RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 ARMCX5Q6P1M9 558 aa10.31□□□□□ -0.76
ATG4A-202ENST00000345734 NYAP1Q6ZVC0 841 aa10.31□□□□□ -0.76
ATG4A-202ENST00000345734 SV2BQ7L1I2 683 aa10.31□□□□□ -0.76
ATG4A-202ENST00000345734 GPC2Q8N158 579 aa10.31□□□□□ -0.76
ATG4A-202ENST00000345734 RAD54LQ92698 747 aa10.31□□□□□ -0.76
ATG4A-202ENST00000345734 GTPBP4Q9BZE4 634 aaKnown RBP10.31□□□□□ -0.76
ATG4A-202ENST00000345734 KIAA1683Q9H0B3 1180 aa10.31□□□□□ -0.76
ATG4A-202ENST00000345734 GGA3Q9NZ52 723 aa10.31□□□□□ -0.76
ATG4A-202ENST00000345734 IMPACTQ9P2X3 320 aa10.31□□□□□ -0.76
ATG4A-202ENST00000345734 RWDD2AQ9UIY3 292 aa10.31□□□□□ -0.76
ATG4A-202ENST00000345734 ZNF536O15090 1300 aa10.31□□□□□ -0.76
ATG4A-202ENST00000345734 TRIM49BA6NDI0 452 aa10.31□□□□□ -0.76
ATG4A-202ENST00000345734 WDR46O15213 610 aaKnown RBP10.31□□□□□ -0.76
ATG4A-202ENST00000345734 PRMT3O60678 531 aa10.31□□□□□ -0.76
ATG4A-202ENST00000345734 CIITAP33076 1130 aa10.31□□□□□ -0.76
ATG4A-202ENST00000345734 SERPINB4P48594 390 aa10.31□□□□□ -0.76
ATG4A-202ENST00000345734 UBXN2AP68543 259 aa10.31□□□□□ -0.76
ATG4A-202ENST00000345734 CCZ1BP86790 482 aa10.31□□□□□ -0.76
ATG4A-202ENST00000345734 CCZ1P86791 482 aaPredicted RBP10.31□□□□□ -0.76
ATG4A-202ENST00000345734 SPP2Q13103 211 aa10.31□□□□□ -0.76
ATG4A-202ENST00000345734 CDKAL1Q5VV42 579 aa10.31□□□□□ -0.76
ATG4A-202ENST00000345734 DCAF15Q66K64 600 aa10.31□□□□□ -0.76
ATG4A-202ENST00000345734 APTXQ7Z2E3 356 aaKnown RBP10.31□□□□□ -0.76
ATG4A-202ENST00000345734 APOBEC3FQ8IUX4 373 aaKnown RBP10.31□□□□□ -0.76
ATG4A-202ENST00000345734 VSTM4Q8IW00 320 aa10.31□□□□□ -0.76
ATG4A-202ENST00000345734 ADSSL1Q8N142 457 aa10.31□□□□□ -0.76
ATG4A-202ENST00000345734 LARP4BQ92615 738 aaKnown RBP10.31□□□□□ -0.76
ATG4A-202ENST00000345734 HPS3Q969F9 1004 aa10.31□□□□□ -0.76
ATG4A-202ENST00000345734 WRNIP1Q96S55 665 aa10.31□□□□□ -0.76
ATG4A-202ENST00000345734 SLF1Q9BQI6 1058 aa10.31□□□□□ -0.76
ATG4A-202ENST00000345734 SPTLC3Q9NUV7 552 aa10.31□□□□□ -0.76
ATG4A-202ENST00000345734 DNAAF2Q9NVR5 837 aaKnown RBP10.31□□□□□ -0.76
ATG4A-202ENST00000345734 STK17AQ9UEE5 414 aa10.31□□□□□ -0.76
ATG4A-202ENST00000345734 MRPL11Q9Y3B7 192 aaKnown RBP10.31□□□□□ -0.76
ATG4A-202ENST00000345734 PARP14Q460N5 1801 aa10.31□□□□□ -0.76
ATG4A-202ENST00000345734 PHIPQ8WWQ0 1821 aa10.31□□□□□ -0.76
ATG4A-202ENST00000345734 MSH4O15457 936 aa10.3□□□□□ -0.76
ATG4A-202ENST00000345734 CYP3A4P08684 503 aa10.3□□□□□ -0.76
ATG4A-202ENST00000345734 FCER1AP12319 257 aa10.3□□□□□ -0.76
ATG4A-202ENST00000345734 VCAM1P19320 739 aa10.3□□□□□ -0.76
ATG4A-202ENST00000345734 ZNF76P36508 570 aa10.3□□□□□ -0.76
ATG4A-202ENST00000345734 CCT6AP40227 531 aaKnown RBP10.3□□□□□ -0.76
ATG4A-202ENST00000345734 PMS1P54277 932 aaKnown RBP10.3□□□□□ -0.76
ATG4A-202ENST00000345734 GSDMDP57764 484 aa10.3□□□□□ -0.76
ATG4A-202ENST00000345734 AMPD3Q01432 767 aa10.3□□□□□ -0.76
ATG4A-202ENST00000345734 GOLGA8FQ08AF8 430 aa10.3□□□□□ -0.76
ATG4A-202ENST00000345734 GOLGA8DPQ0D2H9 430 aa10.3□□□□□ -0.76
ATG4A-202ENST00000345734 STK4Q13043 487 aa10.3□□□□□ -0.76
ATG4A-202ENST00000345734 TRAF1Q13077 416 aa10.3□□□□□ -0.76
ATG4A-202ENST00000345734 TPD52L1Q16890 204 aaPredicted RBP10.3□□□□□ -0.76
ATG4A-202ENST00000345734 DLK2Q6UY11 383 aa10.3□□□□□ -0.76
ATG4A-202ENST00000345734 DYMQ7RTS9 669 aa10.3□□□□□ -0.76
ATG4A-202ENST00000345734 SLFN12Q8IYM2 578 aa10.3□□□□□ -0.76
ATG4A-202ENST00000345734 GIMAP8Q8ND71 665 aaPredicted RBP10.3□□□□□ -0.76
ATG4A-202ENST00000345734 LPAR1Q92633 364 aa10.3□□□□□ -0.76
ATG4A-202ENST00000345734 HOOK2Q96ED9 719 aa10.3□□□□□ -0.76
ATG4A-202ENST00000345734 TANGO6Q9C0B7 1094 aa10.3□□□□□ -0.76
ATG4A-202ENST00000345734 GINM1Q9NU53 330 aa10.3□□□□□ -0.76
ATG4A-202ENST00000345734 ZNF112Q9UJU3 913 aa10.3□□□□□ -0.76
ATG4A-202ENST00000345734 CCPG1Q9ULG6 757 aa10.3□□□□□ -0.76
ATG4A-202ENST00000345734 ABCB11O95342 1321 aa10.3□□□□□ -0.76
ATG4A-202ENST00000345734 POTECB2RU33 542 aa10.3□□□□□ -0.76
ATG4A-202ENST00000345734 DDNO94850 711 aaPredicted RBP10.3□□□□□ -0.76
ATG4A-202ENST00000345734 ICAM1P05362 532 aa10.3□□□□□ -0.76
ATG4A-202ENST00000345734 SPIRE1Q08AE8 756 aa10.3□□□□□ -0.76
ATG4A-202ENST00000345734 NR1I3Q14994 352 aa10.3□□□□□ -0.76
ATG4A-202ENST00000345734 SLC30A10Q6XR72 485 aa10.3□□□□□ -0.76
ATG4A-202ENST00000345734 SCYL3Q8IZE3 742 aa10.3□□□□□ -0.76
ATG4A-202ENST00000345734 PRPF38AQ8NAV1 312 aaKnown RBP10.3□□□□□ -0.76
ATG4A-202ENST00000345734 WDR18Q9BV38 432 aa10.3□□□□□ -0.76
ATG4A-202ENST00000345734 EXOC1Q9NV70 894 aa10.3□□□□□ -0.76
ATG4A-202ENST00000345734 NOD1Q9Y239 953 aa10.3□□□□□ -0.76
ATG4A-202ENST00000345734 SSC5DA1L4H1 1573 aa10.29□□□□□ -0.76
ATG4A-202ENST00000345734 COL11A1P12107 1806 aaPredicted RBP10.29□□□□□ -0.76
ATG4A-202ENST00000345734 IGLV3-22A0A075B6J6 115 aa10.29□□□□□ -0.76
ATG4A-202ENST00000345734 A0A1B0GTH6 734 aa10.29□□□□□ -0.76
ATG4A-202ENST00000345734 E9PMD0 336 aa10.29□□□□□ -0.76
ATG4A-202ENST00000345734 TEX33O43247 280 aa10.29□□□□□ -0.76
ATG4A-202ENST00000345734 MED24O75448 989 aa10.29□□□□□ -0.76
ATG4A-202ENST00000345734 FLOT1O75955 427 aa10.29□□□□□ -0.76
ATG4A-202ENST00000345734 SKILP12757 684 aa10.29□□□□□ -0.76
ATG4A-202ENST00000345734 PTPRAP18433 802 aa10.29□□□□□ -0.76
ATG4A-202ENST00000345734 SH3BP2P78314 561 aa10.29□□□□□ -0.76
ATG4A-202ENST00000345734 MAP7D1Q3KQU3 841 aa10.29□□□□□ -0.76
ATG4A-202ENST00000345734 HYIQ5T013 277 aa10.29□□□□□ -0.76
ATG4A-202ENST00000345734 NCAPH2Q6IBW4 605 aa10.29□□□□□ -0.76
ATG4A-202ENST00000345734 CPXCR1Q8N123 301 aa10.29□□□□□ -0.76
ATG4A-202ENST00000345734 TPCN2Q8NHX9 752 aa10.29□□□□□ -0.76
ATG4A-202ENST00000345734 ZNF592Q92610 1267 aa10.29□□□□□ -0.76
ATG4A-202ENST00000345734 RPAP3Q9H6T3 665 aaPredicted RBP10.29□□□□□ -0.76
ATG4A-202ENST00000345734 RAVER2Q9HCJ3 691 aaKnown RBP10.29□□□□□ -0.76
ATG4A-202ENST00000345734 RLFQ13129 1914 aa10.29□□□□□ -0.76
ATG4A-202ENST00000345734 SFI1A8K8P3 1242 aa10.28□□□□□ -0.76
ATG4A-202ENST00000345734 NFIBO00712 420 aa10.28□□□□□ -0.76
ATG4A-202ENST00000345734 TBX3O15119 743 aa10.28□□□□□ -0.76
ATG4A-202ENST00000345734 BACE1P56817 501 aa10.28□□□□□ -0.76
ATG4A-202ENST00000345734 PRKG1Q13976 671 aa10.28□□□□□ -0.76
ATG4A-202ENST00000345734 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.28□□□□□ -0.76
ATG4A-202ENST00000345734 KIAA0895Q8NCT3 520 aa10.28□□□□□ -0.76
ATG4A-202ENST00000345734 CCDC150Q8NCX0 1101 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms