RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 FAM49AQ9H0Q0 323 aaPredicted RBP16.41■□□□□ 0.22
COL11A2-201ENST00000341947 SLITRK6Q9H5Y7 841 aa16.41■□□□□ 0.22
COL11A2-201ENST00000341947 ANTXR1Q9H6X2 564 aa16.41■□□□□ 0.22
COL11A2-201ENST00000341947 SUCLA2Q9P2R7 463 aaPredicted RBP16.41■□□□□ 0.22
COL11A2-201ENST00000341947 ADGRL2O95490 1459 aa16.41■□□□□ 0.22
COL11A2-201ENST00000341947 LDHAP00338 332 aaKnown RBP16.41■□□□□ 0.22
COL11A2-201ENST00000341947 HOXA13P31271 388 aaPredicted RBP16.41■□□□□ 0.22
COL11A2-201ENST00000341947 PDCD2Q16342 344 aaPredicted RBP16.41■□□□□ 0.22
COL11A2-201ENST00000341947 RNF219Q5W0B1 726 aaPredicted RBP16.41■□□□□ 0.22
COL11A2-201ENST00000341947 TTLL6Q8N841 843 aa16.41■□□□□ 0.22
COL11A2-201ENST00000341947 KIF21AQ7Z4S6 1674 aa16.41■□□□□ 0.22
COL11A2-201ENST00000341947 K7ERI5 159 aa16.41■□□□□ 0.22
COL11A2-201ENST00000341947 MOCS3O95396 460 aa16.41■□□□□ 0.22
COL11A2-201ENST00000341947 CDK8P49336 464 aa16.41■□□□□ 0.22
COL11A2-201ENST00000341947 TTC19Q6DKK2 380 aaPredicted RBP16.41■□□□□ 0.22
COL11A2-201ENST00000341947 RWDD4Q6NW29 188 aaKnown RBP16.41■□□□□ 0.22
COL11A2-201ENST00000341947 RABGGTAQ92696 567 aa16.41■□□□□ 0.22
COL11A2-201ENST00000341947 DRC3Q9H069 523 aa16.41■□□□□ 0.22
COL11A2-201ENST00000341947 THEGQ9P2T0 379 aa16.41■□□□□ 0.22
COL11A2-201ENST00000341947 ZNF18P17022 549 aa16.4■□□□□ 0.22
COL11A2-201ENST00000341947 PLCG1P19174 1290 aa16.4■□□□□ 0.22
COL11A2-201ENST00000341947 DNAJC8O75937 253 aaPredicted RBP16.4■□□□□ 0.22
COL11A2-201ENST00000341947 TRIM67Q6ZTA4 783 aa16.4■□□□□ 0.22
COL11A2-201ENST00000341947 DCAF4Q8WV16 495 aa16.4■□□□□ 0.22
COL11A2-201ENST00000341947 MASTLQ96GX5 879 aa16.4■□□□□ 0.22
COL11A2-201ENST00000341947 PDE11AQ9HCR9 933 aa16.4■□□□□ 0.22
COL11A2-201ENST00000341947 SLMAPQ14BN4 828 aa16.4■□□□□ 0.22
COL11A2-201ENST00000341947 C2orf69Q8N8R5 385 aa16.4■□□□□ 0.22
COL11A2-201ENST00000341947 CFAP74Q9C0B2 1584 aa16.4■□□□□ 0.22
COL11A2-201ENST00000341947 FTCDO95954 541 aa16.4■□□□□ 0.22
COL11A2-201ENST00000341947 C2orf54Q08AI8 447 aa16.4■□□□□ 0.22
COL11A2-201ENST00000341947 PPP4R3CPQ6ZMV5 832 aa16.4■□□□□ 0.22
COL11A2-201ENST00000341947 TMEM179Q6ZVK1 233 aa16.4■□□□□ 0.22
COL11A2-201ENST00000341947 ERICH1Q86X53 443 aa16.4■□□□□ 0.22
COL11A2-201ENST00000341947 GRAMD1CQ8IYS0 662 aa16.4■□□□□ 0.22
COL11A2-201ENST00000341947 SCYL3Q8IZE3 742 aa16.4■□□□□ 0.22
COL11A2-201ENST00000341947 GPT2Q8TD30 523 aa16.4■□□□□ 0.22
COL11A2-201ENST00000341947 HSPH1Q92598 858 aa16.4■□□□□ 0.22
COL11A2-201ENST00000341947 ALKBH8Q96BT7 664 aaKnown RBP16.4■□□□□ 0.22
COL11A2-201ENST00000341947 SCINQ9Y6U3 715 aa16.4■□□□□ 0.22
COL11A2-201ENST00000341947 NPHP4O75161 1426 aaPredicted RBP16.4■□□□□ 0.22
COL11A2-201ENST00000341947 GOLGA8IPA6NC78 632 aa16.4■□□□□ 0.22
COL11A2-201ENST00000341947 GOLGA8JA6NMD2 632 aa16.4■□□□□ 0.22
COL11A2-201ENST00000341947 SNCBQ16143 134 aa16.4■□□□□ 0.22
COL11A2-201ENST00000341947 AATKQ6ZMQ8 1374 aa16.4■□□□□ 0.22
COL11A2-201ENST00000341947 TDRD7Q8NHU6 1098 aaKnown RBP16.4■□□□□ 0.22
COL11A2-201ENST00000341947 FTOQ9C0B1 505 aaKnown RBP eCLIP16.4■□□□□ 0.22
COL11A2-201ENST00000341947 PUS7LQ9H0K6 701 aaKnown RBP16.4■□□□□ 0.22
COL11A2-201ENST00000341947 GIMAP8Q8ND71 665 aaPredicted RBP16.39■□□□□ 0.21
COL11A2-201ENST00000341947 FBXL13Q8NEE6 735 aa16.39■□□□□ 0.21
COL11A2-201ENST00000341947 RNF14Q9UBS8 474 aa16.39■□□□□ 0.21
COL11A2-201ENST00000341947 SETSIPP0DME0 302 aa16.39■□□□□ 0.21
COL11A2-201ENST00000341947 PAMP19021 973 aa16.39■□□□□ 0.21
COL11A2-201ENST00000341947 CCNE1P24864 410 aa16.39■□□□□ 0.21
COL11A2-201ENST00000341947 YWHAHQ04917 246 aaPredicted RBP16.39■□□□□ 0.21
COL11A2-201ENST00000341947 CXorf38Q8TB03 319 aa16.39■□□□□ 0.21
COL11A2-201ENST00000341947 POLIQ9UNA4 740 aa16.39■□□□□ 0.21
COL11A2-201ENST00000341947 FAF1Q9UNN5 650 aaPredicted RBP16.39■□□□□ 0.21
COL11A2-201ENST00000341947 TNFAIP2Q03169 654 aa16.39■□□□□ 0.21
COL11A2-201ENST00000341947 NHEJ1Q9H9Q4 299 aaPredicted RBP16.39■□□□□ 0.21
COL11A2-201ENST00000341947 PHLPP2Q6ZVD8 1323 aa16.39■□□□□ 0.21
COL11A2-201ENST00000341947 SNAP25P60880 206 aa16.39■□□□□ 0.21
COL11A2-201ENST00000341947 ARHGEF25Q86VW2 580 aa16.39■□□□□ 0.21
COL11A2-201ENST00000341947 FAM167AQ96KS9 214 aa16.39■□□□□ 0.21
COL11A2-201ENST00000341947 ZWILCHQ9H900 591 aa16.39■□□□□ 0.21
COL11A2-201ENST00000341947 DONSONQ9NYP3 566 aa16.39■□□□□ 0.21
COL11A2-201ENST00000341947 GOLGA8FQ08AF8 430 aa16.39■□□□□ 0.21
COL11A2-201ENST00000341947 GOLGA8DPQ0D2H9 430 aa16.39■□□□□ 0.21
COL11A2-201ENST00000341947 ZKSCAN8Q15776 578 aaPredicted RBP16.39■□□□□ 0.21
COL11A2-201ENST00000341947 FAM182BQ5T319 152 aa16.39■□□□□ 0.21
COL11A2-201ENST00000341947 MMTAG2Q9BU76 263 aaKnown RBP16.39■□□□□ 0.21
COL11A2-201ENST00000341947 BSDC1Q9NW68 430 aaPredicted RBP16.39■□□□□ 0.21
COL11A2-201ENST00000341947 PLEKHG1Q9ULL1 1385 aa16.38■□□□□ 0.21
COL11A2-201ENST00000341947 PSMA2P25787 234 aa16.38■□□□□ 0.21
COL11A2-201ENST00000341947 NR5A1Q13285 461 aa16.38■□□□□ 0.21
COL11A2-201ENST00000341947 TRIP13Q15645 432 aaPredicted RBP16.38■□□□□ 0.21
COL11A2-201ENST00000341947 ATP6V0A4Q9HBG4 840 aa16.38■□□□□ 0.21
COL11A2-201ENST00000341947 NEO1Q92859 1461 aa16.38■□□□□ 0.21
COL11A2-201ENST00000341947 EIF4A3P38919 411 aaKnown RBP16.38■□□□□ 0.21
COL11A2-201ENST00000341947 CDO1Q16878 200 aa16.38■□□□□ 0.21
COL11A2-201ENST00000341947 HSP90AA5PQ58FG0 334 aa16.38■□□□□ 0.21
COL11A2-201ENST00000341947 IFNAR1P17181 557 aa16.38■□□□□ 0.21
COL11A2-201ENST00000341947 RECQLP46063 649 aaPredicted RBP16.38■□□□□ 0.21
COL11A2-201ENST00000341947 AP3B2Q13367 1082 aa16.38■□□□□ 0.21
COL11A2-201ENST00000341947 DPCR1Q3MIW9 517 aa16.38■□□□□ 0.21
COL11A2-201ENST00000341947 ZNF667Q5HYK9 610 aa16.38■□□□□ 0.21
COL11A2-201ENST00000341947 KRT82Q9NSB4 513 aa16.38■□□□□ 0.21
COL11A2-201ENST00000341947 SRPRBQ9Y5M8 271 aaKnown RBP16.38■□□□□ 0.21
COL11A2-201ENST00000341947 PLS3P13797 630 aa16.38■□□□□ 0.21
COL11A2-201ENST00000341947 NFX1Q12986 1120 aaKnown RBP16.38■□□□□ 0.21
COL11A2-201ENST00000341947 ART3Q13508 389 aa16.38■□□□□ 0.21
COL11A2-201ENST00000341947 TUBB6Q9BUF5 446 aa16.38■□□□□ 0.21
COL11A2-201ENST00000341947 SH3GLB2Q9NR46 395 aa16.38■□□□□ 0.21
COL11A2-201ENST00000341947 PCDHA13Q9Y5I0 950 aa16.38■□□□□ 0.21
COL11A2-201ENST00000341947 STK25O00506 426 aa16.38■□□□□ 0.21
COL11A2-201ENST00000341947 ASNSP08243 561 aa16.38■□□□□ 0.21
COL11A2-201ENST00000341947 RASEFQ8IZ41 740 aa16.38■□□□□ 0.21
COL11A2-201ENST00000341947 NLRP1Q9C000 1473 aa16.37■□□□□ 0.21
COL11A2-201ENST00000341947 IQANK1A0A1B0GTG1 560 aa16.37■□□□□ 0.21
COL11A2-201ENST00000341947 EXOC1LA0A1B0GW35 172 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms