RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 AGO4Q9HCK5 861 aaKnown RBP16.45■□□□□ 0.22
HMGN3-202ENST00000344726 JPH1Q9HDC5 661 aaPredicted RBP16.45■□□□□ 0.22
HMGN3-202ENST00000344726 PRDM6Q9NQX0 595 aa16.45■□□□□ 0.22
HMGN3-202ENST00000344726 ZNF215Q9UL58 517 aaPredicted RBP16.45■□□□□ 0.22
HMGN3-202ENST00000344726 TPCN1Q9ULQ1 816 aa16.45■□□□□ 0.22
HMGN3-202ENST00000344726 NFASCO94856 1347 aa16.45■□□□□ 0.22
HMGN3-202ENST00000344726 LCHNA4D1U4 455 aa16.44■□□□□ 0.22
HMGN3-202ENST00000344726 RSPH10B2B2RC85 870 aa16.44■□□□□ 0.22
HMGN3-202ENST00000344726 RFXAPO00287 272 aa16.44■□□□□ 0.22
HMGN3-202ENST00000344726 CYP3A4P08684 503 aa16.44■□□□□ 0.22
HMGN3-202ENST00000344726 CTSHP09668 335 aa16.44■□□□□ 0.22
HMGN3-202ENST00000344726 RSPH10BP0C881 870 aa16.44■□□□□ 0.22
HMGN3-202ENST00000344726 MARK3P27448 753 aa16.44■□□□□ 0.22
HMGN3-202ENST00000344726 GNA11P29992 359 aa16.44■□□□□ 0.22
HMGN3-202ENST00000344726 AK2P54819 239 aa16.44■□□□□ 0.22
HMGN3-202ENST00000344726 SSRP1Q08945 709 aaKnown RBP16.44■□□□□ 0.22
HMGN3-202ENST00000344726 RUFY4Q6ZNE9 571 aa16.44■□□□□ 0.22
HMGN3-202ENST00000344726 CCDC148Q8NFR7 591 aa16.44■□□□□ 0.22
HMGN3-202ENST00000344726 ZBTB10Q96DT7 871 aa16.44■□□□□ 0.22
HMGN3-202ENST00000344726 UIMC1Q96RL1 719 aa16.44■□□□□ 0.22
HMGN3-202ENST00000344726 CERS4Q9HA82 394 aa16.44■□□□□ 0.22
HMGN3-202ENST00000344726 SLC9A2Q9UBY0 812 aa16.44■□□□□ 0.22
HMGN3-202ENST00000344726 EVPLQ92817 2033 aa16.44■□□□□ 0.22
HMGN3-202ENST00000344726 COL4A4P53420 1690 aaPredicted RBP16.43■□□□□ 0.22
HMGN3-202ENST00000344726 CPLX1O14810 134 aa16.43■□□□□ 0.22
HMGN3-202ENST00000344726 LGR5O75473 907 aa16.43■□□□□ 0.22
HMGN3-202ENST00000344726 PARNO95453 639 aaKnown RBP16.43■□□□□ 0.22
HMGN3-202ENST00000344726 ZNF76P36508 570 aa16.43■□□□□ 0.22
HMGN3-202ENST00000344726 ACTR2P61160 394 aa16.43■□□□□ 0.22
HMGN3-202ENST00000344726 TAP1Q03518 808 aa16.43■□□□□ 0.22
HMGN3-202ENST00000344726 MARCH8Q5T0T0 291 aa16.43■□□□□ 0.22
HMGN3-202ENST00000344726 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.43■□□□□ 0.22
HMGN3-202ENST00000344726 NIPA1Q7RTP0 329 aa16.43■□□□□ 0.22
HMGN3-202ENST00000344726 PLA2G4DQ86XP0 818 aa16.43■□□□□ 0.22
HMGN3-202ENST00000344726 TRIM22Q8IYM9 498 aa16.43■□□□□ 0.22
HMGN3-202ENST00000344726 DBF4BQ8NFT6 615 aa16.43■□□□□ 0.22
HMGN3-202ENST00000344726 GAS2L1Q99501 681 aaPredicted RBP16.43■□□□□ 0.22
HMGN3-202ENST00000344726 COL25A1Q9BXS0 654 aaPredicted RBP16.43■□□□□ 0.22
HMGN3-202ENST00000344726 SH3GLB2Q9NR46 395 aa16.43■□□□□ 0.22
HMGN3-202ENST00000344726 EMSYQ7Z589 1322 aa16.43■□□□□ 0.22
HMGN3-202ENST00000344726 DHX15O43143 795 aaKnown RBP16.42■□□□□ 0.22
HMGN3-202ENST00000344726 DEXIO95424 95 aa16.42■□□□□ 0.22
HMGN3-202ENST00000344726 CCNE2O96020 404 aa16.42■□□□□ 0.22
HMGN3-202ENST00000344726 KCNJ6P48051 423 aa16.42■□□□□ 0.22
HMGN3-202ENST00000344726 NPY5RQ15761 445 aa16.42■□□□□ 0.22
HMGN3-202ENST00000344726 PLEKHG4Q58EX7 1191 aa16.42■□□□□ 0.22
HMGN3-202ENST00000344726 PPM1EQ8WY54 764 aa16.42■□□□□ 0.22
HMGN3-202ENST00000344726 SDF4Q9BRK5 362 aa16.42■□□□□ 0.22
HMGN3-202ENST00000344726 ABHD14A-ACY1A0A1B0GW23 586 aa16.41■□□□□ 0.22
HMGN3-202ENST00000344726 M0R2N6 131 aa16.41■□□□□ 0.22
HMGN3-202ENST00000344726 DDX39AO00148 427 aaKnown RBP16.41■□□□□ 0.22
HMGN3-202ENST00000344726 PFKFB2O60825 505 aa16.41■□□□□ 0.22
HMGN3-202ENST00000344726 ATG7O95352 703 aa16.41■□□□□ 0.22
HMGN3-202ENST00000344726 LARGE1O95461 756 aa16.41■□□□□ 0.22
HMGN3-202ENST00000344726 CTDNEP1O95476 244 aa16.41■□□□□ 0.22
HMGN3-202ENST00000344726 IGFBP4P22692 258 aa16.41■□□□□ 0.22
HMGN3-202ENST00000344726 NLRP5P59047 1200 aa16.41■□□□□ 0.22
HMGN3-202ENST00000344726 MCTP2Q6DN12 878 aa16.41■□□□□ 0.22
HMGN3-202ENST00000344726 BICD2Q8TD16 824 aa16.41■□□□□ 0.22
HMGN3-202ENST00000344726 GLG1Q92896 1179 aa16.41■□□□□ 0.22
HMGN3-202ENST00000344726 LENG9Q96B70 501 aa16.41■□□□□ 0.22
HMGN3-202ENST00000344726 SLKQ9H2G2 1235 aaPredicted RBP16.41■□□□□ 0.22
HMGN3-202ENST00000344726 SMARCAD1Q9H4L7 1026 aa16.41■□□□□ 0.22
HMGN3-202ENST00000344726 ERAP1Q9NZ08 941 aa16.41■□□□□ 0.22
HMGN3-202ENST00000344726 NRCAMQ92823 1304 aa16.41■□□□□ 0.22
HMGN3-202ENST00000344726 MBLAC1A4D2B0 266 aaPredicted RBP16.4■□□□□ 0.22
HMGN3-202ENST00000344726 TLL1O43897 1013 aa16.4■□□□□ 0.22
HMGN3-202ENST00000344726 CAND2O75155 1236 aa16.4■□□□□ 0.22
HMGN3-202ENST00000344726 GJB5O95377 273 aa16.4■□□□□ 0.22
HMGN3-202ENST00000344726 GNAT1P11488 350 aa16.4■□□□□ 0.22
HMGN3-202ENST00000344726 CIITAP33076 1130 aa16.4■□□□□ 0.22
HMGN3-202ENST00000344726 MGAT3Q09327 533 aa16.4■□□□□ 0.22
HMGN3-202ENST00000344726 PPFIA1Q13136 1202 aa16.4■□□□□ 0.22
HMGN3-202ENST00000344726 IKBKEQ14164 716 aa16.4■□□□□ 0.22
HMGN3-202ENST00000344726 CCDC85BQ15834 202 aaPredicted RBP16.4■□□□□ 0.22
HMGN3-202ENST00000344726 GRIK4Q16099 956 aa16.4■□□□□ 0.22
HMGN3-202ENST00000344726 FAM26DQ5JW98 314 aa16.4■□□□□ 0.22
HMGN3-202ENST00000344726 KRT40Q6A162 431 aa16.4■□□□□ 0.22
HMGN3-202ENST00000344726 FAM117BQ6P1L5 589 aa16.4■□□□□ 0.22
HMGN3-202ENST00000344726 PCDHA4Q9UN74 947 aa16.4■□□□□ 0.22
HMGN3-202ENST00000344726 XIRP2A4UGR9 3374 aa16.4■□□□□ 0.22
HMGN3-202ENST00000344726 IGKV6D-21A0A0A0MT36 114 aa16.39■□□□□ 0.21
HMGN3-202ENST00000344726 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.39■□□□□ 0.21
HMGN3-202ENST00000344726 IPO5O00410 1097 aaKnown RBP16.39■□□□□ 0.21
HMGN3-202ENST00000344726 CHRNA1P02708 482 aa16.39■□□□□ 0.21
HMGN3-202ENST00000344726 PLCB4Q15147 1175 aa16.39■□□□□ 0.21
HMGN3-202ENST00000344726 ME3Q16798 604 aa16.39■□□□□ 0.21
HMGN3-202ENST00000344726 C8orf34Q49A92 452 aa16.39■□□□□ 0.21
HMGN3-202ENST00000344726 PRR16Q569H4 304 aa16.39■□□□□ 0.21
HMGN3-202ENST00000344726 CPLX2Q6PUV4 134 aaKnown RBP16.39■□□□□ 0.21
HMGN3-202ENST00000344726 ABHD15Q6UXT9 468 aa16.39■□□□□ 0.21
HMGN3-202ENST00000344726 ARNTL2Q8WYA1 636 aa16.39■□□□□ 0.21
HMGN3-202ENST00000344726 ZNF577Q9BSK1 485 aa16.39■□□□□ 0.21
HMGN3-202ENST00000344726 GJB4Q9NTQ9 266 aa16.39■□□□□ 0.21
HMGN3-202ENST00000344726 TUBE1Q9UJT0 475 aa16.39■□□□□ 0.21
HMGN3-202ENST00000344726 KCNJ14Q9UNX9 436 aa16.39■□□□□ 0.21
HMGN3-202ENST00000344726 LPXNO60711 386 aa16.38■□□□□ 0.21
HMGN3-202ENST00000344726 INSRRP14616 1297 aa16.38■□□□□ 0.21
HMGN3-202ENST00000344726 STAT5BP51692 787 aa16.38■□□□□ 0.21
HMGN3-202ENST00000344726 NEK4P51957 841 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms