1W2 664 aa15.6■□□□□ 0.09
CDK5RAP1-202ENST00000346416 BANK1Q8NDB2 785 aa15.6■□□□□ 0.09
CDK5RAP1-202ENST00000346416 RMDN3Q96TC7 470 aa15.6■□□□□ 0.09
CDK5RAP1-202ENST00000346416 IRX2Q9BZI1 471 aaPredicted RBP15.6■□□□□ 0.09
CDK5RAP1-202ENST00000346416 AGO4Q9HCK5 861 aaKnown RBP15.6■□□□□ 0.09
CDK5RAP1-202ENST00000346416 JADE2Q9NQC1 790 aa15.6■□□□□ 0.09
CDK5RAP1-202ENST00000346416 RNF146Q9NTX7 359 aa15.6■□□□□ 0.09
CDK5RAP1-202ENST00000346416 EPN1Q9Y6I3 576 aaPredicted RBP15.6■□□□□ 0.09
CDK5RAP1-202ENST00000346416 RLFQ13129 1914 aa15.6■□□□□ 0.09
CDK5RAP1-202ENST00000346416 PRPF6O94906 941 aaKnown RBP15.59■□□□□ 0.09
CDK5RAP1-202ENST00000346416 SLU7O95391 586 aaKnown RBP15.59■□□□□ 0.09
CDK5RAP1-202ENST00000346416 ITGB3BPQ13352 177 aaPredicted RBP15.59■□□□□ 0.09
CDK5RAP1-202ENST00000346416 MIER3Q7Z3K6 550 aa15.59■□□□□ 0.09
CDK5RAP1-202ENST00000346416 ZC3H3Q8IXZ2 948 aaKnown RBP15.59■□□□□ 0.09
CDK5RAP1-202ENST00000346416 ZNF397Q8NF99 534 aaPredicted RBP15.59■□□□□ 0.09
CDK5RAP1-202ENST00000346416 REPS2Q8NFH8 660 aa15.59■□□□□ 0.09
CDK5RAP1-202ENST00000346416 IQCDQ96DY2 449 aa15.59■□□□□ 0.09
CDK5RAP1-202ENST00000346416 PURBQ96QR8 312 aaKnown RBP15.59■□□□□ 0.09
CDK5RAP1-202ENST00000346416 SPON1Q9HCB6 807 aa15.59■□□□□ 0.09
CDK5RAP1-202ENST00000346416 OLFML3Q9NRN5 406 aa15.59■□□□□ 0.09
CDK5RAP1-202ENST00000346416 FAM207AQ9NSI2 230 aaPredicted RBP15.59■□□□□ 0.09
CDK5RAP1-202ENST00000346416 TRAF3IP3Q9Y228 551 aa15.59■□□□□ 0.09
CDK5RAP1-202ENST00000346416 SBF1O95248 1867 aa15.59■□□□□ 0.09
CDK5RAP1-202ENST00000346416 COL11A1P12107 1806 aaPredicted RBP15.59■□□□□ 0.09
CDK5RAP1-202ENST00000346416 DDNO94850 711 aaPredicted RBP15.59■□□□□ 0.09
CDK5RAP1-202ENST00000346416 NDUFA10O95299 355 aa15.59■□□□□ 0.09
CDK5RAP1-202ENST00000346416 MYCLP12524 364 aaPredicted RBP15.59■□□□□ 0.09
CDK5RAP1-202ENST00000346416 GAP43P17677 238 aa15.59■□□□□ 0.09
CDK5RAP1-202ENST00000346416 NR2F2P24468 414 aa15.59■□□□□ 0.09
CDK5RAP1-202ENST00000346416 DSG3P32926 999 aa15.59■□□□□ 0.09
CDK5RAP1-202ENST00000346416 MARSP56192 900 aaKnown RBP15.59■□□□□ 0.09
CDK5RAP1-202ENST00000346416 COG2Q14746 738 aa15.59■□□□□ 0.09
CDK5RAP1-202ENST00000346416 NAA30Q147X3 362 aaPredicted RBP15.59■□□□□ 0.09
CDK5RAP1-202ENST00000346416 SNRNP48Q6IEG0 339 aaKnown RBP15.59■□□□□ 0.09
CDK5RAP1-202ENST00000346416 NEK9Q8TD19 979 aa15.59■□□□□ 0.09
CDK5RAP1-202ENST00000346416 PDCD2LQ9BRP1 358 aa15.59■□□□□ 0.09
CDK5RAP1-202ENST00000346416 MMRN2Q9H8L6 949 aa15.59■□□□□ 0.09
CDK5RAP1-202ENST00000346416 PXMP2Q9NR77 195 aa15.59■□□□□ 0.09
CDK5RAP1-202ENST00000346416 ZNHIT6Q9NWK9 470 aaKnown RBP15.59■□□□□ 0.09
CDK5RAP1-202ENST00000346416 ADAMTS5Q9UNA0 930 aa15.59■□□□□ 0.09
CDK5RAP1-202ENST00000346416 CETN3O15182 167 aa15.58■□□□□ 0.08
CDK5RAP1-202ENST00000346416 EPHB6O15197 1021 aa15.58■□□□□ 0.08
CDK5RAP1-202ENST00000346416 URI1O94763 535 aaPredicted RBP15.58■□□□□ 0.08
CDK5RAP1-202ENST00000346416 FAM13AO94988 1023 aa15.58■□□□□ 0.08
CDK5RAP1-202ENST00000346416 GCNT3O95395 438 aa15.58■□□□□ 0.08
CDK5RAP1-202ENST00000346416 CASQ1P31415 396 aa15.58■□□□□ 0.08
CDK5RAP1-202ENST00000346416 NCBP1Q09161 790 aaKnown RBP15.58■□□□□ 0.08
CDK5RAP1-202ENST00000346416 BAATQ14032 418 aaPredicted RBP15.58■□□□□ 0.08
CDK5RAP1-202ENST00000346416 BMT2Q1RMZ1 405 aa15.58■□□□□ 0.08
CDK5RAP1-202ENST00000346416 NOL9Q5SY16 702 aaKnown RBP15.58■□□□□ 0.08
CDK5RAP1-202ENST00000346416 TRIM59Q8IWR1 403 aa15.58■□□□□ 0.08
CDK5RAP1-202ENST00000346416 MYCT1Q8N699 235 aa15.58■□□□□ 0.08
CDK5RAP1-202ENST00000346416 CCDC155Q8N6L0 562 aa15.58■□□□□ 0.08
CDK5RAP1-202ENST00000346416 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.58■□□□□ 0.08
CDK5RAP1-202ENST00000346416 FHDC1Q9C0D6 1143 aaPredicted RBP15.58■□□□□ 0.08
CDK5RAP1-202ENST00000346416 ZNF214Q9UL59 606 aaPredicted RBP15.58■□□□□ 0.08
CDK5RAP1-202ENST00000346416 AFG3L2Q9Y4W6 797 aa15.58■□□□□ 0.08
CDK5RAP1-202ENST00000346416 PDXKO00764 312 aa15.58■□□□□ 0.08
CDK5RAP1-202ENST00000346416 OAZ1P54368 228 aa15.58■□□□□ 0.08
CDK5RAP1-202ENST00000346416 ARHGAP29Q52LW3 1261 aa15.58■□□□□ 0.08
CDK5RAP1-202ENST00000346416 ARHGEF16Q5VV41 709 aa15.58■□□□□ 0.08
CDK5RAP1-202ENST00000346416 ERO1AQ96HE7 468 aa15.58■□□□□ 0.08
CDK5RAP1-202ENST00000346416 PARVGQ9HBI0 331 aa15.58■□□□□ 0.08
CDK5RAP1-202ENST00000346416 TMOD4Q9NZQ9 345 aa15.58■□□□□ 0.08
CDK5RAP1-202ENST00000346416 KCND2Q9NZV8 630 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms