RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 A0A087WWV3 80 aa14.88□□□□□ -0.03
TUBD1-202ENST00000340993 WDR64B1ANS9 1081 aa14.88□□□□□ -0.03
TUBD1-202ENST00000340993 OR52Z1P0C646 297 aa14.88□□□□□ -0.03
TUBD1-202ENST00000340993 SMIM10L2AP0DMW4 78 aa14.88□□□□□ -0.03
TUBD1-202ENST00000340993 SMIM10L2BP0DMW5 78 aa14.88□□□□□ -0.03
TUBD1-202ENST00000340993 STAT5BP51692 787 aa14.88□□□□□ -0.03
TUBD1-202ENST00000340993 TPRNQ4KMQ1 711 aa14.88□□□□□ -0.03
TUBD1-202ENST00000340993 GDF6Q6KF10 455 aaPredicted RBP14.88□□□□□ -0.03
TUBD1-202ENST00000340993 ZNF746Q6NUN9 644 aaPredicted RBP14.88□□□□□ -0.03
TUBD1-202ENST00000340993 RIT2Q99578 217 aa14.88□□□□□ -0.03
TUBD1-202ENST00000340993 PPP1R12CQ9BZL4 782 aa14.88□□□□□ -0.03
TUBD1-202ENST00000340993 KPNA6O60684 536 aa14.88□□□□□ -0.03
TUBD1-202ENST00000340993 PSAPP07602 524 aa14.88□□□□□ -0.03
TUBD1-202ENST00000340993 RGS19P49795 217 aa14.88□□□□□ -0.03
TUBD1-202ENST00000340993 KATNAL1Q9BW62 490 aa14.88□□□□□ -0.03
TUBD1-202ENST00000340993 TSHZ2Q9NRE2 1034 aa14.88□□□□□ -0.03
TUBD1-202ENST00000340993 RGL1Q9NZL6 768 aa14.88□□□□□ -0.03
TUBD1-202ENST00000340993 PCDHA10Q9Y5I2 948 aa14.88□□□□□ -0.03
TUBD1-202ENST00000340993 CLIC4Q9Y696 253 aa14.88□□□□□ -0.03
TUBD1-202ENST00000340993 HOXD8P13378 290 aaPredicted RBP14.87□□□□□ -0.03
TUBD1-202ENST00000340993 CTTNQ14247 550 aaKnown RBP14.87□□□□□ -0.03
TUBD1-202ENST00000340993 ZRSR1Q15695 479 aaKnown RBP14.87□□□□□ -0.03
TUBD1-202ENST00000340993 PTGISQ16647 500 aa14.87□□□□□ -0.03
TUBD1-202ENST00000340993 RILPL1Q5EBL4 403 aa14.87□□□□□ -0.03
TUBD1-202ENST00000340993 FAM160B1Q5W0V3 765 aa14.87□□□□□ -0.03
TUBD1-202ENST00000340993 SLFN12Q8IYM2 578 aa14.87□□□□□ -0.03
TUBD1-202ENST00000340993 FAM20AQ96MK3 541 aa14.87□□□□□ -0.03
TUBD1-202ENST00000340993 MTMR9Q96QG7 549 aa14.87□□□□□ -0.03
TUBD1-202ENST00000340993 SMARCAD1Q9H4L7 1026 aa14.87□□□□□ -0.03
TUBD1-202ENST00000340993 BMP2KQ9NSY1 1161 aaPredicted RBP14.87□□□□□ -0.03
TUBD1-202ENST00000340993 ERAP1Q9NZ08 941 aa14.87□□□□□ -0.03
TUBD1-202ENST00000340993 PCDHA12Q9UN75 941 aa14.87□□□□□ -0.03
TUBD1-202ENST00000340993 TCHHQ07283 1943 aa14.87□□□□□ -0.03
TUBD1-202ENST00000340993 DCDC2CA8MYV0 355 aa14.86□□□□□ -0.03
TUBD1-202ENST00000340993 CLTBP09497 229 aa14.86□□□□□ -0.03
TUBD1-202ENST00000340993 ZSCAN22P10073 491 aaPredicted RBP14.86□□□□□ -0.03
TUBD1-202ENST00000340993 CDC25AP30304 524 aa14.86□□□□□ -0.03
TUBD1-202ENST00000340993 TRAPPC10P48553 1259 aa14.86□□□□□ -0.03
TUBD1-202ENST00000340993 FAAP100Q0VG06 881 aa14.86□□□□□ -0.03
TUBD1-202ENST00000340993 PPFIA1Q13136 1202 aa14.86□□□□□ -0.03
TUBD1-202ENST00000340993 PLCB4Q15147 1175 aa14.86□□□□□ -0.03
TUBD1-202ENST00000340993 SF3A1Q15459 793 aaKnown RBP14.86□□□□□ -0.03
TUBD1-202ENST00000340993 BRAPQ7Z569 592 aa14.86□□□□□ -0.03
TUBD1-202ENST00000340993 FAM126BQ8IXS8 530 aa14.86□□□□□ -0.03
TUBD1-202ENST00000340993 SMAP1Q8IYB5 467 aaPredicted RBP14.86□□□□□ -0.03
TUBD1-202ENST00000340993 DYDC2Q96IM9 177 aa14.86□□□□□ -0.03
TUBD1-202ENST00000340993 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.86□□□□□ -0.03
TUBD1-202ENST00000340993 TMEM39AQ9NV64 488 aa14.86□□□□□ -0.03
TUBD1-202ENST00000340993 TFIP11Q9UBB9 837 aaKnown RBP14.86□□□□□ -0.03
TUBD1-202ENST00000340993 UMODL1Q5DID0 1318 aa14.86□□□□□ -0.03
TUBD1-202ENST00000340993 SCN5AQ14524 2016 aa14.86□□□□□ -0.03
TUBD1-202ENST00000340993 C17orf102A2RUQ5 167 aa14.85□□□□□ -0.03
TUBD1-202ENST00000340993 TRIM43BA6NCK2 446 aa14.85□□□□□ -0.03
TUBD1-202ENST00000340993 PP2D1A8MPX8 630 aa14.85□□□□□ -0.03
TUBD1-202ENST00000340993 H0YGN5 161 aa14.85□□□□□ -0.03
TUBD1-202ENST00000340993 HAS3O00219 553 aa14.85□□□□□ -0.03
TUBD1-202ENST00000340993 TREHO43280 583 aa14.85□□□□□ -0.03
TUBD1-202ENST00000340993 LGR5O75473 907 aa14.85□□□□□ -0.03
TUBD1-202ENST00000340993 F13A1P00488 732 aa14.85□□□□□ -0.03
TUBD1-202ENST00000340993 ATP4AP20648 1035 aa14.85□□□□□ -0.03
TUBD1-202ENST00000340993 MARCKSP29966 332 aaPredicted RBP14.85□□□□□ -0.03
TUBD1-202ENST00000340993 CDK7P50613 346 aa14.85□□□□□ -0.03
TUBD1-202ENST00000340993 JAK3P52333 1124 aa14.85□□□□□ -0.03
TUBD1-202ENST00000340993 MDM2Q00987 491 aaPredicted RBP14.85□□□□□ -0.03
TUBD1-202ENST00000340993 PRKCEQ02156 737 aa14.85□□□□□ -0.03
TUBD1-202ENST00000340993 SNX17Q15036 470 aa14.85□□□□□ -0.03
TUBD1-202ENST00000340993 PLA2G4FQ68DD2 849 aa14.85□□□□□ -0.03
TUBD1-202ENST00000340993 TPH2Q8IWU9 490 aa14.85□□□□□ -0.03
TUBD1-202ENST00000340993 TRIM43Q96BQ3 446 aaPredicted RBP14.85□□□□□ -0.03
TUBD1-202ENST00000340993 PDLIM7Q9NR12 457 aa14.85□□□□□ -0.03
TUBD1-202ENST00000340993 EMSYQ7Z589 1322 aa14.85□□□□□ -0.03
TUBD1-202ENST00000340993 POTEB3A0JP26 581 aa14.85□□□□□ -0.03
TUBD1-202ENST00000340993 VWA3AA6NCI4 1184 aa14.85□□□□□ -0.03
TUBD1-202ENST00000340993 ZNF862O60290 1169 aa14.85□□□□□ -0.03
TUBD1-202ENST00000340993 ATG7O95352 703 aa14.85□□□□□ -0.03
TUBD1-202ENST00000340993 PPP2R5CQ13362 524 aa14.85□□□□□ -0.03
TUBD1-202ENST00000340993 GRIK4Q16099 956 aa14.85□□□□□ -0.03
TUBD1-202ENST00000340993 IL17AQ16552 155 aa14.85□□□□□ -0.03
TUBD1-202ENST00000340993 POTEBQ6S5H4 581 aa14.85□□□□□ -0.03
TUBD1-202ENST00000340993 C4orf32Q8N8J7 132 aa14.85□□□□□ -0.03
TUBD1-202ENST00000340993 LMBR1Q8WVP7 490 aa14.85□□□□□ -0.03
TUBD1-202ENST00000340993 ATP6V0A1Q93050 837 aa14.85□□□□□ -0.03
TUBD1-202ENST00000340993 WNT8BQ93098 351 aa14.85□□□□□ -0.03
TUBD1-202ENST00000340993 USP28Q96RU2 1077 aa14.85□□□□□ -0.03
TUBD1-202ENST00000340993 PPP1R16BQ96T49 567 aa14.85□□□□□ -0.03
TUBD1-202ENST00000340993 WRAP73Q9P2S5 460 aaPredicted RBP14.85□□□□□ -0.03
TUBD1-202ENST00000340993 PRKAG2Q9UGJ0 569 aa14.85□□□□□ -0.03
TUBD1-202ENST00000340993 SEPT9Q9UHD8 586 aaPredicted RBP14.85□□□□□ -0.03
TUBD1-202ENST00000340993 GTF2IRD1Q9UHL9 959 aa14.85□□□□□ -0.03
TUBD1-202ENST00000340993 LAMA3Q16787 3333 aa14.84□□□□□ -0.03
TUBD1-202ENST00000340993 ZBTB39O15060 712 aa14.84□□□□□ -0.03
TUBD1-202ENST00000340993 TBX3O15119 743 aa14.84□□□□□ -0.03
TUBD1-202ENST00000340993 TLR3O15455 904 aaKnown RBP14.84□□□□□ -0.03
TUBD1-202ENST00000340993 INSRRP14616 1297 aa14.84□□□□□ -0.03
TUBD1-202ENST00000340993 NCLP19338 710 aaKnown RBP14.84□□□□□ -0.03
TUBD1-202ENST00000340993 ITGB8P26012 769 aa14.84□□□□□ -0.03
TUBD1-202ENST00000340993 SFNP31947 248 aa14.84□□□□□ -0.03
TUBD1-202ENST00000340993 CYP2C18P33260 490 aa14.84□□□□□ -0.03
TUBD1-202ENST00000340993 CCL23P55773 120 aa14.84□□□□□ -0.03
TUBD1-202ENST00000340993 GRIN1Q05586 938 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms