RNA–Protein interactions for RNA: ENST00000343053.4

NELFB-201, Transcript of negative elongation factor complex member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NELFB, Length 2,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFB-201ENST00000343053 RAD51CO43502 376 aa26.37■■□□□ 1.81
NELFB-201ENST00000343053 VPS72Q15906 364 aa26.37■■□□□ 1.81
NELFB-201ENST00000343053 PACS2Q86VP3 889 aa26.37■■□□□ 1.81
NELFB-201ENST00000343053 IFT20Q8IY31 132 aa26.37■■□□□ 1.81
NELFB-201ENST00000343053 OPA1O60313 960 aa26.37■■□□□ 1.81
NELFB-201ENST00000343053 CORO7P57737 925 aa26.37■■□□□ 1.81
NELFB-201ENST00000343053 KCNA1Q09470 495 aa26.37■■□□□ 1.81
NELFB-201ENST00000343053 MEI1Q5TIA1 1274 aa26.37■■□□□ 1.81
NELFB-201ENST00000343053 CATSPER3Q86XQ3 398 aa26.37■■□□□ 1.81
NELFB-201ENST00000343053 AP1M1Q9BXS5 423 aa26.37■■□□□ 1.81
NELFB-201ENST00000343053 EDEM3Q9BZQ6 932 aa26.37■■□□□ 1.81
NELFB-201ENST00000343053 FOCADQ5VW36 1801 aa26.36■■□□□ 1.81
NELFB-201ENST00000343053 SFI1A8K8P3 1242 aa26.36■■□□□ 1.81
NELFB-201ENST00000343053 CETN3O15182 167 aa26.36■■□□□ 1.81
NELFB-201ENST00000343053 CLIC2O15247 247 aa26.36■■□□□ 1.81
NELFB-201ENST00000343053 SLC20A2Q08357 652 aa26.36■■□□□ 1.81
NELFB-201ENST00000343053 NNTQ13423 1086 aa26.36■■□□□ 1.81
NELFB-201ENST00000343053 CFAP58Q5T655 872 aa26.36■■□□□ 1.81
NELFB-201ENST00000343053 INPP4AQ96PE3 977 aaPredicted RBP26.36■■□□□ 1.81
NELFB-201ENST00000343053 REEP2Q9BRK0 252 aa26.36■■□□□ 1.81
NELFB-201ENST00000343053 DHX36Q9H2U1 1008 aaKnown RBP26.36■■□□□ 1.81
NELFB-201ENST00000343053 CENPHQ9H3R5 247 aa26.36■■□□□ 1.81
NELFB-201ENST00000343053 ZNF233A6NK53 670 aa26.36■■□□□ 1.81
NELFB-201ENST00000343053 CASP4P49662 377 aa26.36■■□□□ 1.81
NELFB-201ENST00000343053 CDC37Q16543 378 aaPredicted RBP26.36■■□□□ 1.81
NELFB-201ENST00000343053 PPP1R18Q6NYC8 613 aa26.36■■□□□ 1.81
NELFB-201ENST00000343053 CDC42EP5Q6NZY7 148 aa26.36■■□□□ 1.81
NELFB-201ENST00000343053 DDX42Q86XP3 938 aaKnown RBP eCLIP26.36■■□□□ 1.81
NELFB-201ENST00000343053 ATF5Q9Y2D1 282 aaPredicted RBP26.36■■□□□ 1.81
NELFB-201ENST00000343053 SLC12A3P55017 1021 aa26.35■■□□□ 1.81
NELFB-201ENST00000343053 HLTFQ14527 1009 aaKnown RBP eCLIP26.35■■□□□ 1.81
NELFB-201ENST00000343053 CAVIN3Q969G5 261 aa26.35■■□□□ 1.81
NELFB-201ENST00000343053 LUC7LQ9NQ29 371 aaKnown RBP26.35■■□□□ 1.81
NELFB-201ENST00000343053 EIF3HO15372 352 aaKnown RBP eCLIP26.35■■□□□ 1.811e-8■□□□□ 8.9
NELFB-201ENST00000343053 MAGEA9P43362 315 aa26.35■■□□□ 1.81
NELFB-201ENST00000343053 IKQ13123 557 aaPredicted RBP26.35■■□□□ 1.81
NELFB-201ENST00000343053 DNAJC18Q9H819 358 aa26.35■■□□□ 1.81
NELFB-201ENST00000343053 PCDHGC5Q9Y5F6 944 aa26.35■■□□□ 1.81
NELFB-201ENST00000343053 GCFC2P16383 781 aaKnown RBP26.34■■□□□ 1.81
NELFB-201ENST00000343053 HOXD13P35453 343 aa26.34■■□□□ 1.81
NELFB-201ENST00000343053 RBM46Q8TBY0 533 aaKnown RBP26.34■■□□□ 1.81
NELFB-201ENST00000343053 GDF3Q9NR23 364 aa26.34■■□□□ 1.81
NELFB-201ENST00000343053 KCNQ5Q9NR82 932 aa26.34■■□□□ 1.81
NELFB-201ENST00000343053 TSKSQ9UJT2 592 aa26.34■■□□□ 1.81
NELFB-201ENST00000343053 CEP104O60308 925 aa26.34■■□□□ 1.81
NELFB-201ENST00000343053 LIG3P49916 1009 aa26.34■■□□□ 1.81
NELFB-201ENST00000343053 DDR1Q08345 913 aa26.34■■□□□ 1.81
NELFB-201ENST00000343053 GPATCH4Q5T3I0 446 aaKnown RBP26.34■■□□□ 1.81
NELFB-201ENST00000343053 CYP2W1Q8TAV3 490 aa26.34■■□□□ 1.81
NELFB-201ENST00000343053 NUCKS1Q9H1E3 243 aaKnown RBP26.34■■□□□ 1.81
NELFB-201ENST00000343053 KCNMB3Q9NPA1 279 aa26.34■■□□□ 1.81
NELFB-201ENST00000343053 ARMCX3Q9UH62 379 aaPredicted RBP26.34■■□□□ 1.81
NELFB-201ENST00000343053 EEF2P13639 858 aaKnown RBP26.33■■□□□ 1.81
NELFB-201ENST00000343053 UCHL3P15374 230 aa26.33■■□□□ 1.81
NELFB-201ENST00000343053 HOXA13P31271 388 aaPredicted RBP26.33■■□□□ 1.81
NELFB-201ENST00000343053 GUCY1A3Q02108 690 aa26.33■■□□□ 1.81
NELFB-201ENST00000343053 PAK2Q13177 524 aa26.33■■□□□ 1.81
NELFB-201ENST00000343053 SEPT2Q15019 361 aa26.33■■□□□ 1.81
NELFB-201ENST00000343053 SYN2Q92777 582 aaPredicted RBP26.33■■□□□ 1.81
NELFB-201ENST00000343053 TMCO5BA8MYB1 307 aa26.33■■□□□ 1.81
NELFB-201ENST00000343053 HYIQ5T013 277 aa26.33■■□□□ 1.81
NELFB-201ENST00000343053 AKAP3O75969 853 aa26.32■■□□□ 1.8
NELFB-201ENST00000343053 GNA14O95837 355 aa26.32■■□□□ 1.8
NELFB-201ENST00000343053 GIT2Q14161 759 aa26.32■■□□□ 1.8
NELFB-201ENST00000343053 MAATS1Q7Z4T9 603 aa26.32■■□□□ 1.8
NELFB-201ENST00000343053 OR2W6PQ8NHA6 318 aa26.32■■□□□ 1.8
NELFB-201ENST00000343053 CERKQ8TCT0 537 aa26.32■■□□□ 1.8
NELFB-201ENST00000343053 TAF4BQ92750 862 aa26.32■■□□□ 1.8
NELFB-201ENST00000343053 AIPL1Q9NZN9 384 aa26.32■■□□□ 1.8
NELFB-201ENST00000343053 ARHGAP4P98171 946 aa26.32■■□□□ 1.8
NELFB-201ENST00000343053 ALS2CLQ60I27 953 aa26.32■■□□□ 1.8
NELFB-201ENST00000343053 IRF2BP2Q7Z5L9 587 aa26.32■■□□□ 1.8
NELFB-201ENST00000343053 USP38Q8NB14 1042 aa26.32■■□□□ 1.8
NELFB-201ENST00000343053 PIK3R5Q8WYR1 880 aa26.32■■□□□ 1.8
NELFB-201ENST00000343053 PCDHB13Q9Y5F0 798 aa26.32■■□□□ 1.8
NELFB-201ENST00000343053 SMCHD1A6NHR9 2005 aa26.32■■□□□ 1.8
NELFB-201ENST00000343053 PPEF1O14829 653 aaPredicted RBP26.32■■□□□ 1.8
NELFB-201ENST00000343053 POLD1P28340 1107 aa26.32■■□□□ 1.8
NELFB-201ENST00000343053 RPS6KA1Q15418 735 aa26.32■■□□□ 1.8
NELFB-201ENST00000343053 PLCD3Q8N3E9 789 aa26.32■■□□□ 1.8
NELFB-201ENST00000343053 MICALL1Q8N3F8 863 aa26.32■■□□□ 1.8
NELFB-201ENST00000343053 RNPC3Q96LT9 517 aaKnown RBP26.32■■□□□ 1.8
NELFB-201ENST00000343053 FAM86B1E9PN63 330 aa26.31■■□□□ 1.8
NELFB-201ENST00000343053 MEIS2O14770 477 aa26.31■■□□□ 1.8
NELFB-201ENST00000343053 BBOX1O75936 387 aa26.31■■□□□ 1.8
NELFB-201ENST00000343053 GDF11O95390 407 aa26.31■■□□□ 1.8
NELFB-201ENST00000343053 HLA-DOAP06340 250 aa26.31■■□□□ 1.8
NELFB-201ENST00000343053 FAM86B2P0C5J1 330 aa26.31■■□□□ 1.8
NELFB-201ENST00000343053 EXOC3L4Q17RC7 722 aa26.31■■□□□ 1.8
NELFB-201ENST00000343053 TTC31Q49AM3 519 aaPredicted RBP26.31■■□□□ 1.8
NELFB-201ENST00000343053 KSR1Q8IVT5 923 aa26.31■■□□□ 1.8
NELFB-201ENST00000343053 BHMT2Q9H2M3 363 aa26.31■■□□□ 1.8
NELFB-201ENST00000343053 EBAG9O00559 213 aa26.31■■□□□ 1.8
NELFB-201ENST00000343053 GCNT3O95395 438 aa26.31■■□□□ 1.8
NELFB-201ENST00000343053 PON1P27169 355 aa26.31■■□□□ 1.8
NELFB-201ENST00000343053 SLFN13Q68D06 897 aa26.31■■□□□ 1.8
NELFB-201ENST00000343053 DDX47Q9H0S4 455 aaKnown RBP26.31■■□□□ 1.8
NELFB-201ENST00000343053 RGL1Q9NZL6 768 aa26.31■■□□□ 1.8
NELFB-201ENST00000343053 FAM169AQ9Y6X4 670 aa26.31■■□□□ 1.8
NELFB-201ENST00000343053 SHTN1A0MZ66 631 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms